RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 GPBP1Q86WP2 473 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 KCTD17Q8N5Z5 321 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 CASD1Q96PB1 797 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 TRAIPQ9BWF2 469 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 CCDC39Q9UFE4 941 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 PCDHB2Q9Y5E7 798 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 TCHHQ07283 1943 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 KIAA1671Q9BY89 1806 aa14.01□□□□□ -0.17
LSM5-201ENST00000223084 EOMESO95936 686 aa14□□□□□ -0.17
LSM5-201ENST00000223084 EDN1P05305 212 aa14□□□□□ -0.17
LSM5-201ENST00000223084 PRKCBP05771 671 aa14□□□□□ -0.17
LSM5-201ENST00000223084 AXLP30530 894 aa14□□□□□ -0.17
LSM5-201ENST00000223084 TXLNAP40222 546 aa14□□□□□ -0.17
LSM5-201ENST00000223084 NPTX2P47972 431 aa14□□□□□ -0.17
LSM5-201ENST00000223084 NAALADL2Q58DX5 795 aa14□□□□□ -0.17
LSM5-201ENST00000223084 RRAGBQ5VZM2 374 aa14□□□□□ -0.17
LSM5-201ENST00000223084 NOTUMQ6P988 496 aa14□□□□□ -0.17
LSM5-201ENST00000223084 LRRC55Q6ZSA7 311 aa14□□□□□ -0.17
LSM5-201ENST00000223084 MICALL1Q8N3F8 863 aa14□□□□□ -0.17
LSM5-201ENST00000223084 PDILTQ8N807 584 aa14□□□□□ -0.17
LSM5-201ENST00000223084 MAFAQ8NHW3 353 aaPredicted RBP14□□□□□ -0.17
LSM5-201ENST00000223084 HELQQ8TDG4 1101 aa14□□□□□ -0.17
LSM5-201ENST00000223084 PPM1EQ8WY54 764 aa14□□□□□ -0.17
LSM5-201ENST00000223084 CLP1Q92989 425 aaKnown RBP14□□□□□ -0.17
LSM5-201ENST00000223084 DRC1Q96MC2 740 aa14□□□□□ -0.17
LSM5-201ENST00000223084 TMEM117Q9H0C3 514 aa14□□□□□ -0.17
LSM5-201ENST00000223084 CCDC113Q9H0I3 377 aa14□□□□□ -0.17
LSM5-201ENST00000223084 C2orf40Q9H1Z8 148 aa14□□□□□ -0.17
LSM5-201ENST00000223084 FZD8Q9H461 694 aa14□□□□□ -0.17
LSM5-201ENST00000223084 TYW1Q9NV66 732 aaKnown RBP14□□□□□ -0.17
LSM5-201ENST00000223084 PRMT7Q9NVM4 692 aaPredicted RBP14□□□□□ -0.17
LSM5-201ENST00000223084 COL4A4P53420 1690 aaPredicted RBP14□□□□□ -0.17
LSM5-201ENST00000223084 RALGAPA2Q2PPJ7 1873 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 SLC16A4O15374 487 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 HOXA2O43364 376 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 CUTAO60888 179 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 ZNF623O75123 536 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 NPTXRO95502 500 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 SKIP12755 728 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 NCLP19338 710 aaKnown RBP13.99□□□□□ -0.17
LSM5-201ENST00000223084 DDIT3P35638 169 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 BMPR1AP36894 532 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 RAB27AP51159 221 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 NCBP1Q09161 790 aaKnown RBP13.99□□□□□ -0.17
LSM5-201ENST00000223084 DMP1Q13316 513 aaPredicted RBP13.99□□□□□ -0.17
LSM5-201ENST00000223084 GPM6BQ13491 265 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 PCBP1Q15365 356 aaKnown RBP eCLIP13.99□□□□□ -0.17
LSM5-201ENST00000223084 CCDC85BQ15834 202 aaPredicted RBP13.99□□□□□ -0.17
LSM5-201ENST00000223084 MAPK6Q16659 721 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 FAM187BQ17R55 369 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 AXDND1Q5T1B0 1012 aaPredicted RBP13.99□□□□□ -0.17
LSM5-201ENST00000223084 SPOUT1Q5T280 376 aaKnown RBP13.99□□□□□ -0.17
LSM5-201ENST00000223084 ATL3Q6DD88 541 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 SHC4Q6S5L8 630 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 ABI1Q8IZP0 508 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 SMG8Q8ND04 991 aaKnown RBP13.99□□□□□ -0.17
LSM5-201ENST00000223084 LARP4BQ92615 738 aaKnown RBP13.99□□□□□ -0.17
LSM5-201ENST00000223084 SAMD11Q96NU1 681 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 REEP2Q9BRK0 252 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 TIPINQ9BVW5 301 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 APOL6Q9BWW8 343 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 CWH43Q9H720 699 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 KMT5AQ9NQR1 393 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 KCND2Q9NZV8 630 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 CFAP45Q9UL16 551 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 PCDHA7Q9UN72 937 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 HES2Q9Y543 173 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 MTCH2Q9Y6C9 303 aa13.99□□□□□ -0.17
LSM5-201ENST00000223084 A0A1B0GUA9 196 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 OFD1O75665 1012 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 PLS3P13797 630 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 ME1P48163 572 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 AFF1P51825 1210 aaKnown RBP13.98□□□□□ -0.17
LSM5-201ENST00000223084 EFNA5P52803 228 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 PRPF4BQ13523 1007 aaKnown RBP13.98□□□□□ -0.17
LSM5-201ENST00000223084 GIT2Q14161 759 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 TMEM132AQ24JP5 1023 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 NT5DC1Q5TFE4 455 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 AGMOQ6ZNB7 445 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 TAS1R3Q7RTX0 852 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 MRPL10Q7Z7H8 261 aaKnown RBP13.98□□□□□ -0.17
LSM5-201ENST00000223084 KCNG4Q8TDN1 519 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 PRIMPOLQ96LW4 560 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 ARHGAP28Q9P2N2 729 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 STK17AQ9UEE5 414 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 RCOR1Q9UKL0 485 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 INPP5FQ9Y2H2 1132 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 IPPQ9Y573 584 aa13.98□□□□□ -0.17
LSM5-201ENST00000223084 CNTNAP2Q9UHC6 1331 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 TRANK1O15050 2925 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 C5orf67F2Z3F1 127 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 H3BNC9 293 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 K7ERI5 159 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 ACKR2O00590 384 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 GTPBP6O43824 516 aaPredicted RBP13.97□□□□□ -0.17
LSM5-201ENST00000223084 CSPG5O95196 566 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 KRT18P05783 430 aaKnown RBP13.97□□□□□ -0.17
LSM5-201ENST00000223084 ITGA4P13612 1032 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 PBX3P40426 434 aa13.97□□□□□ -0.17
LSM5-201ENST00000223084 STAT6P42226 847 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms