RNA–Protein interactions for RNA: ENST00000252108.7

UBE4A-201, Transcript of ubiquitination factor E4A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE4A, Length 6,103 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-201ENST00000252108 CTNND1O60716 968 aaKnown RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 PALMO75781 387 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 SLITRK3O94933 977 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 CCND1P24385 295 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 CRKP46108 304 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 STRN3Q13033 797 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 EZH2Q15910 746 aaKnown RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 CCDC6Q16204 474 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 TAF12Q16514 161 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 NBPF20Q3BBV1 942 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 AP1ARQ63HQ0 302 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 C15orf39Q6ZRI6 1047 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 CCDC17Q96LX7 622 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 LRRC4CQ9HCJ2 640 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 TMX2Q9Y320 296 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 O00370 1275 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 ASAP2O43150 1006 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 THAP12O43422 761 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 ATP2A2P16615 1042 aaKnown RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 DNA2P51530 1060 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 IL9RQ01113 521 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 CYP27A1Q02318 531 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 DHX9Q08211 1270 aaKnown RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 ADAM9Q13443 819 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 FAM83BQ5T0W9 1011 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 DPY19L2Q6NUT2 758 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 JDP2Q8WYK2 163 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 COL20A1Q9P218 1284 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 MEIS1O00470 390 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 EIF3DO15371 548 aaKnown RBP eCLIP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 DDX3YO15523 660 aaKnown RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 SRGAP2O75044 1071 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 AKAP3O75969 853 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 NEFHP12036 1026 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 EEF2P13639 858 aaKnown RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 UAP1Q16222 522 aaPredicted RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 UBE2SQ16763 222 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 SPOUT1Q5T280 376 aaKnown RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 TRMT10CQ7L0Y3 403 aaKnown RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 CDAN1Q8IWY9 1227 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 TSEN2Q8NCE0 465 aaKnown RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 LNX1Q8TBB1 728 aaPredicted RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 MASTLQ96GX5 879 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 FBXL18Q96ME1 805 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 VCX3BQ9H321 246 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 NLRC4Q9NPP4 1024 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 SENP1Q9P0U3 644 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 SEL1LQ9UBV2 794 aa4.47□□□□□ -1.69
UBE4A-201ENST00000252108 CNOT7Q9UIV1 285 aaKnown RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 NOVA2Q9UNW9 492 aaKnown RBP4.47□□□□□ -1.69
UBE4A-201ENST00000252108 PATJQ8NI35 1801 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 LRRD1A4D1F6 860 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 E7ENQ6 273 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 ZNF185O15231 689 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 MAPK13O15264 365 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 BUB1O43683 1085 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 DCTN3O75935 186 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 MYBPC2Q14324 1141 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 ZFYVE27Q5T4F4 411 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 KCTD16Q68DU8 428 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 NFRKBQ6P4R8 1299 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 ALKBH5Q6P6C2 394 aaKnown RBP4.46□□□□□ -1.69
UBE4A-201ENST00000252108 ZNF571Q7Z3V5 609 aaPredicted RBP4.46□□□□□ -1.69
UBE4A-201ENST00000252108 PNMA8AQ86V59 439 aaPredicted RBP4.46□□□□□ -1.69
UBE4A-201ENST00000252108 RIBC1Q8N443 379 aaPredicted RBP4.46□□□□□ -1.69
UBE4A-201ENST00000252108 UBR7Q8N806 425 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 ARMC2Q8NEN0 867 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 ANO3Q9BYT9 981 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 SLC40A1Q9NP59 571 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 SLC39A2Q9NP94 309 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 CTTNBP2NLQ9P2B4 639 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 PCDHB13Q9Y5F0 798 aa4.46□□□□□ -1.69
UBE4A-201ENST00000252108 POTEFA5A3E0 1075 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 CCT8L1PA6NM43 557 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 PDXKO00764 312 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 FAM189A1O60320 539 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 ZMYND10O75800 440 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 NDUFB10O96000 172 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 POTEIP0CG38 1075 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 TROVE2P10155 538 aaKnown RBP eCLIP4.46□□□□□ -1.7
UBE4A-201ENST00000252108 TNNI2P48788 182 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 DR1Q01658 176 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 SH2D4BQ5SQS7 431 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 DPP8Q6V1X1 898 aaPredicted RBP4.46□□□□□ -1.7
UBE4A-201ENST00000252108 NIPA1Q7RTP0 329 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 ARHGAP18Q8N392 663 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 CFAP61Q8NHU2 1237 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 CYP2W1Q8TAV3 490 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 SEC16BQ96JE7 1060 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 XPO6Q96QU8 1125 aaKnown RBP4.46□□□□□ -1.7
UBE4A-201ENST00000252108 RUSC1Q9BVN2 902 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 VPS33BQ9H267 617 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 PCDHA12Q9UN75 941 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 RPL26L1Q9UNX3 145 aaKnown RBP4.46□□□□□ -1.7
UBE4A-201ENST00000252108 EXOC7Q9UPT5 735 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 COQ4Q9Y3A0 265 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 RABGAP1Q9Y3P9 1069 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 FRMPD2Q68DX3 1309 aaPredicted RBP4.46□□□□□ -1.7
UBE4A-201ENST00000252108 A0A087X0T9 212 aa4.46□□□□□ -1.7
UBE4A-201ENST00000252108 TLDC2A0PJX2 215 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms