RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Gga3Q8BMI3 718 aa19.4■□□□□ 0.7
Trim71-201ENSMUST00000111816 Gm3411Q8C7R2 150 aa19.4■□□□□ 0.7
Trim71-201ENSMUST00000111816 Q8CEZ4 452 aa19.4■□□□□ 0.7
Trim71-201ENSMUST00000111816 Tnni1Q9WUZ5 187 aa19.4■□□□□ 0.7
Trim71-201ENSMUST00000111816 9330159F19RikD3Z623 648 aa19.39■□□□□ 0.7
Trim71-201ENSMUST00000111816 FynP39688 537 aa19.39■□□□□ 0.7
Trim71-201ENSMUST00000111816 Serpina3bQ8BYY9 420 aa19.39■□□□□ 0.7
Trim71-201ENSMUST00000111816 Olfr1123A2AT85 323 aa19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 Eya2O08575 532 aa19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 Nlrp9aQ66X03 949 aa19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 YwhabQ9CQV8 246 aaKnown RBP19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 Zkscan8Q8BSL0 588 aa19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 Slc26a6Q8CIW6 758 aa19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 Klhl28Q9CR40 571 aa19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 AI481877A2ALV5 1481 aa19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 SarsP26638 512 aaKnown RBP19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 Colgalt2Q6NVG7 625 aa19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 Trip11E9Q512 1976 aa19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 Zc3h7bF8VPP8 982 aaKnown RBP19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 Scn3bQ8BHK2 215 aa19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 TwistnbQ78WZ7 330 aaKnown RBP19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 Trim62Q80V85 475 aa19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 Kcnv2Q8CFS6 562 aa19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 Ing3Q8VEK6 421 aa19.39■□□□□ 0.69
Trim71-201ENSMUST00000111816 Sik3Q6P4S6 1311 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Il7P10168 154 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Gsta1P13745 223 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Slc27a1Q60714 646 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Gsta1Q6P8Q0 223 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Phf20Q8BLG0 1010 aaKnown RBP19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Depdc7Q91WS7 511 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Tk2Q9R088 270 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Ankrd50F7BE84 1390 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 AF366264G3X9P9 502 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Mlh1Q9JK91 760 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 A0A286YCQ6 122 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Cyp24a1Q64441 514 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Klhl24Q8BRG6 600 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Cops6O88545 324 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Akr1b1P45376 316 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Teddm2Q208S0 260 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Itga1Q3V3R4 1179 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Q8BP99 230 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Abcf3Q8K268 709 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Nrbp1Q99J45 535 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Tjap1Q9DCD5 539 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 ParvaQ9EPC1 372 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Gm45194A0A140LJG2 572 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Cyp26a1O55127 497 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Ctnnal1O88327 731 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Tuba1bP05213 451 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Tuba1aP68369 451 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Agr3Q8R3W7 165 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 CrnnD3YUU6 520 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Ap1m1P35585 423 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Hnrnph1O35737 449 aaKnown RBP19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Stat4P42228 749 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Q3TQQ9 903 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Gfpt2Q9Z2Z9 682 aa19.38■□□□□ 0.69
Trim71-201ENSMUST00000111816 Ankrd13cQ3UX43 541 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 NppbP40753 121 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Tom1l2Q5SRX1 507 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Klhl2Q8JZP3 593 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Serpinb9bQ9DAV6 377 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Gm340F6RGI3 1242 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 SftpbP50405 377 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Rsbn1Q80T69 795 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 TbcdQ8BYA0 1196 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Prpf6Q91YR7 941 aaKnown RBP19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Map3k20Q9ESL4 802 aaKnown RBP19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Ubxn8Q9QZ49 277 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Ahcyl1Q80SW1 530 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Znf445Q8R2V3 986 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Clptm1Q8VBZ3 664 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Fam169aQ5XG69 665 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Ascc2Q91WR3 749 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Gm8267E9Q207 261 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Tmed5Q9CXE7 229 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Olfr292F8VQ84 308 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Ddx31Q6NZQ2 687 aaKnown RBP19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Inpp5fQ8CDA1 1132 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Gm382B1AXN3 1250 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Atxn10P28658 475 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Gm13103Q4VAD2 491 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Q5EBG8 199 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Rnf6Q9DBU5 667 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Hmg20aQ9DC33 346 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Uts2Q9QZQ3 123 aa19.37■□□□□ 0.69
Trim71-201ENSMUST00000111816 Anks1aP59672 1150 aa19.36■□□□□ 0.69
Trim71-201ENSMUST00000111816 Trim72Q1XH17 477 aa19.36■□□□□ 0.69
Trim71-201ENSMUST00000111816 Rmnd1Q8CI78 450 aa19.36■□□□□ 0.69
Trim71-201ENSMUST00000111816 Msh2P43247 935 aaKnown RBP19.36■□□□□ 0.69
Trim71-201ENSMUST00000111816 Naip5Q9R016 1403 aa19.36■□□□□ 0.69
Trim71-201ENSMUST00000111816 Gm3252E9PUT9 216 aa19.36■□□□□ 0.69
Trim71-201ENSMUST00000111816 Gm2956E9PVJ0 216 aa19.36■□□□□ 0.69
Trim71-201ENSMUST00000111816 Gm3002E9PW72 216 aa19.36■□□□□ 0.69
Trim71-201ENSMUST00000111816 Gm3468E9QAJ8 216 aa19.36■□□□□ 0.69
Trim71-201ENSMUST00000111816 Gm8108K7N734 216 aa19.36■□□□□ 0.69
Trim71-201ENSMUST00000111816 Gm3739L7N296 216 aa19.36■□□□□ 0.69
Trim71-201ENSMUST00000111816 Gm3164L7N2B9 238 aa19.36■□□□□ 0.69
Retrieved 100 of 22,080 RNA–protein pairs in 34.3 ms