RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 GABBR1Q9UBS5 961 aa14.47□□□□□ -0.09
SLIRP-201ENST00000238688 DDX41Q9UJV9 622 aaKnown RBP14.47□□□□□ -0.09
SLIRP-201ENST00000238688 NPHP3-ACAD11A0A0J9YXS1 232 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 GTPBP10A4D1E9 387 aaKnown RBP14.46□□□□□ -0.09
SLIRP-201ENST00000238688 BACH1O14867 736 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 KIAA0391O15091 583 aaKnown RBP14.46□□□□□ -0.09
SLIRP-201ENST00000238688 LGR5O75473 907 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 OATP04181 439 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 EPB41P11171 864 aaKnown RBP14.46□□□□□ -0.09
SLIRP-201ENST00000238688 NR2F2P24468 414 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 GTF2BQ00403 316 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 PRKCEQ02156 737 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 TBC1D8BQ0IIM8 1120 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 DMP1Q13316 513 aaPredicted RBP14.46□□□□□ -0.09
SLIRP-201ENST00000238688 ADAM9Q13443 819 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 LY6KQ17RY6 165 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 TSR1Q2NL82 804 aaKnown RBP14.46□□□□□ -0.09
SLIRP-201ENST00000238688 NBPF20Q3BBV1 942 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 VWA3BQ502W6 1294 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 CELF3Q5SZQ8 465 aaKnown RBP14.46□□□□□ -0.09
SLIRP-201ENST00000238688 ZNF697Q5TEC3 545 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 SEPT14Q6ZU15 432 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 ANO5Q75V66 913 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 FMNL3Q8IVF7 1028 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 TRIM59Q8IWR1 403 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 TMEM199Q8N511 208 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 ZNF397Q8NF99 534 aaPredicted RBP14.46□□□□□ -0.09
SLIRP-201ENST00000238688 ACCSQ96QU6 501 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 FIZ1Q96SL8 496 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 VPS16Q9H269 839 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 NDST4Q9H3R1 872 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 HIPK3Q9H422 1215 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 AZI2Q9H6S1 392 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 IL23AQ9NPF7 189 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 CYP26B1Q9NR63 512 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 TAB2Q9NYJ8 693 aa14.46□□□□□ -0.09
SLIRP-201ENST00000238688 SIP14410 1827 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 PTPRSQ13332 1948 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 GRXCR1A8MXD5 290 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 MFAP3LO75121 409 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 STBD1O95210 358 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 MMP3P08254 477 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 CYP2C9P11712 490 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 NCKAP1LP55160 1127 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 CCL23P55773 120 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 MCCD1P59942 119 aaPredicted RBP14.45□□□□□ -0.1
SLIRP-201ENST00000238688 LAMC2Q13753 1193 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 NOLC1Q14978 699 aaKnown RBP eCLIP14.45□□□□□ -0.1
SLIRP-201ENST00000238688 CCDC40Q4G0X9 1142 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 MIIPQ5JXC2 388 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 SWSAP1Q6NVH7 229 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 CYFIP1Q7L576 1253 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 CCDC60Q8IWA6 550 aaPredicted RBP14.45□□□□□ -0.1
SLIRP-201ENST00000238688 DAW1Q8N136 415 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 TC2NQ8N9U0 490 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 AFG1LQ8WV93 481 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 BBXQ8WY36 941 aaPredicted RBP14.45□□□□□ -0.1
SLIRP-201ENST00000238688 KAT2BQ92831 832 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 HPS3Q969F9 1004 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 ZFP91Q96JP5 570 aaPredicted RBP14.45□□□□□ -0.1
SLIRP-201ENST00000238688 CEP170P1Q96L14 293 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 IFT74Q96LB3 600 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 CDX2Q99626 313 aaPredicted RBP14.45□□□□□ -0.1
SLIRP-201ENST00000238688 MLXIPQ9HAP2 919 aa14.45□□□□□ -0.1
SLIRP-201ENST00000238688 CXXC1Q9P0U4 656 aaPredicted RBP14.45□□□□□ -0.1
SLIRP-201ENST00000238688 ARMCX3Q9UH62 379 aaPredicted RBP14.45□□□□□ -0.1
SLIRP-201ENST00000238688 CUL9Q8IWT3 2517 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.44□□□□□ -0.1
SLIRP-201ENST00000238688 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.44□□□□□ -0.1
SLIRP-201ENST00000238688 RSPH10B2B2RC85 870 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 TEX33O43247 280 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 ZSCAN12O43309 604 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 ZNF862O60290 1169 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 USO1O60763 962 aaKnown RBP14.44□□□□□ -0.1
SLIRP-201ENST00000238688 GGPS1O95749 300 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 NR3C1P04150 777 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 RSPH10BP0C881 870 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 CDK17Q00537 523 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 RAD51AP2Q09MP3 1159 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 UGCGQ16739 394 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 HSP90AA4PQ58FG1 418 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 SMYD5Q6GMV2 418 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 NFRKBQ6P4R8 1299 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 USP37Q86T82 979 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 TMTC1Q8IUR5 882 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 SLC7A3Q8WY07 619 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 HERVK_113Q902F9 699 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 SCLYQ96I15 445 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 BAG1Q99933 345 aaPredicted RBP14.44□□□□□ -0.1
SLIRP-201ENST00000238688 DHX33Q9H6R0 707 aaKnown RBP14.44□□□□□ -0.1
SLIRP-201ENST00000238688 DMAC2Q9NW81 257 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 TBC1D7Q9P0N9 293 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 CAPN11Q9UMQ6 739 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 FRMD4BQ9Y2L6 1034 aa14.44□□□□□ -0.1
SLIRP-201ENST00000238688 LUC7L2Q9Y383 392 aaKnown RBP14.44□□□□□ -0.1
SLIRP-201ENST00000238688 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.44□□□□□ -0.1
SLIRP-201ENST00000238688 K7ENM7 598 aa14.43□□□□□ -0.1
SLIRP-201ENST00000238688 NOP56O00567 594 aaKnown RBP14.43□□□□□ -0.1
SLIRP-201ENST00000238688 KPNA6O60684 536 aa14.43□□□□□ -0.1
SLIRP-201ENST00000238688 GH1P01241 217 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms