RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 EMSYQ7Z589 1322 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 MRPS9P82933 396 aaKnown RBP10.94□□□□□ -0.66
COPB1-201ENST00000249923 QPCTQ16769 361 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 EPC2Q52LR7 807 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 CC2D2BQ6DHV5 1058 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 MMS22LQ6ZRQ5 1243 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 LDHDQ86WU2 507 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 SLC9A9Q8IVB4 645 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 MYCBPAPQ8TBZ2 947 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 EPN3Q9H201 632 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 KCNH7Q9NS40 1196 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 TELO2Q9Y4R8 837 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 ZHX2Q9Y6X8 837 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 RPTORQ8N122 1335 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 ADRB2P07550 413 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 PTENP60484 403 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 BYSLQ13895 437 aaKnown RBP10.94□□□□□ -0.66
COPB1-201ENST00000249923 KCNV1Q6PIU1 500 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 CCDC121Q6ZUS5 278 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 CPLX4Q7Z7G2 160 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 CLEC4DQ8WXI8 215 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 C18orf8Q96DM3 657 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 GMLQ99445 158 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 ODF2LQ9ULJ1 636 aa10.94□□□□□ -0.66
COPB1-201ENST00000249923 TP73O15350 636 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 CALCAP01258 141 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 ADSSP30520 456 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 CTNNA1P35221 906 aaKnown RBP10.93□□□□□ -0.66
COPB1-201ENST00000249923 GCLMP48507 274 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 HSD17B4P51659 736 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 PPP2R5AQ15172 486 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 DUPD1Q68J44 220 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 PADI6Q6TGC4 694 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 ZNF473Q8WTR7 871 aaKnown RBP10.93□□□□□ -0.66
COPB1-201ENST00000249923 KREMEN1Q96MU8 473 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 NACC1Q96RE7 527 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 NOCTQ9UK39 431 aaKnown RBP10.93□□□□□ -0.66
COPB1-201ENST00000249923 STK24Q9Y6E0 443 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 UBE4BO95155 1302 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 ANKRD63C9JTQ0 380 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 CCDC188H7C350 402 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 LMNB1P20700 586 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 FNTAP49354 379 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 MKRN4PQ13434 485 aaPredicted RBP10.93□□□□□ -0.66
COPB1-201ENST00000249923 STYK1Q6J9G0 422 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 LRIG3Q6UXM1 1119 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 NOP9Q86U38 636 aaKnown RBP10.93□□□□□ -0.66
COPB1-201ENST00000249923 SEMA4DQ92854 862 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 BTBD6Q96KE9 485 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 SELENOSQ9BQE4 189 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 MXRA8Q9BRK3 442 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 SLITRK6Q9H5Y7 841 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 VCPKMTQ9H867 229 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 GRHL1Q9NZI5 618 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 SEL1LQ9UBV2 794 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 ZNF70Q9UC06 446 aaPredicted RBP10.93□□□□□ -0.66
COPB1-201ENST00000249923 HERC5Q9UII4 1024 aaKnown RBP10.93□□□□□ -0.66
COPB1-201ENST00000249923 GGT7Q9UJ14 662 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 SYNPO2Q9UMS6 1093 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 HMGB1P1B2RPK0 211 aaPredicted RBP10.93□□□□□ -0.66
COPB1-201ENST00000249923 K7ENM7 598 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 EXOC3O60645 756 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 SGPL1O95470 568 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 PTGER2P43116 358 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 PTGIRP43119 386 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 RARRES1P49788 294 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 IFI16Q16666 785 aaKnown RBP10.93□□□□□ -0.66
COPB1-201ENST00000249923 KCTD17Q8N5Z5 321 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 CCT8L2Q96SF2 557 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 AGPAT1Q99943 283 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 UBE2TQ9NPD8 197 aaPredicted RBP10.93□□□□□ -0.66
COPB1-201ENST00000249923 AMFRQ9UKV5 643 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 ALG6Q9Y672 507 aa10.93□□□□□ -0.66
COPB1-201ENST00000249923 DOCK5Q9H7D0 1870 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 RAD17O75943 681 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 NEBLO76041 1014 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 HNRNPH1P31943 449 aaKnown RBP10.92□□□□□ -0.66
COPB1-201ENST00000249923 PEX5P50542 639 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 PRELID2Q8N945 189 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.92□□□□□ -0.66
COPB1-201ENST00000249923 CD101Q93033 1021 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 CABS1Q96KC9 395 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 PAGR1Q9BTK6 254 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 KIFC3Q9BVG8 833 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 PDGFDQ9GZP0 370 aaPredicted RBP10.92□□□□□ -0.66
COPB1-201ENST00000249923 FRMD4BQ9Y2L6 1034 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 PPP1R12BO60237 982 aaPredicted RBP10.92□□□□□ -0.66
COPB1-201ENST00000249923 ATP9AO75110 1047 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 PPFIA2O75334 1257 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 MYCNP04198 464 aaPredicted RBP10.92□□□□□ -0.66
COPB1-201ENST00000249923 CAP2P40123 477 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 DHX9Q08211 1270 aaKnown RBP10.92□□□□□ -0.66
COPB1-201ENST00000249923 SLC47A2Q86VL8 602 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 VPS36Q86VN1 386 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 NLRP14Q86W24 1093 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 SYCE1Q8N0S2 351 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 EPS8L1Q8TE68 723 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 POP1Q99575 1024 aaKnown RBP10.92□□□□□ -0.66
COPB1-201ENST00000249923 TMEM117Q9H0C3 514 aa10.92□□□□□ -0.66
COPB1-201ENST00000249923 DEFB129Q9H1M3 183 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms