RNA–Protein interactions for RNA: ENST00000219837.11

KNOP1-201, Transcript of lysine rich nucleolar protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KNOP1, Length 6,432 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1-201ENST00000219837 TMEM35BQ8NCS4 154 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 ABTB1Q969K4 478 aaPredicted RBP11.8□□□□□ -0.52
KNOP1-201ENST00000219837 TTC7AQ9ULT0 858 aaPredicted RBP11.8□□□□□ -0.52
KNOP1-201ENST00000219837 TRIM33Q9UPN9 1127 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 LAMC1P11047 1609 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 UPP2O95045 317 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 PRR29P0C7W0 189 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 ALS2CLQ60I27 953 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 RNF168Q8IYW5 571 aaPredicted RBP11.8□□□□□ -0.52
KNOP1-201ENST00000219837 PGBD3Q8N328 593 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 ZC3H15Q8WU90 426 aaKnown RBP11.8□□□□□ -0.52
KNOP1-201ENST00000219837 RMDN1Q96DB5 314 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 LXNQ9BS40 222 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 DDX56Q9NY93 547 aaKnown RBP11.8□□□□□ -0.52
KNOP1-201ENST00000219837 TJP2Q9UDY2 1190 aa11.8□□□□□ -0.52
KNOP1-201ENST00000219837 APOBEC2Q9Y235 224 aaKnown RBP11.8□□□□□ -0.52
KNOP1-201ENST00000219837 PIN4Q9Y237 131 aaKnown RBP11.8□□□□□ -0.52
KNOP1-201ENST00000219837 POTEFA5A3E0 1075 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 SYCE1LA8MT33 242 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 POTEIP0CG38 1075 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 MTMR2Q13614 643 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 GRM4Q14833 912 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 POTEGQ6S5H5 508 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 POTEEQ6S8J3 1075 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 XXYLT1Q8NBI6 393 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 WDR48Q8TAF3 677 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 ENOX1Q8TC92 643 aaKnown RBP11.79□□□□□ -0.52
KNOP1-201ENST00000219837 RNF25Q96BH1 459 aaPredicted RBP11.79□□□□□ -0.52
KNOP1-201ENST00000219837 DCUN1D1Q96GG9 259 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 SPON2Q9BUD6 331 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 RNF14Q9UBS8 474 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 SYNGAP1Q96PV0 1343 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 ARHGAP10A1A4S6 786 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 PFDN1O60925 122 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 CYBBP04839 570 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 MYBL1P10243 752 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 PPHLN1Q8NEY8 458 aaKnown RBP11.79□□□□□ -0.52
KNOP1-201ENST00000219837 ZNF507Q8TCN5 953 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 ABHD8Q96I13 439 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 CALR3Q96L12 384 aaKnown RBP11.79□□□□□ -0.52
KNOP1-201ENST00000219837 LRRC37BQ96QE4 947 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 EIF2AK1Q9BQI3 630 aaKnown RBP11.79□□□□□ -0.52
KNOP1-201ENST00000219837 MAGI2Q86UL8 1455 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 CHD1O14646 1710 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 SDC4P31431 198 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 SPARCL1Q14515 664 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 NAALADL2Q58DX5 795 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 NUDT18Q6ZVK8 323 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 SYT2Q8N9I0 419 aaPredicted RBP11.79□□□□□ -0.52
KNOP1-201ENST00000219837 TTC13Q8NBP0 860 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 C11orf70Q9BRQ4 267 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 CD209Q9NNX6 404 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 SENP1Q9P0U3 644 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 SPAG7O75391 227 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 NR1D1P20393 614 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 ARL4DP49703 201 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 ZNF235Q14590 738 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 DHX35Q9H5Z1 703 aaKnown RBP11.79□□□□□ -0.52
KNOP1-201ENST00000219837 STAP1Q9ULZ2 295 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 PODXLO00592 558 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 KRT37O76014 449 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 P4HBP07237 508 aaKnown RBP11.79□□□□□ -0.52
KNOP1-201ENST00000219837 HMBSP08397 361 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 PRDX5P30044 214 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 EIF3BP55884 814 aaKnown RBP11.79□□□□□ -0.52
KNOP1-201ENST00000219837 SPP2Q13103 211 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 KLHL38Q2WGJ6 581 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 TAGAPQ8N103 731 aa11.79□□□□□ -0.52
KNOP1-201ENST00000219837 ASB14A6NK59 587 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 LRRC53A6NM62 1247 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 TADA2AO75478 443 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 ARIH2O95376 493 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 ITPRIPL1Q6GPH6 555 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 ALKBH5Q6P6C2 394 aaKnown RBP11.78□□□□□ -0.52
KNOP1-201ENST00000219837 ATXN7L3BQ96GX2 97 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 PPP1R36Q96LQ0 422 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 PLEKHA5Q9HAU0 1116 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 PPARGC1AQ9UBK2 798 aaKnown RBP11.78□□□□□ -0.52
KNOP1-201ENST00000219837 SLC9A2Q9UBY0 812 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 ZFP69BQ9UJL9 534 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 DOLKQ9UPQ8 538 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 TADA3O75528 432 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 DCTN3O75935 186 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 CYP2E1P05181 493 aaPredicted RBP11.78□□□□□ -0.52
KNOP1-201ENST00000219837 CASP1P29466 404 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 KYAT1Q16773 422 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 EML4Q9HC35 981 aaKnown RBP11.78□□□□□ -0.52
KNOP1-201ENST00000219837 RBAKQ9NYW8 714 aaPredicted RBP11.78□□□□□ -0.52
KNOP1-201ENST00000219837 SPDYE5A6NIY4 337 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 MFAP3LO75121 409 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 HLA-DPA1P20036 260 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 QARSP47897 775 aaKnown RBP11.78□□□□□ -0.52
KNOP1-201ENST00000219837 PRAMEP78395 509 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 KNOP1Q1ED39 458 aaKnown RBP11.78□□□□□ -0.52
KNOP1-201ENST00000219837 GRAMD1BQ3KR37 738 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 SPDYE7PQ495Y7 208 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 FAM102AQ5T9C2 384 aaPredicted RBP11.78□□□□□ -0.52
KNOP1-201ENST00000219837 CDKL3Q8IVW4 592 aaPredicted RBP11.78□□□□□ -0.52
KNOP1-201ENST00000219837 SLC44A5Q8NCS7 719 aa11.78□□□□□ -0.52
KNOP1-201ENST00000219837 NARFQ9UHQ1 456 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms