RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 CPA4Q9UI42 421 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 IL18RAPO95256 599 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 SLC4A1P02730 911 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 SKIP12755 728 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 RPA1P27694 616 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 CASP7P55210 303 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 TPD52P55327 224 aaPredicted RBP11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 CEP85LQ5SZL2 805 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 NUDT18Q6ZVK8 323 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 C7orf25Q9BPX7 421 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 REEP2Q9BRK0 252 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 PDHXO00330 501 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 UPP2O95045 317 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 MYBL1P10243 752 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 CALRP27797 417 aaKnown RBP11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 SNRPFP62306 86 aaKnown RBP11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 STILQ15468 1287 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 B4GALNT4Q76KP1 1039 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 YAF2Q8IY57 180 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 ANKRD42Q8N9B4 389 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 AGAP1Q9UPQ3 857 aa11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 DIS3Q9Y2L1 958 aaKnown RBP11.08□□□□□ -0.64
NIPAL3-201ENST00000003912 MIF4GDA9UHW6 222 aaKnown RBP11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 TROVE2P10155 538 aaKnown RBP eCLIP11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 FXR2P51116 673 aaKnown RBP eCLIP11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 PSMC1P62191 440 aaKnown RBP11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 TSTA3Q13630 321 aaPredicted RBP11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 DRAP1Q14919 205 aaPredicted RBP11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 BTBD8Q5XKL5 378 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 MYRIPQ8NFW9 859 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 GDAP1Q8TB36 358 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 PRPF31Q8WWY3 499 aaKnown RBP11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 C11orf70Q9BRQ4 267 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 SYNGAP1Q96PV0 1343 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 FAM205CA6NFA0 338 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 NDUFAB1O14561 156 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 ACTR2P61160 394 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 TMEM62Q0P6H9 643 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 ATF7IP2Q5U623 682 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 PLA2G4FQ68DD2 849 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 CC2D1AQ6P1N0 951 aaPredicted RBP11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 NOTUMQ6P988 496 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 RAB44Q7Z6P3 723 aaPredicted RBP11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 TTC13Q8NBP0 860 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 PARD3BQ8TEW8 1205 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 IDI2Q9BXS1 227 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 SENP2Q9HC62 589 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 EHD2Q9NZN4 543 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 DISP2A7MBM2 1401 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 NPHP3-ACAD11A0A0J9YXS1 232 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 NKRFO15226 690 aaKnown RBP eCLIP11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 KPNA6O60684 536 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 RNF40O75150 1001 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 TRIM49P0CI25 452 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 TRIM49CP0CI26 452 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 STAG3L1P0CL83 205 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 ZNF484Q5JVG2 852 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 ANKRD20A3Q5VUR7 823 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 RAPH1Q70E73 1250 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 DDX50Q9BQ39 737 aaKnown RBP11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 POLR3CQ9BUI4 534 aaPredicted RBP11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 IGSF9BQ9UPX0 1349 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 WDR72Q3MJ13 1102 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 MOXD1Q6UVY6 613 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 AKT1S1Q96B36 256 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 HVCN1Q96D96 273 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 SH2D3AQ9BRG2 576 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 FARP1Q9Y4F1 1045 aaPredicted RBP11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 ANGPTL3Q9Y5C1 460 aa11.07□□□□□ -0.64
NIPAL3-201ENST00000003912 C3P01024 1663 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 LRRC53A6NM62 1247 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 HERVK_113P62684 666 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 PPATQ06203 517 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 RILPQ96NA2 401 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 SPATC1LQ9H0A9 340 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 AAASQ9NRG9 546 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 PCDHB7Q9Y5E2 793 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 ADM5C9JUS6 153 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 STRNO43815 780 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 KPNA2P52292 529 aaKnown RBP11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 SEPT6Q14141 434 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 GDAP1L1Q96MZ0 367 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 C17orf75Q9HAS0 396 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 PPFIA4O75335 1185 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 DSG3P32926 999 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 BFSP2Q13515 415 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 EFHC2Q5JST6 749 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 GKAP1Q5VSY0 366 aaPredicted RBP11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 SARM1Q6SZW1 724 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 VSIG1Q86XK7 387 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 STMN2Q93045 179 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 CDCA5Q96FF9 252 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 FAM163AQ96GL9 167 aaPredicted RBP11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 TACC3Q9Y6A5 838 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 UBR1Q8IWV7 1749 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 ZRANB2O95218 330 aaKnown RBP eCLIP11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 GRIK1P39086 918 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 APBA1Q02410 837 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 GAS2L3Q86XJ1 694 aa11.06□□□□□ -0.64
NIPAL3-201ENST00000003912 LRRC71Q8N4P6 559 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms