RNA–Protein interactions for RNA: ENST00000016946.7

RGPD5-201, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGPD5, Length 7,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-201ENST00000016946 IL1R1P14778 569 aa11.85□□□□□ -0.51
RGPD5-201ENST00000016946 SF3A3Q12874 501 aaKnown RBP eCLIP11.85□□□□□ -0.51
RGPD5-201ENST00000016946 EFHC2Q5JST6 749 aa11.85□□□□□ -0.51
RGPD5-201ENST00000016946 NBPF12Q5TAG4 269 aaPredicted RBP11.85□□□□□ -0.51
RGPD5-201ENST00000016946 FAM117BQ6P1L5 589 aa11.85□□□□□ -0.51
RGPD5-201ENST00000016946 RDM1Q8NG50 284 aa11.85□□□□□ -0.51
RGPD5-201ENST00000016946 BCAP29Q9UHQ4 241 aa11.85□□□□□ -0.51
RGPD5-201ENST00000016946 TADA2AO75478 443 aa11.85□□□□□ -0.51
RGPD5-201ENST00000016946 DCLK2Q8N568 766 aa11.85□□□□□ -0.51
RGPD5-201ENST00000016946 PRMT7Q9NVM4 692 aaPredicted RBP11.85□□□□□ -0.51
RGPD5-201ENST00000016946 CCDC160A6NGH7 325 aa11.85□□□□□ -0.51
RGPD5-201ENST00000016946 FGFR2P21802 821 aa11.85□□□□□ -0.51
RGPD5-201ENST00000016946 ATP11AP98196 1134 aa11.85□□□□□ -0.51
RGPD5-201ENST00000016946 PCGF5Q86SE9 256 aa11.85□□□□□ -0.51
RGPD5-201ENST00000016946 HSPBP1Q9NZL4 362 aa11.85□□□□□ -0.51
RGPD5-201ENST00000016946 TFRCP02786 760 aaKnown RBP11.84□□□□□ -0.51
RGPD5-201ENST00000016946 KCTD17Q8N5Z5 321 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 CNTNAP5Q8WYK1 1306 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 FGGP02679 453 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 ITGA4P13612 1032 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 RAD51Q06609 339 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 TMEM62Q0P6H9 643 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 SLMAPQ14BN4 828 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 FRMD5Q7Z6J6 570 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 TTC30AQ86WT1 665 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 APPL2Q8NEU8 664 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 RTFDC1Q9BY42 306 aaPredicted RBP11.84□□□□□ -0.51
RGPD5-201ENST00000016946 KLC2Q9H0B6 622 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 FARP1Q9Y4F1 1045 aaPredicted RBP11.84□□□□□ -0.51
RGPD5-201ENST00000016946 ZNF500O60304 480 aaPredicted RBP11.84□□□□□ -0.51
RGPD5-201ENST00000016946 TRIM72Q6ZMU5 477 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 SLC38A7Q9NVC3 462 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 BCL9O00512 1426 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 EPHB4P54760 987 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 KIAA1755Q5JYT7 1200 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 NOP9Q86U38 636 aaKnown RBP11.84□□□□□ -0.51
RGPD5-201ENST00000016946 SPATA2LQ8IUW3 424 aaPredicted RBP11.84□□□□□ -0.51
RGPD5-201ENST00000016946 C10orf67Q8IYJ2 551 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 REEP2Q9BRK0 252 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 VPS33BQ9H267 617 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 SLC16A3O15427 465 aaKnown RBP11.84□□□□□ -0.51
RGPD5-201ENST00000016946 DR1Q01658 176 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 STILQ15468 1287 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 YAF2Q8IY57 180 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 GPC2Q8N158 579 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 LRRC8CQ8TDW0 803 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 TNS2Q63HR2 1409 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 NOL3O60936 208 aaKnown RBP11.84□□□□□ -0.51
RGPD5-201ENST00000016946 DHX9Q08211 1270 aaKnown RBP11.84□□□□□ -0.51
RGPD5-201ENST00000016946 TROAPQ12815 778 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 FAM102AQ5T9C2 384 aaPredicted RBP11.84□□□□□ -0.51
RGPD5-201ENST00000016946 PLA2G4FQ68DD2 849 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 FAM83AQ86UY5 434 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 SPDYE1Q8NFV5 336 aaPredicted RBP11.84□□□□□ -0.51
RGPD5-201ENST00000016946 DHX38Q92620 1227 aaKnown RBP11.84□□□□□ -0.51
RGPD5-201ENST00000016946 SPON2Q9BUD6 331 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 PCSK1NQ9UHG2 260 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 ATP8A1Q9Y2Q0 1164 aa11.84□□□□□ -0.51
RGPD5-201ENST00000016946 SARM1Q6SZW1 724 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 NUDT18Q6ZVK8 323 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 CALR3Q96L12 384 aaKnown RBP11.83□□□□□ -0.52
RGPD5-201ENST00000016946 SENP2Q9HC62 589 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 DDTLA6NHG4 134 aaPredicted RBP11.83□□□□□ -0.52
RGPD5-201ENST00000016946 TCF7P36402 384 aaPredicted RBP11.83□□□□□ -0.52
RGPD5-201ENST00000016946 ACOT2P49753 483 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 RASSF2P50749 326 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 TMEM132DQ14C87 1099 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 EFCAB12Q6NXP0 572 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 LRRC71Q8N4P6 559 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 DIS3Q9Y2L1 958 aaKnown RBP11.83□□□□□ -0.52
RGPD5-201ENST00000016946 TMX2Q9Y320 296 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 CREB3O43889 395 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 KAZALD1Q96I82 304 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 MOSPD1Q9UJG1 213 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 KIDINS220Q9ULH0 1771 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 SOX5P35711 763 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 RRAGDQ9NQL2 400 aaPredicted RBP11.83□□□□□ -0.52
RGPD5-201ENST00000016946 ANKEF1Q9NU02 776 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 PPP1R9AQ9ULJ8 1098 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 CCDC188H7C350 402 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 FOXN1O15353 648 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 MYBL1P10243 752 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 CACNA2D3Q8IZS8 1091 aa11.83□□□□□ -0.52
RGPD5-201ENST00000016946 ZNF564Q8TBZ8 553 aaPredicted RBP11.83□□□□□ -0.52
RGPD5-201ENST00000016946 PDCD6IPQ8WUM4 868 aaKnown RBP11.83□□□□□ -0.52
RGPD5-201ENST00000016946 NPHP3-ACAD11A0A0J9YXS1 232 aa11.82□□□□□ -0.52
RGPD5-201ENST00000016946 MT-ND3P03897 115 aa11.82□□□□□ -0.52
RGPD5-201ENST00000016946 KRT7P08729 469 aa11.82□□□□□ -0.52
RGPD5-201ENST00000016946 RPA1P27694 616 aa11.82□□□□□ -0.52
RGPD5-201ENST00000016946 CDK17Q00537 523 aa11.82□□□□□ -0.52
RGPD5-201ENST00000016946 JADE1Q6IE81 842 aa11.82□□□□□ -0.52
RGPD5-201ENST00000016946 ZNF746Q6NUN9 644 aaPredicted RBP11.82□□□□□ -0.52
RGPD5-201ENST00000016946 TADA2BQ86TJ2 420 aa11.82□□□□□ -0.52
RGPD5-201ENST00000016946 BCORL1Q5H9F3 1711 aa11.82□□□□□ -0.52
RGPD5-201ENST00000016946 COL5A2P05997 1499 aaPredicted RBP11.82□□□□□ -0.52
RGPD5-201ENST00000016946 ARHGAP25P42331 645 aa11.82□□□□□ -0.52
RGPD5-201ENST00000016946 RAB3IPQ96QF0 476 aaPredicted RBP11.82□□□□□ -0.52
RGPD5-201ENST00000016946 BPIFA3Q9BQP9 254 aa11.82□□□□□ -0.52
RGPD5-201ENST00000016946 HEY1Q9Y5J3 304 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms