RNA–Protein interactions for RNA: ENSMUST00000222968.1

Cpsf3-211, Transcript of Cleavage and polyadenylation specificity factor subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Cpsf3, Length 1,858 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3-211ENSMUST00000222968 Bcat1P24288 386 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Hspa9P38647 679 aaKnown RBP10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Pik3caP42337 1068 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Kcna2P63141 499 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Col9a2Q07643 688 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Ttc39dQ0VF76 604 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Skap2Q3UND0 358 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Nr2e1Q64104 385 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Q8BGN9 141 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Ublcp1Q8BGR9 318 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Micall1Q8BGT6 870 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Spata21Q8BHW6 681 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Vps36Q91XD6 386 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 BrdtQ91Y44 956 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Fam114a1Q9D281 569 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Gtf3c6Q9D8P7 227 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 IydQ9DCX8 285 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Olr1Q9EQ09 363 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Mta2Q9R190 668 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 B3galt4Q9Z0F0 371 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Gm28036V9GXJ1 658 aa10.98□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 PhipQ8VDD9 1821 aaKnown RBP10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Slc35g2D3YVE8 412 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Gm3127E9Q9P5 263 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 4930544D05RikJ3QK56 214 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Gm3453K7N724 263 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Map2k1P31938 393 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Sco1Q5SUC9 284 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Cnot7Q60809 285 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 AdalQ80SY6 360 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Rusc1Q8BG26 893 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Pgm5Q8BZF8 567 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Slc26a6Q8CIW6 758 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Alg1Q921Q3 482 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Usp26Q99MX1 835 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Ddx47Q9CWX9 455 aaKnown RBP10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Ankef1Q9D2J7 775 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Capn9Q9D805 690 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Usp29Q9ES63 869 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Zcchc17Q9ESX4 241 aaKnown RBP10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Sept3Q9Z1S5 350 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Col4a3Q9QZS0 1669 aa10.97□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Skor2A7M7C7 1008 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Capn2O08529 700 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Magea5O89009 320 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Magea8O89012 320 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 PrkceP16054 737 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Trap1aP19473 224 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Actr2P61161 394 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Rgs9bpQ148R9 237 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Zc3h15Q3TIV5 426 aaKnown RBP10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Trip13Q3UA06 432 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Capn13Q3UW68 665 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Rhox12Q4TU81 186 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Thrap3Q569Z6 951 aaKnown RBP10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Ctc1Q5SUQ9 1212 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Anks6Q6GQX6 883 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Magea3Q6T340 320 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Kcnk18Q6VV64 394 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Azin2Q8BVM4 459 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Usp37Q8C0R0 979 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Ccdc134Q8C7V8 229 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Serpinb13Q8CDC0 389 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Pop1Q8K205 1045 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Tbx22Q8K402 517 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Lgi2Q8K4Z0 550 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Smc6Q924W5 1097 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Ino80bQ99PT3 375 aaKnown RBP10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Acsl3Q9CZW4 720 aaKnown RBP10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 FibpQ9JI19 357 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Cul1Q9WTX6 776 aa10.96□□□□□ -0.65
Cpsf3-211ENSMUST00000222968 Trip11E9Q512 1976 aa10.96□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Map7d2A2AG50 781 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Gm6121L7MUF1 212 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 PtenO08586 403 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 SpibO35906 267 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Stk10O55098 966 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Nptx2O70340 429 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Axin2O88566 840 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Alkbh1P0CB42 389 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Syt2P46097 422 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Wee1P47810 646 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Surf6P70279 355 aaKnown RBP10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 MlxipQ2VPU4 917 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Nr1d1Q3UV55 615 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 FancbQ5XJY6 703 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Ttyh3Q6P5F7 524 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Trim37Q6PCX9 961 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Dync1li2Q6PDL0 492 aaKnown RBP10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Rps6ka6Q7TPS0 764 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Q8BGC1 442 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Q8BGD0 127 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Trim6Q8BGE7 488 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Kctd6Q8BNL5 237 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Ccdc15Q8C9M2 810 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Klhl11Q8CE33 709 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Mettl13Q91YR5 698 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Bco2Q99NF1 532 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Rbm31yQ9D3U4 565 aa10.95□□□□□ -0.66
Cpsf3-211ENSMUST00000222968 Rnf225Q9D7D1 332 aa10.95□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 18.6 ms