RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Gadd45bP22339 160 aa12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Pcbp1P60335 356 aaKnown RBP12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Mark3Q03141 753 aa12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Asprv1Q09PK2 339 aa12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Tnfaip8l3Q3TBL6 204 aa12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Znf354cQ571J5 560 aa12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Tcf12Q61286 706 aa12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Has1Q61647 583 aa12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Vps72Q62481 368 aa12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Kiaa1841Q68FF0 718 aa12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Mrgprb8Q7TN51 330 aa12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Tmem260Q8BMD6 703 aa12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Tcaf1Q8BNE1 924 aa12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Lonp1Q8CGK3 949 aaKnown RBP12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Plekhh3Q8VCE9 796 aa12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 TheglQ9DA15 459 aa12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 GsdmeQ9Z2D3 512 aa12.52□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Gm45713A0A1B0GS68 446 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Gimd1E9PW74 217 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Gm6583E9Q8Z1 469 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Efna5O08543 228 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 EpoP07321 192 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Ccnd2P30280 289 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Upf3aQ3ULJ3 422 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Wdr44Q6NVE8 915 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Klhl17Q6TDP3 640 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Camsap3Q80VC9 1252 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 FtoQ8BGW1 502 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Qsox1Q8BND5 748 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 KyQ8C8H8 661 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Ugt2b1Q8R084 529 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Snw1Q9CSN1 536 aaKnown RBP12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Lrrc46Q9DAP0 323 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Cnga3Q9JJZ8 631 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Mx2Q9WVP9 655 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Spata31d1aE9QA35 1336 aa12.51□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Cdc27A2A6Q5 825 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Acad12D3Z7X0 555 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Ccdc188F6WEU2 249 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 MybP06876 636 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 CcnoP0C242 352 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Scarf2P59222 833 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Gtf2bP62915 316 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Pkn1P70268 946 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Trim43cP86449 446 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Zbtb8osQ505B7 168 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Enpp3Q6DYE8 874 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Jade1Q6ZPI0 834 aaKnown RBP12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Zc3h6Q8BYK8 1177 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Csgalnact2Q8C1F4 542 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Gpc3Q8CFZ4 579 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Rpap2Q8VC34 614 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Dnajc28Q8VCE1 385 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Acot11Q8VHQ9 594 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 TraipQ8VIG6 470 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Ddah1Q9CWS0 285 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Olig1Q9JKN5 260 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 CtsfQ9R013 462 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 AmfrQ9R049 643 aa12.5□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Lrrc38A2VDH3 298 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Herc3A6H6S0 1050 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Zscan29E9Q5B4 869 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Dcpp3L7N259 170 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Serpinb8O08800 374 aaKnown RBP12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Pbx3O35317 434 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Exoc4O35382 975 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Ap1b1O35643 943 aaKnown RBP12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Smpd2O70572 419 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Tmem109Q3UBX0 243 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Gas2l3Q3UWW6 683 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Sycp1Q62209 993 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Dalrd3Q6PJN8 538 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Tmem117Q8BH18 514 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Znf473Q8BI67 892 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Ccser1Q8C0C4 895 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Tmem161bQ8C2L6 487 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Zfp202Q8C879 641 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Matr3Q8K310 846 aaKnown RBP12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Plagl2Q925T4 496 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Lman1Q9D0F3 517 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Q9D2Q3 444 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Myl7Q9QVP4 175 aa12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Rfc2Q9WUK4 349 aaKnown RBP12.49□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 1700001O22RikA2APZ1 375 aa12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Kansl3A2RSY1 903 aaKnown RBP12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Tatdn2B7ZNL9 783 aaKnown RBP12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 1700064H15RikD3Z4D4 81 aa12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Zfp358E9Q8M1 571 aa12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Nptx2O70340 429 aa12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Dpep1P31428 410 aa12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Man1a2P39098 641 aa12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 ArvcfP98203 962 aa12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Gpr15Q0VDU3 360 aa12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Edem3Q2HXL6 931 aa12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Rsad1Q5SUV1 442 aa12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Usp17laQ61068 526 aa12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Krt14Q61781 484 aa12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Herc4Q6PAV2 1057 aa12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Csnk1g3Q8C4X2 424 aa12.48□□□□□ -0.41
Ccdc28b-201ENSMUST00000030586 Nrip1Q8CBD1 1161 aa12.48□□□□□ -0.41
Retrieved 100 of 22,080 RNA–protein pairs in 64.8 ms