RNA–Protein interactions for RNA: ENSMUST00000068411.4

Ccdc88c-201, Transcript of Protein Daple, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc88c, Length 7,542 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88c-201ENSMUST00000068411 Ccdc40Q8BI79 1192 aa13.36□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Llcfc1Q9D9P8 108 aa13.36□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Ehd4Q9EQP2 541 aa13.36□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Aff4Q9ESC8 1160 aa13.36□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Peg12Q9WVA7 283 aa13.36□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Col6a1Q04857 1025 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 PrimpolQ6P1E7 537 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Ipo11Q8K2V6 975 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Zmat2Q9CPW7 199 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Ap2b1Q9DBG3 937 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Atp11cQ9QZW0 1129 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Slc35g2D3YVE8 412 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Gm3182K7N6T8 263 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Tpp1O89023 562 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 LmnaP48678 665 aaKnown RBP13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Nr1h4Q60641 488 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Mrgprx1Q8CIP3 322 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 CerkQ8K4Q7 531 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Chit1Q9D7Q1 464 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Supt3B0QZW4 406 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Psen2Q61144 448 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Plcg1Q62077 1302 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Msr1P30204 458 aaKnown RBP13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Psma2P49722 234 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 OscarQ8VBT3 265 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Zkscan3Q91VW9 553 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Rrp15Q9CYX7 281 aaKnown RBP13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Arl6ip4Q9JM93 229 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 EcsitQ9QZH6 435 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Tbk1Q9WUN2 729 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Cog1Q9Z160 980 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Gm28360A0A087WR25 190 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 DtnbO70585 659 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Nlrp4eQ66X19 978 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Fam160b1Q8CDM8 764 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Lzts3A2AHG0 700 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Olfr1354E9Q5G9 310 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Vamp7P70280 220 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 EgfrQ01279 1210 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Trim72Q1XH17 477 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Zfp956Q3UZY6 572 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Prr7Q3V0I2 269 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Abraxas1Q8BPZ8 407 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Gpc3Q8CFZ4 579 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Unc45bQ8CGY6 931 aaKnown RBP13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 CenpkQ9ESN5 271 aa13.35□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Gm20721E9Q2U8 318 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Plekha5E9Q6H8 1269 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Serpinb3aG3X9V8 387 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Chp1P61022 195 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Akap4Q60662 849 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Zc4h2Q68FG0 224 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Arhgap26Q6ZQ82 814 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Nup93Q8BJ71 819 aaKnown RBP13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Gm28961A0A087WPA5 222 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Gm21858A0A087WQ24 222 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Sdccag3A2AIW0 432 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Mocs3A2BDX3 460 aaKnown RBP13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Pramef20B1ARV6 477 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Nmt1O70310 496 aaKnown RBP13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Sema3eP70275 775 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Ddx42Q810A7 929 aaKnown RBP13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Olfr1494Q8VGP8 315 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Atp6v1b1Q91YH6 513 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Rpn1Q91YQ5 608 aaKnown RBP13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Lrrc6O88978 473 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Sat1P48026 171 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Acot5Q6Q2Z6 421 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Arhgap15Q811M1 481 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Prpf4Q9DAW6 521 aaKnown RBP13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Nr1h3Q9Z0Y9 445 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Vmn2r121A2BE32 847 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Apba1B2RUJ5 842 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Kcna2P63141 499 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Arhgap30Q640N3 1101 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 A430078G23RikE9Q7Y4 484 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Tlk2O55047 718 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 StamP70297 548 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Atp8b1Q148W0 1251 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Krt31Q61765 416 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 B3galnt2Q8BG28 504 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Eif4g3Q80XI3 1579 aaKnown RBP13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Fmn2Q9JL04 1578 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Inpp1P49442 396 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Gm136Q3V037 328 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Gm13103Q4VAD2 491 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 H6pdQ8CFX1 789 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Ifi205aQ8CGE8 404 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Wars2Q9CYK1 360 aa13.34□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Nup160Q9Z0W3 1402 aaKnown RBP13.33□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Cyp2c69E9PXC3 491 aa13.33□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Cyp2c40P56657 491 aa13.33□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Vsnl1P62761 191 aa13.33□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Itih1Q61702 907 aa13.33□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Tmem134Q8R0J4 195 aa13.33□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Chn1Q91V57 459 aa13.33□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Ferd3lQ923Z4 168 aa13.33□□□□□ -0.27
Ccdc88c-201ENSMUST00000068411 Nlrp4aQ8BU40 982 aa13.33□□□□□ -0.28
Ccdc88c-201ENSMUST00000068411 Q8BWG4 1187 aa13.33□□□□□ -0.28
Ccdc88c-201ENSMUST00000068411 Tlk1Q8C0V0 766 aa13.33□□□□□ -0.28
Retrieved 100 of 22,080 RNA–protein pairs in 22 ms