RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Dyrk4Q8BI55 632 aa10.4□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Gimap6Q8K349 305 aa10.4□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Dusp19Q8K4T5 220 aa10.4□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Trim29Q8R2Q0 587 aa10.4□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Ifih1Q8R5F7 1025 aa10.4□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Gpr108Q91WD0 569 aa10.4□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Trim7Q923T7 510 aa10.4□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Drg2Q9QXB9 364 aaKnown RBP10.4□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Gpc6Q9R087 555 aa10.4□□□□□ -0.74
Hmgb1-201ENSMUST00000085546 Galntl6E5D8G1 601 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Cdr1E9Q0B4 517 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 MthfslL7N466 203 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Eno1P17182 434 aaKnown RBP10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 PklrP53657 574 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Rpl26P61255 145 aaKnown RBP10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Rrp36Q3UFY0 244 aaKnown RBP10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Fam169aQ5XG69 665 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ppp2r5eQ61151 467 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Eif2s1Q6ZWX6 315 aaKnown RBP10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Tmtc3Q8BRH0 920 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Arhgap24Q8C4V1 747 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 BsndQ8VIM4 307 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Tekt1Q9DAJ2 418 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gtf2ird1Q9JI57 1104 aaKnown RBP10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Tcp11x2A2AEI7 503 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Herc3A6H6S0 1050 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Zbtb21E9Q444 1094 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Srsf11E9Q6E5 511 aaKnown RBP10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Prl3d2F6R3P9 224 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 PtenO08586 403 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Bub1O08901 1058 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Kcnj13P86046 360 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ndufaf2Q59J78 168 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Islr2Q5RKR3 745 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Mysm1Q69Z66 819 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Cyp4x1Q6A152 507 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Shq1Q7TMX5 569 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gemin8Q8BHE1 238 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ildr1Q8CBR1 537 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ccdc28aQ8CEI3 192 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Med21Q9CQ39 144 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Q9CR55 154 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Pacsin2Q9WVE8 486 aaKnown RBP10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 MtrA6H5Y3 1253 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gm8444F6XS56 118 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ebf3O08791 596 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Naa20P61600 178 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Pih1d3Q3KNI6 218 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 DtlQ3TLR7 729 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Fam172aQ3TNH5 417 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Foxn3Q499D0 457 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 NfrkbQ6PIJ4 1296 aaKnown RBP10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Tlr13Q6R5N8 991 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Dnajc6Q80TZ3 938 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Usp1Q8BJQ2 784 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Gin1Q8K259 518 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Lsm14aQ8K2F8 462 aaKnown RBP10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Lrrc49Q91YK0 686 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Rad51cQ924H5 366 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Cyp4f15Q99N18 534 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Dgcr8Q9EQM6 773 aa10.39□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Col3a1P08121 1464 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Dhtkd1A2ATU0 921 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Krt78E9Q0F0 1068 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Pde6aP27664 859 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Eif4a1P60843 406 aaKnown RBP10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 SobpQ0P5V2 864 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Nlrp2Q4PLS0 1046 aaKnown RBP10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Arhgap10Q6Y5D8 786 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Znf423Q80TS5 1292 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Phf20Q8BLG0 1010 aaKnown RBP10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Slc9b1Q8C0X2 565 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Pabpn1Q8CCS6 302 aaKnown RBP10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 CerkQ8K4Q7 531 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 StambpQ9CQ26 424 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Rdm1Q9CQK3 281 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Psmd8Q9CX56 353 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Etnk1Q9D4V0 363 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Xab2Q9DCD2 855 aaKnown RBP10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Yipf5Q9EQQ2 257 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Hdac6Q9Z2V5 1149 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Abca3Q8R420 1704 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Cps1Q8C196 1500 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Spocd1B1ASB6 936 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ift81O35594 676 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 BrafP28028 804 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Hspa8P63017 646 aaKnown RBP10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Sycp3P70281 254 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Creb1Q01147 341 aaKnown RBP10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Cntn3Q07409 1028 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Nlrc4Q3UP24 1024 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Q3UTZ3 580 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Rnf207Q3V3A7 635 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Shc3Q61120 474 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Heatr3Q8BQM4 679 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Ccdc151Q8BSN3 593 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Il17cQ8K4C5 194 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Dync1li1Q8R1Q8 523 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Cnot6lQ8VEG6 555 aa10.38□□□□□ -0.75
Hmgb1-201ENSMUST00000085546 Pip4k2cQ91XU3 421 aa10.38□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 19.1 ms