RNA–Protein interactions for RNA: ENST00000244302.8

HIF3A-201, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-201ENST00000244302 C1QTNF8P60827 252 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 RBL2Q08999 1139 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 KCNA10Q16322 511 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 VWA3BQ502W6 1294 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 MAP3K21Q5TCX8 1036 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 NFRKBQ6P4R8 1299 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 CBWD2Q8IUF1 395 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 TRIM59Q8IWR1 403 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 ELMO3Q96BJ8 720 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 NDST4Q9H3R1 872 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 C17orf75Q9HAS0 396 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 IFT122Q9HBG6 1241 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 KCND1Q9NSA2 647 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 HSPBP1Q9NZL4 362 aa14.13□□□□□ -0.15
HIF3A-201ENST00000244302 CBFA2T2O43439 604 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 EXOC3O60645 756 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 HMGCRP04035 888 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 HOXD10P28358 340 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 SPAG1Q07617 926 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 TBX2Q13207 712 aaPredicted RBP14.12□□□□□ -0.15
HIF3A-201ENST00000244302 KIZQ2M2Z5 673 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 DCAF17Q5H9S7 520 aaPredicted RBP14.12□□□□□ -0.15
HIF3A-201ENST00000244302 SCARA3Q6AZY7 606 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 HS2ST1Q7LGA3 356 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 DNAJC5GQ8N7S2 189 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 BICD1Q96G01 975 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 ERO1AQ96HE7 468 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 CEP63Q96MT8 703 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 POP1Q99575 1024 aaKnown RBP14.12□□□□□ -0.15
HIF3A-201ENST00000244302 TMEM206Q9H813 350 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 Q9Y3F1 56 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 GRIN2DO15399 1336 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 HNRNPDLO14979 420 aaKnown RBP14.12□□□□□ -0.15
HIF3A-201ENST00000244302 ASGR1P07306 291 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 ADRB2P07550 413 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 HARSP12081 509 aaKnown RBP14.12□□□□□ -0.15
HIF3A-201ENST00000244302 TNNT1P13805 278 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 FXR1P51114 621 aaKnown RBP eCLIP14.12□□□□□ -0.15
HIF3A-201ENST00000244302 GSDMDP57764 484 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 KCNMA1Q12791 1236 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 NBPF20Q3BBV1 942 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 SPECC1LQ69YQ0 1117 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 PPP4R3CPQ6ZMV5 832 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 STXBP4Q6ZWJ1 553 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 WNT8BQ93098 351 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 CTAGE1Q96RT6 745 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.12□□□□□ -0.15
HIF3A-201ENST00000244302 KAT6AQ92794 2004 aa14.12□□□□□ -0.15
HIF3A-201ENST00000244302 CASP8AP2Q9UKL3 1982 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 INO80B-WBP1J3KQ70 363 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 MSCO60682 206 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 ACOT2P49753 483 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 NLRP11P59045 1033 aaKnown RBP14.11□□□□□ -0.15
HIF3A-201ENST00000244302 ADAM17P78536 824 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 KCNH2Q12809 1159 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 MTFR1Q15390 333 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 FILIP1LQ4L180 1135 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 TCERG1LQ5VWI1 586 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 LHX8Q68G74 356 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 CCSAPQ6IQ19 270 aaPredicted RBP14.11□□□□□ -0.15
HIF3A-201ENST00000244302 ZBTB33Q86T24 672 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 FAM186BQ8IYM0 893 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 TMEM130Q8N3G9 435 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 DNAJB3Q8WWF6 145 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 INO80BQ9C086 356 aaPredicted RBP14.11□□□□□ -0.15
HIF3A-201ENST00000244302 WBP1LQ9NX94 342 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 ANKFY1Q9P2R3 1169 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 GYPCP04921 128 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 CASP14P31944 242 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 GRK4P32298 578 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 MAN2A1Q16706 1144 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 C1orf220Q5T0J3 134 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 FOXR2Q6PJQ5 311 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 FAM114A1Q8IWE2 563 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 ANKRD20A12PQ8NF67 263 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 POMGNT1Q8WZA1 660 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 TSC1Q92574 1164 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 SLC35C1Q96A29 364 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 OSBPL7Q9BZF2 842 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 CCDC113Q9H0I3 377 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 AGPAT5Q9NUQ2 364 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 IMPACTQ9P2X3 320 aa14.11□□□□□ -0.15
HIF3A-201ENST00000244302 ARMCX3Q9UH62 379 aaPredicted RBP14.11□□□□□ -0.15
HIF3A-201ENST00000244302 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.11□□□□□ -0.15
HIF3A-201ENST00000244302 UBE4BO95155 1302 aa14.1□□□□□ -0.15
HIF3A-201ENST00000244302 KIF2AO00139 706 aaPredicted RBP14.1□□□□□ -0.15
HIF3A-201ENST00000244302 ACTN1P12814 892 aa14.1□□□□□ -0.15
HIF3A-201ENST00000244302 RPL13P26373 211 aaKnown RBP14.1□□□□□ -0.15
HIF3A-201ENST00000244302 EEF1DP3Q658K8 133 aa14.1□□□□□ -0.15
HIF3A-201ENST00000244302 RETREG2Q8NC44 543 aa14.1□□□□□ -0.15
HIF3A-201ENST00000244302 KLHDC9Q8NEP7 349 aa14.1□□□□□ -0.15
HIF3A-201ENST00000244302 TCP11Q8WWU5 503 aa14.1□□□□□ -0.15
HIF3A-201ENST00000244302 CPB2Q96IY4 423 aa14.1□□□□□ -0.15
HIF3A-201ENST00000244302 C16orf45Q96MC5 204 aaPredicted RBP14.1□□□□□ -0.15
HIF3A-201ENST00000244302 FAM213AQ9BRX8 229 aa14.1□□□□□ -0.15
HIF3A-201ENST00000244302 UPF3AQ9H1J1 476 aaKnown RBP14.1□□□□□ -0.15
HIF3A-201ENST00000244302 FAM207AQ9NSI2 230 aaPredicted RBP14.1□□□□□ -0.15
HIF3A-201ENST00000244302 SAGE1Q9NXZ1 904 aa14.1□□□□□ -0.15
HIF3A-201ENST00000244302 DDX20Q9UHI6 824 aaKnown RBP14.1□□□□□ -0.15
HIF3A-201ENST00000244302 FGFR1OPO95684 399 aaKnown RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms