RNA–Protein interactions for RNA: tA(UGC)A

TGA1, Transcript of Alanine tRNA (tRNA-Ala), predicted by tRNAscan-SE analysis, yeast

Gene TGA1, Length 73 nt, Biotype tRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TGA1	tA(UGC)A	POL4	P25615	582 aa		7.15	□□□□□ -1.26
TGA1	tA(UGC)A	PPA2	P28239	310 aa		7.15	□□□□□ -1.26
TGA1	tA(UGC)A	UBC8	P28263	218 aa		7.15	□□□□□ -1.26
TGA1	tA(UGC)A	CAM1	P29547	415 aa	Known RBP	7.15	□□□□□ -1.26
TGA1	tA(UGC)A	CYS4	P32582	507 aa	Known RBP	7.15	□□□□□ -1.26
TGA1	tA(UGC)A	RTC2	P38279	296 aa		7.15	□□□□□ -1.26
TGA1	tA(UGC)A	YAR028W	P39548	234 aa		7.15	□□□□□ -1.26
TGA1	tA(UGC)A	IDP2	P41939	412 aa		7.15	□□□□□ -1.26
TGA1	tA(UGC)A	FAR7	P43592	221 aa		7.15	□□□□□ -1.26
TGA1	tA(UGC)A	IDS2	P46958	469 aa		7.15	□□□□□ -1.26
TGA1	tA(UGC)A	MDE1	P47095	244 aa		7.15	□□□□□ -1.26
TGA1	tA(UGC)A	YGR016W	P53209	190 aa		7.15	□□□□□ -1.26
TGA1	tA(UGC)A	COS1	P53822	381 aa		7.15	□□□□□ -1.26
TGA1	tA(UGC)A	DTD1	Q07648	150 aa	Known RBP	7.15	□□□□□ -1.26
TGA1	tA(UGC)A	YPL119C-A	Q3E751	87 aa		7.15	□□□□□ -1.26
TGA1	tA(UGC)A	MHF1	Q3E835	90 aa		7.15	□□□□□ -1.26
TGA1	tA(UGC)A	RIB3	Q99258	208 aa		7.15	□□□□□ -1.26
TGA1	tA(UGC)A	FBA1	P14540	359 aa	Known RBP	7.14	□□□□□ -1.27
TGA1	tA(UGC)A	PRP28	P23394	588 aa		7.14	□□□□□ -1.27
TGA1	tA(UGC)A	EXG1	P23776	448 aa	Known RBP	7.14	□□□□□ -1.27
TGA1	tA(UGC)A	YCL042W	P25572	119 aa		7.14	□□□□□ -1.27
TGA1	tA(UGC)A	PUP2	P32379	260 aa		7.14	□□□□□ -1.27
TGA1	tA(UGC)A	MDH3	P32419	343 aa	Known RBP RIP-Chip data	7.14	□□□□□ -1.27	not detected
TGA1	tA(UGC)A	YIL165C	P40446	119 aa		7.14	□□□□□ -1.27
TGA1	tA(UGC)A	SNL1	P40548	159 aa		7.14	□□□□□ -1.27
TGA1	tA(UGC)A	MDJ2	P42834	146 aa		7.14	□□□□□ -1.27
TGA1	tA(UGC)A	BRR6	P53062	197 aa		7.14	□□□□□ -1.27
TGA1	tA(UGC)A	YGL101W	P53144	215 aa		7.14	□□□□□ -1.27
TGA1	tA(UGC)A	APM1	Q00776	475 aa	Predicted RBP	7.14	□□□□□ -1.27
TGA1	tA(UGC)A	HAS1	Q03532	505 aa	Known RBP	7.14	□□□□□ -1.27
TGA1	tA(UGC)A	AGE1	Q04412	482 aa		7.14	□□□□□ -1.27
TGA1	tA(UGC)A	UIP4	Q08926	304 aa		7.14	□□□□□ -1.27
TGA1	tA(UGC)A	SEC12	P11655	471 aa		7.13	□□□□□ -1.27
TGA1	tA(UGC)A	SNF6	P18888	332 aa		7.13	□□□□□ -1.27
TGA1	tA(UGC)A	ITR1	P30605	584 aa		7.13	□□□□□ -1.27
TGA1	tA(UGC)A	ECM8	P38246	354 aa		7.13	□□□□□ -1.27
TGA1	tA(UGC)A	MLH1	P38920	769 aa		7.13	□□□□□ -1.27
TGA1	tA(UGC)A	ISC1	P40015	477 aa	Known RBP	7.13	□□□□□ -1.27
TGA1	tA(UGC)A	ZRG8	P40021	1076 aa		7.13	□□□□□ -1.27
TGA1	tA(UGC)A	RRG9	P40156	214 aa		7.13	□□□□□ -1.27
TGA1	tA(UGC)A	NIT3	P49954	291 aa		7.13	□□□□□ -1.27
TGA1	tA(UGC)A	YDR102C	Q03864	110 aa		7.13	□□□□□ -1.27
TGA1	tA(UGC)A	BUD5	P25300	642 aa	Predicted RBP	7.12	□□□□□ -1.27
TGA1	tA(UGC)A	RPC82	P32349	654 aa		7.12	□□□□□ -1.27
TGA1	tA(UGC)A	MRPS5	P33759	307 aa		7.12	□□□□□ -1.27
TGA1	tA(UGC)A	MIA40	P36046	403 aa		7.12	□□□□□ -1.27
TGA1	tA(UGC)A	ARN2	P38724	620 aa		7.12	□□□□□ -1.27
TGA1	tA(UGC)A	THO1	P40040	218 aa	Known RBP	7.12	□□□□□ -1.27
TGA1	tA(UGC)A	YER084W	P40057	128 aa		7.12	□□□□□ -1.27
TGA1	tA(UGC)A	YNL165W	P53891	406 aa		7.12	□□□□□ -1.27
TGA1	tA(UGC)A	COG5	P53951	403 aa		7.12	□□□□□ -1.27
TGA1	tA(UGC)A	MRP51	Q02950	344 aa		7.12	□□□□□ -1.27
TGA1	tA(UGC)A	YMR226C	Q05016	267 aa	Known RBP	7.12	□□□□□ -1.27
TGA1	tA(UGC)A	YOR289W	Q12012	251 aa	Predicted RBP	7.12	□□□□□ -1.27
TGA1	tA(UGC)A	URA2	P07259	2214 aa	Known RBP	7.11	□□□□□ -1.27
TGA1	tA(UGC)A	ATR1	P13090	542 aa		7.11	□□□□□ -1.27
TGA1	tA(UGC)A	PDA1	P16387	420 aa	Known RBP	7.11	□□□□□ -1.27
TGA1	tA(UGC)A	CDC3	P32457	520 aa	Known RBP	7.11	□□□□□ -1.27
TGA1	tA(UGC)A	SLM4	P38247	162 aa		7.11	□□□□□ -1.27
TGA1	tA(UGC)A	GAT2	P40209	560 aa		7.11	□□□□□ -1.27
TGA1	tA(UGC)A	ERP6	P53198	216 aa		7.11	□□□□□ -1.27
TGA1	tA(UGC)A	RPL6A	Q02326	176 aa	Known RBP	7.11	□□□□□ -1.27
TGA1	tA(UGC)A	YMR099C	Q03161	297 aa	Known RBP	7.11	□□□□□ -1.27
TGA1	tA(UGC)A	RCE1	Q03530	315 aa		7.11	□□□□□ -1.27
TGA1	tA(UGC)A	OST6	Q03723	332 aa		7.11	□□□□□ -1.27
TGA1	tA(UGC)A	YAP6	Q03935	383 aa		7.11	□□□□□ -1.27
TGA1	tA(UGC)A	SPC19	Q03954	165 aa		7.11	□□□□□ -1.27
TGA1	tA(UGC)A	SMP3	Q04174	516 aa		7.11	□□□□□ -1.27
TGA1	tA(UGC)A	RSA3	Q05942	220 aa	Known RBP	7.11	□□□□□ -1.27
TGA1	tA(UGC)A	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	7.11	□□□□□ -1.27	not detected
TGA1	tA(UGC)A	MIM1	Q08176	113 aa		7.11	□□□□□ -1.27
TGA1	tA(UGC)A	YBL029C-A	Q3E756	94 aa		7.11	□□□□□ -1.27
TGA1	tA(UGC)A	OPI3	P05375	206 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	TPK3	P05986	398 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	URE2	P23202	354 aa	Known RBP	7.1	□□□□□ -1.27
TGA1	tA(UGC)A	CNA1	P23287	553 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	GIT1	P25346	518 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	YCL002C	P25565	263 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	YBR063C	P38083	404 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	AMN1	P38285	549 aa	Predicted RBP	7.1	□□□□□ -1.27
TGA1	tA(UGC)A	SBE22	P38814	852 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	CHL4	P38907	458 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	YER184C	P39961	794 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	MOB2	P43563	287 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	SCY1	P53009	804 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	RRN9	P53437	365 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	CTS2	Q06350	511 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	LOT6	Q07923	191 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	MCH4	Q08268	501 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	YDL007C-A	Q2V2Q0	85 aa		7.1	□□□□□ -1.27
TGA1	tA(UGC)A	PRB1	P09232	635 aa		7.09	□□□□□ -1.27
TGA1	tA(UGC)A	SPO7	P18410	259 aa		7.09	□□□□□ -1.27
TGA1	tA(UGC)A	DBP2	P24783	546 aa	Known RBP	7.09	□□□□□ -1.27
TGA1	tA(UGC)A	VPH2	P32341	215 aa		7.09	□□□□□ -1.27
TGA1	tA(UGC)A	MAL32	P38158	584 aa		7.09	□□□□□ -1.27
TGA1	tA(UGC)A	ELA1	P53861	379 aa	Predicted RBP	7.09	□□□□□ -1.27
TGA1	tA(UGC)A	ACS1	Q01574	713 aa		7.09	□□□□□ -1.27
TGA1	tA(UGC)A	TFB3	Q03290	321 aa		7.09	□□□□□ -1.27
TGA1	tA(UGC)A	SSY1	Q03770	852 aa		7.09	□□□□□ -1.27
TGA1	tA(UGC)A	RVB1	Q03940	463 aa	Known RBP	7.09	□□□□□ -1.27

Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms