RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 CASP10Q92851 521 aa16.73■□□□□ 0.27
UPK3A-201ENST00000216211 IGSF21Q96ID5 467 aa16.73■□□□□ 0.27
UPK3A-201ENST00000216211 EIF2AK1Q9BQI3 630 aaKnown RBP16.73■□□□□ 0.27
UPK3A-201ENST00000216211 ZBP1Q9H171 429 aa16.73■□□□□ 0.27
UPK3A-201ENST00000216211 KMT2EQ8IZD2 1858 aa16.72■□□□□ 0.27
UPK3A-201ENST00000216211 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.72■□□□□ 0.27
UPK3A-201ENST00000216211 ASAP2O43150 1006 aa16.72■□□□□ 0.27
UPK3A-201ENST00000216211 B4GALT3O60512 393 aa16.72■□□□□ 0.27
UPK3A-201ENST00000216211 GALTP07902 379 aa16.72■□□□□ 0.27
UPK3A-201ENST00000216211 HOXB8P17481 243 aaPredicted RBP16.72■□□□□ 0.27
UPK3A-201ENST00000216211 HOXA11P31270 313 aaPredicted RBP16.72■□□□□ 0.27
UPK3A-201ENST00000216211 SLC11A1P49279 550 aa16.72■□□□□ 0.27
UPK3A-201ENST00000216211 ZXDAP98168 799 aa16.72■□□□□ 0.27
UPK3A-201ENST00000216211 BMS1Q14692 1282 aaKnown RBP16.72■□□□□ 0.27
UPK3A-201ENST00000216211 CALCRLQ16602 461 aa16.72■□□□□ 0.27
UPK3A-201ENST00000216211 MRPL10Q7Z7H8 261 aaKnown RBP16.72■□□□□ 0.27
UPK3A-201ENST00000216211 DDX53Q86TM3 631 aaKnown RBP16.72■□□□□ 0.27
UPK3A-201ENST00000216211 DIS3L2Q8IYB7 885 aaKnown RBP16.72■□□□□ 0.27
UPK3A-201ENST00000216211 URGCPQ8TCY9 931 aa16.72■□□□□ 0.27
UPK3A-201ENST00000216211 RSAD1Q9HA92 442 aa16.72■□□□□ 0.27
UPK3A-201ENST00000216211 XPNPEP1Q9NQW7 623 aa16.72■□□□□ 0.27
UPK3A-201ENST00000216211 PCDHA12Q9UN75 941 aa16.72■□□□□ 0.27
UPK3A-201ENST00000216211 MYO10Q9HD67 2058 aa16.72■□□□□ 0.27
UPK3A-201ENST00000216211 TMEM221A6NGB7 291 aa16.71■□□□□ 0.27
UPK3A-201ENST00000216211 M0R296 226 aa16.71■□□□□ 0.27
UPK3A-201ENST00000216211 DDHD2O94830 711 aa16.71■□□□□ 0.27
UPK3A-201ENST00000216211 CTSAP10619 480 aa16.71■□□□□ 0.27
UPK3A-201ENST00000216211 TXKP42681 527 aa16.71■□□□□ 0.27
UPK3A-201ENST00000216211 AFF1P51825 1210 aaKnown RBP16.71■□□□□ 0.27
UPK3A-201ENST00000216211 ST3GAL1Q11201 340 aa16.71■□□□□ 0.27
UPK3A-201ENST00000216211 TPRNQ4KMQ1 711 aa16.71■□□□□ 0.27
UPK3A-201ENST00000216211 TRIM67Q6ZTA4 783 aa16.71■□□□□ 0.27
UPK3A-201ENST00000216211 MFSD14AQ96MC6 490 aa16.71■□□□□ 0.27
UPK3A-201ENST00000216211 TTC12Q9H892 705 aaPredicted RBP16.71■□□□□ 0.27
UPK3A-201ENST00000216211 PLXNA3P51805 1871 aa16.71■□□□□ 0.27
UPK3A-201ENST00000216211 DENND4AQ7Z401 1863 aa16.71■□□□□ 0.27
UPK3A-201ENST00000216211 C2orf16Q68DN1 1984 aa16.71■□□□□ 0.27
UPK3A-201ENST00000216211 A0A087WWV3 80 aa16.7■□□□□ 0.26
UPK3A-201ENST00000216211 CARNS1A5YM72 827 aa16.7■□□□□ 0.26
UPK3A-201ENST00000216211 NEMFO60524 1076 aa16.7■□□□□ 0.26
UPK3A-201ENST00000216211 EIF5BO60841 1220 aaKnown RBP16.7■□□□□ 0.26
UPK3A-201ENST00000216211 ERLIN2O94905 339 aa16.7■□□□□ 0.26
UPK3A-201ENST00000216211 POMCP01189 267 aa16.7■□□□□ 0.26
UPK3A-201ENST00000216211 TRIM29Q14134 588 aa16.7■□□□□ 0.26
UPK3A-201ENST00000216211 TMEM87AQ8NBN3 555 aa16.7■□□□□ 0.26
UPK3A-201ENST00000216211 SMG8Q8ND04 991 aaKnown RBP16.7■□□□□ 0.26
UPK3A-201ENST00000216211 CPB2Q96IY4 423 aa16.7■□□□□ 0.26
UPK3A-201ENST00000216211 FBXL18Q96ME1 805 aa16.7■□□□□ 0.26
UPK3A-201ENST00000216211 FAM193BQ96PV7 902 aaPredicted RBP16.7■□□□□ 0.26
UPK3A-201ENST00000216211 HSD17B14Q9BPX1 270 aa16.7■□□□□ 0.26
UPK3A-201ENST00000216211 VN1R3Q9BXE9 311 aa16.7■□□□□ 0.26
UPK3A-201ENST00000216211 POMKQ9H5K3 350 aa16.7■□□□□ 0.26
UPK3A-201ENST00000216211 CNTNAP2Q9UHC6 1331 aa16.7■□□□□ 0.26
UPK3A-201ENST00000216211 TSPAN1O60635 241 aa16.69■□□□□ 0.26
UPK3A-201ENST00000216211 LYPLA2O95372 231 aa16.69■□□□□ 0.26
UPK3A-201ENST00000216211 SSBP05455 408 aaKnown RBP eCLIP16.69■□□□□ 0.26
UPK3A-201ENST00000216211 WEE2P0C1S8 567 aa16.69■□□□□ 0.26
UPK3A-201ENST00000216211 EPCAMP16422 314 aa16.69■□□□□ 0.26
UPK3A-201ENST00000216211 NCLP19338 710 aaKnown RBP16.69■□□□□ 0.26
UPK3A-201ENST00000216211 PTENP60484 403 aa16.69■□□□□ 0.26
UPK3A-201ENST00000216211 CAPSQ13938 189 aa16.69■□□□□ 0.26
UPK3A-201ENST00000216211 MXD4Q14582 209 aaPredicted RBP16.69■□□□□ 0.26
UPK3A-201ENST00000216211 RARS2Q5T160 578 aaKnown RBP16.69■□□□□ 0.26
UPK3A-201ENST00000216211 CES5AQ6NT32 575 aa16.69■□□□□ 0.26
UPK3A-201ENST00000216211 KANK3Q6NY19 840 aa16.69■□□□□ 0.26
UPK3A-201ENST00000216211 C12orf76Q8N812 135 aaPredicted RBP16.69■□□□□ 0.26
UPK3A-201ENST00000216211 ASAP3Q8TDY4 903 aa16.69■□□□□ 0.26
UPK3A-201ENST00000216211 PIGOQ8TEQ8 1089 aa16.69■□□□□ 0.26
UPK3A-201ENST00000216211 MTMR9Q96QG7 549 aa16.69■□□□□ 0.26
UPK3A-201ENST00000216211 EIF2AQ9BY44 585 aaKnown RBP16.69■□□□□ 0.26
UPK3A-201ENST00000216211 ADAM7Q9H2U9 754 aa16.69■□□□□ 0.26
UPK3A-201ENST00000216211 UPF2Q9HAU5 1272 aaKnown RBP16.69■□□□□ 0.26
UPK3A-201ENST00000216211 ANKEF1Q9NU02 776 aa16.69■□□□□ 0.26
UPK3A-201ENST00000216211 IRAK3Q9Y616 596 aa16.69■□□□□ 0.26
UPK3A-201ENST00000216211 POTEMA6NI47 508 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 INO80B-WBP1J3KQ70 363 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 DGAT1O75907 488 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 ITGA4P13612 1032 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 ATP2B1P20020 1258 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 GUCY1B3Q02153 619 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 ITIH3Q06033 890 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 GIT2Q14161 759 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 TFDP1Q14186 410 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 PTPN14Q15678 1187 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 PTPN21Q16825 1174 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 BMP8AQ7Z5Y6 402 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 PBXIP1Q96AQ6 731 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 CCDC43Q96MW1 224 aaKnown RBP16.68■□□□□ 0.26
UPK3A-201ENST00000216211 IPO9Q96P70 1041 aaKnown RBP16.68■□□□□ 0.26
UPK3A-201ENST00000216211 KCNH6Q9H252 994 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 TMEM60Q9H2L4 133 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 RNF39Q9H2S5 420 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 KANSL3Q9P2N6 904 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 FAN1Q9Y2M0 1017 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 HES2Q9Y543 173 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 IPPQ9Y573 584 aa16.68■□□□□ 0.26
UPK3A-201ENST00000216211 NRP1O14786 923 aa16.67■□□□□ 0.26
UPK3A-201ENST00000216211 ALDH2P05091 517 aa16.67■□□□□ 0.26
UPK3A-201ENST00000216211 GLRA2P23416 452 aa16.67■□□□□ 0.26
UPK3A-201ENST00000216211 AXLP30530 894 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms