RNA–Protein interactions for RNA: ENSMUST00000001818.4

Crnkl1-201, Transcript of Crooked neck-like protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Crnkl1, Length 3,428 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1-201ENSMUST00000001818 Klra10Q9R1G6 266 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Orc1Q9Z1N2 840 aaKnown RBP8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Chrna9G3X8Z7 479 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Zfpm1O35615 995 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 DtnbO70585 659 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Ifnar1P33896 590 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Rpl13P47963 211 aaKnown RBP8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Mgat3Q10470 538 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Tmem35bQ3U0Y2 150 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Capn13Q3UW68 665 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 R3hdm4Q4VBF2 262 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Tp53i13Q5F267 385 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Krt15Q61414 452 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Irak1Q62406 710 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Rapgefl1Q68EF8 662 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Spag7Q7TNE3 227 aaKnown RBP8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Klhl7Q8BUL5 586 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Ccdc169Q8BXX9 214 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Prpf31Q8CCF0 499 aaKnown RBP8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Nmrk1Q91W63 195 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Fgd4Q91ZT5 766 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Dnajc18Q9CZJ9 357 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Erp44Q9D1Q6 406 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Klra17Q9JMA4 273 aa8.14□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Ms4a4aA0A087WRT7 236 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Xirp1O70373 1129 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Lrrc4bP0C192 709 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Aimp1P31230 310 aaKnown RBP8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 PltpP55065 493 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 LxnP70202 222 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Drp2Q05AA6 957 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Tgfbrap1Q3UR70 860 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Ice2Q3UZ18 988 aaKnown RBP8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Arhgap1Q5FWK3 439 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Fscn1Q61553 493 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Amer2Q8CCJ4 672 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Kat5Q8CHK4 513 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Parp10Q8CIE4 960 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Celf3Q8CIN6 465 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Sash3Q8K352 380 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Vmn1r203Q8R273 311 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 BbxQ8VBW5 907 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Ces1fQ91WU0 561 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Rtfdc1Q99K95 307 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Cfap53Q9D439 514 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Cnga3Q9JJZ8 631 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Lama2Q60675 3118 aaKnown RBP8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Lrrc38A2VDH3 298 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Pgrmc1O55022 195 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Cd70O55237 195 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 CraddO88843 199 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Itgb7P26011 806 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Top1Q04750 767 aaKnown RBP8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Stxbp5lQ5DQR4 1185 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Podnl1Q6P3Y9 559 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Ublcp1Q8BGR9 318 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Gpt2Q8BGT5 522 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Cdc23Q8BGZ4 597 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Vps52Q8C754 723 aaKnown RBP8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Tada3Q8R0L9 432 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Lpin2Q99PI5 893 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Sar1bQ9CQC9 198 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Dis3Q9CSH3 958 aaKnown RBP8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Smco2Q9DA21 347 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Prpf40aQ9R1C7 953 aaKnown RBP8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Pacsin2Q9WVE8 486 aaKnown RBP8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 1700017N19RikA0A087WPJ1 469 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Kcnu1O54982 1121 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Myo1aO88329 1043 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Fgd3O88842 733 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Q3TTJ4 293 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Palb2Q3U0P1 1104 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Lrig2Q52KR2 1054 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 C6.1alQ7M757 291 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Vat1lQ80TB8 417 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Dhx32Q8BZS9 744 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Lrrc56Q8K375 552 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Olfr1494Q8VGP8 315 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Plcb4Q91UZ1 1175 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Pcdhgc5Q91XW9 944 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Rpn1Q91YQ5 608 aaKnown RBP8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Pls3Q99K51 630 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Cep72Q9D3R3 646 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 PrameQ9D4Z5 464 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Tube1Q9D6T1 475 aa8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Maged1Q9QYH6 775 aaKnown RBP8.13□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Sec24cG3X972 1096 aaKnown RBP8.12□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Scgb2b19J3QM75 112 aa8.12□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Exoc4O35382 975 aa8.12□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Pou2f2Q00196 463 aa8.12□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Muc3aQ3U5A2 218 aa8.12□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Hdhd2Q3UGR5 259 aa8.12□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Snx25Q3ZT31 840 aa8.12□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Gm5169Q5M8P2 212 aa8.12□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Klra7Q60654 280 aa8.12□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Trmt13Q8BYH3 481 aa8.12□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Rrp1bQ91YK2 724 aaKnown RBP8.12□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Smyd3Q9CWR2 428 aa8.12□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 Ribc1Q9D0B8 379 aa8.12□□□□□ -1.11
Crnkl1-201ENSMUST00000001818 MesdQ9ERE7 224 aa8.12□□□□□ -1.11
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms