RNA–Protein interactions for RNA: ENSMUST00000043767.8

Upf3a-201, Transcript of MCG3697, isoform CRA_c, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3a, Length 2,057 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3a-201ENSMUST00000043767 PtpreP49446 699 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Serpina1eQ00898 413 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Frmd8Q3UFK8 466 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Matr3Q8K310 846 aaKnown RBP24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Atp1a1Q8VDN2 1023 aaKnown RBP24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 CtsqQ91ZF4 343 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Cep72Q9D3R3 646 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 PrameQ9D4Z5 464 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 1700016D06RikQ9DAA5 166 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Slc15a2Q9ES07 729 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Hs6st3Q9QYK4 470 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Sema4dO09126 861 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Atp9bP98195 1146 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Gm5169Q5M8P2 212 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Lamb3Q61087 1168 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Hdac10Q6P3E7 666 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Bicdl2Q8CHW5 507 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Ccdc43Q9CR29 222 aaKnown RBP24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Sdr42e1Q9D665 394 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 EcsitQ9QZH6 435 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Klra10Q9R1G6 266 aa24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Uso1Q9Z1Z0 959 aaKnown RBP24.84■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Ank3G5E8K5 1961 aa24.83■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Gm8909G3UXE9 396 aa24.83■■□□□ 1.57
Upf3a-201ENSMUST00000043767 EpoP07321 192 aa24.83■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Shc3Q61120 474 aa24.83■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Haus4Q8BFT2 363 aa24.83■■□□□ 1.57
Upf3a-201ENSMUST00000043767 LppQ8BFW7 613 aa24.83■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Eif4bQ8BGD9 611 aaKnown RBP24.83■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Ccdc169Q8BXX9 214 aa24.83■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Usp37Q8C0R0 979 aa24.83■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Upb1Q8VC97 393 aa24.83■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Prmt7Q922X9 692 aa24.83■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Tube1Q9D6T1 475 aa24.83■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Taf1Q80UV9 1891 aa24.83■■□□□ 1.57
Upf3a-201ENSMUST00000043767 Pgrmc1O55022 195 aa24.82■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Rad23aP54726 363 aa24.82■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Mark2Q05512 776 aa24.82■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Spink5Q148R4 1017 aa24.82■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Ccdc85aQ5SP85 500 aa24.82■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Fscn1Q61553 493 aa24.82■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Sh3d21Q7TSG5 549 aa24.82■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Mapk15Q80Y86 549 aa24.82■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Tbc1d15Q9CXF4 671 aa24.82■■□□□ 1.56
Upf3a-201ENSMUST00000043767 PtprcP06800 1291 aa24.82■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Tlr13Q6R5N8 991 aa24.82■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Actn1Q7TPR4 892 aaKnown RBP24.82■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Cdc23Q8BGZ4 597 aa24.82■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Smc1aQ9CU62 1233 aaKnown RBP24.82■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Mettl1Q9Z120 268 aa24.82■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Gml2G5E8L7 176 aa24.81■■□□□ 1.56
Upf3a-201ENSMUST00000043767 SnrpfP62307 86 aaKnown RBP24.81■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Tcerg1lQ3B807 590 aa24.81■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Dzip3Q7TPV2 1204 aa24.81■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Ankfy1Q810B6 1169 aa24.81■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Vopp1Q8R1C3 172 aa24.81■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Smyd3Q9CWR2 428 aa24.81■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Akt3Q9WUA6 479 aa24.81■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Gm20503G3UZK1 150 aa24.81■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Abcd1P48410 736 aa24.81■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Acot6Q32Q92 419 aa24.81■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Mphosph8Q3TYA6 858 aaKnown RBP24.81■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Q3UK37 420 aa24.81■■□□□ 1.56
Upf3a-201ENSMUST00000043767 1700016G14RikA0A286YCZ6 238 aa24.8■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Taf4bG5E8Z2 855 aa24.8■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Chrna1P04756 457 aa24.8■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Cdr2P97817 455 aa24.8■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Agxt2Q3UEG6 513 aa24.8■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Klra7Q60654 280 aa24.8■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Gemin4Q6P6L6 1058 aaKnown RBP24.8■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Cypt1Q8CH20 168 aa24.8■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Cfap53Q9D439 514 aa24.8■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Gjb1P28230 283 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Mcl1P97287 331 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Styk1Q6J9G1 429 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Celf6Q7TN33 460 aaKnown RBP24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Hgh1Q8C3I8 393 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Mtmr14Q8VEL2 648 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 LctF8VPT3 1931 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Cdr2lA2A6T1 465 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Zfp457L7N1X4 647 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Chp1P61022 195 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Ppp3caP63328 521 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Znhit6Q3UFB2 460 aaKnown RBP24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Carmil2Q3V3V9 1296 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 C6.1alQ7M757 291 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 PodnQ7TQ62 611 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Dact1Q8R4A3 778 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Pqbp1Q91VJ5 263 aaKnown RBP24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Lonp2Q9DBN5 852 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 B4galt5Q9JMK0 388 aa24.79■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Myo5aQ99104 1853 aaKnown RBP24.78■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Sec14l1A8Y5H7 715 aa24.78■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Serpinb3aG3X9V8 387 aa24.78■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Mmp15O54732 657 aa24.78■■□□□ 1.56
Upf3a-201ENSMUST00000043767 PuraP42669 321 aaKnown RBP24.78■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Rtel1Q0VGM9 1203 aa24.78■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Cdca2Q14B71 982 aaKnown RBP24.78■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Ints8Q80V86 995 aa24.78■■□□□ 1.56
Upf3a-201ENSMUST00000043767 Mettl24Q8CCB5 363 aa24.78■■□□□ 1.56
Retrieved 100 of 22,080 RNA–protein pairs in 17.1 ms