RNA–Protein interactions for RNA: ENST00000254325.8

RFX1-201, Transcript of regulatory factor X1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX1, Length 4,332 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-201ENST00000254325 CNGA1P29973 690 aa16.97■□□□□ 0.31
RFX1-201ENST00000254325 PRKCEQ02156 737 aa16.97■□□□□ 0.31
RFX1-201ENST00000254325 KCTD16Q68DU8 428 aa16.97■□□□□ 0.31
RFX1-201ENST00000254325 XRRA1Q6P2D8 792 aa16.97■□□□□ 0.31
RFX1-201ENST00000254325 CBWD2Q8IUF1 395 aa16.97■□□□□ 0.31
RFX1-201ENST00000254325 RIN2Q8WYP3 895 aaPredicted RBP16.97■□□□□ 0.31
RFX1-201ENST00000254325 WRAP73Q9P2S5 460 aaPredicted RBP16.97■□□□□ 0.31
RFX1-201ENST00000254325 CYP26A1O43174 497 aa16.97■□□□□ 0.31
RFX1-201ENST00000254325 HPDP32754 393 aaPredicted RBP16.97■□□□□ 0.31
RFX1-201ENST00000254325 SOX10P56693 466 aa16.97■□□□□ 0.31
RFX1-201ENST00000254325 PPP1R7Q15435 360 aa16.97■□□□□ 0.31
RFX1-201ENST00000254325 TPCN2Q8NHX9 752 aa16.97■□□□□ 0.31
RFX1-201ENST00000254325 HDAC7Q8WUI4 952 aa16.97■□□□□ 0.31
RFX1-201ENST00000254325 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.97■□□□□ 0.31
RFX1-201ENST00000254325 FAM107BQ9H098 131 aa16.97■□□□□ 0.31
RFX1-201ENST00000254325 RAB17Q9H0T7 212 aa16.97■□□□□ 0.31
RFX1-201ENST00000254325 ZNF302Q9NR11 478 aa16.97■□□□□ 0.31
RFX1-201ENST00000254325 TBX20Q9UMR3 447 aa16.97■□□□□ 0.31
RFX1-201ENST00000254325 C10orf71Q711Q0 1435 aa16.97■□□□□ 0.31
RFX1-201ENST00000254325 ZNF211Q13398 564 aaPredicted RBP16.96■□□□□ 0.31
RFX1-201ENST00000254325 CEP85LQ5SZL2 805 aa16.96■□□□□ 0.31
RFX1-201ENST00000254325 FAM160B1Q5W0V3 765 aa16.96■□□□□ 0.31
RFX1-201ENST00000254325 MAFGO15525 162 aa16.96■□□□□ 0.31
RFX1-201ENST00000254325 LCA5LO95447 670 aa16.96■□□□□ 0.31
RFX1-201ENST00000254325 NPTX2P47972 431 aa16.96■□□□□ 0.31
RFX1-201ENST00000254325 IRF2BP2Q7Z5L9 587 aa16.96■□□□□ 0.31
RFX1-201ENST00000254325 CCDC105Q8IYK2 499 aa16.96■□□□□ 0.31
RFX1-201ENST00000254325 HPCAL4Q9UM19 191 aa16.96■□□□□ 0.31
RFX1-201ENST00000254325 GOLGA8KD6RF30 607 aa16.96■□□□□ 0.31
RFX1-201ENST00000254325 GPC5P78333 572 aa16.96■□□□□ 0.31
RFX1-201ENST00000254325 MRPS9P82933 396 aaKnown RBP16.96■□□□□ 0.31
RFX1-201ENST00000254325 MEI1Q5TIA1 1274 aa16.96■□□□□ 0.31
RFX1-201ENST00000254325 LMBRD2Q68DH5 695 aaPredicted RBP16.96■□□□□ 0.31
RFX1-201ENST00000254325 CCDC25Q86WR0 208 aa16.96■□□□□ 0.31
RFX1-201ENST00000254325 SAMD3Q8N6K7 520 aa16.96■□□□□ 0.31
RFX1-201ENST00000254325 FBXL13Q8NEE6 735 aa16.96■□□□□ 0.31
RFX1-201ENST00000254325 CLEC4DQ8WXI8 215 aa16.96■□□□□ 0.31
RFX1-201ENST00000254325 TLDC2A0PJX2 215 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 ANKRD62A6NC57 917 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 CCDC188H7C350 402 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 DDX3XO00571 662 aaKnown RBP eCLIP16.95■□□□□ 0.3
RFX1-201ENST00000254325 TRPC3Q13507 836 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 LIN9Q5TKA1 542 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 PHLDB2Q86SQ0 1253 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 PROCA1Q8NCQ7 364 aaPredicted RBP16.95■□□□□ 0.3
RFX1-201ENST00000254325 TMEM143Q96AN5 459 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 SMIM23A6NLE4 172 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 MARK3P27448 753 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 VIPAS39Q9H9C1 493 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 MTRF1LQ9UGC7 380 aaKnown RBP16.95■□□□□ 0.3
RFX1-201ENST00000254325 USTQ9Y2C2 406 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.95■□□□□ 0.3
RFX1-201ENST00000254325 PTPRAP18433 802 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 CTNNA1P35221 906 aaKnown RBP16.95■□□□□ 0.3
RFX1-201ENST00000254325 HOXD13P35453 343 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 ACTR2P61160 394 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 CLUL1Q15846 466 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 GPD1LQ8N335 351 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 TRPC6Q9Y210 931 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 CLEC11AQ9Y240 323 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 ECM2O94769 699 aaPredicted RBP16.95■□□□□ 0.3
RFX1-201ENST00000254325 XKR3Q5GH77 459 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 USP38Q8NB14 1042 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 RDM1Q8NG50 284 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 RBM46Q8TBY0 533 aaKnown RBP16.95■□□□□ 0.3
RFX1-201ENST00000254325 MSTO1Q9BUK6 570 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 ZNF408Q9H9D4 720 aa16.95■□□□□ 0.3
RFX1-201ENST00000254325 MYH7BA7E2Y1 1941 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 TMEM253P0C7T8 217 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 PPP2R5EQ16537 467 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 METTL13Q8N6R0 699 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 MAGOHBQ96A72 148 aaKnown RBP16.94■□□□□ 0.3
RFX1-201ENST00000254325 OTUD5Q96G74 571 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 FBXO40Q9UH90 709 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 MAP2K7O14733 419 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 BUB1BO60566 1050 aaPredicted RBP16.94■□□□□ 0.3
RFX1-201ENST00000254325 DSG3P32926 999 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 PRKCIP41743 596 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 NSFP46459 744 aaKnown RBP16.94■□□□□ 0.3
RFX1-201ENST00000254325 CARSP49589 748 aaKnown RBP16.94■□□□□ 0.3
RFX1-201ENST00000254325 ATP1A2P50993 1020 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 DLG4P78352 724 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 MYBPC2Q14324 1141 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 UGCGQ16739 394 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 PCDHB4Q9Y5E5 795 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 GSTTP1A0A1W2PQM5 241 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 RBAK-RBAKDNI3L0D1 243 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 CALCOCO2Q13137 446 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 KCTD2Q14681 263 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 ZBTB8OSQ8IWT0 167 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 WHAMMQ8TF30 809 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 OSGEPQ9NPF4 335 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 INTUQ9ULD6 942 aa16.94■□□□□ 0.3
RFX1-201ENST00000254325 ALS2CLQ60I27 953 aa16.93■□□□□ 0.3
RFX1-201ENST00000254325 THAP2Q9H0W7 228 aa16.93■□□□□ 0.3
RFX1-201ENST00000254325 CHORDC1Q9UHD1 332 aaPredicted RBP16.93■□□□□ 0.3
RFX1-201ENST00000254325 RIPK3Q9Y572 518 aa16.93■□□□□ 0.3
RFX1-201ENST00000254325 PCDHGC5Q9Y5F6 944 aa16.93■□□□□ 0.3
RFX1-201ENST00000254325 P4HA2O15460 535 aa16.93■□□□□ 0.3
RFX1-201ENST00000254325 KIAA0754O94854 1291 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms