RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 SNX4P47057 423 aa-1.25□□□□□ -2.61
snR38snR38 YJR079WP47126 109 aa-1.25□□□□□ -2.61
snR38snR38 ABM1P47146 123 aa-1.25□□□□□ -2.61
snR38snR38 MRX6P48564 524 aa-1.25□□□□□ -2.61
snR38snR38 RPN9Q04062 393 aaKnown RBP-1.25□□□□□ -2.61
snR38snR38 NNT1Q05874 261 aa-1.25□□□□□ -2.61
snR38snR38 STE23Q06010 1027 aa-1.25□□□□□ -2.61
snR38snR38 UBA3Q99344 299 aa-1.25□□□□□ -2.61
snR38snR38 FLO9P39712 1322 aa-1.25□□□□□ -2.61
snR38snR38 FKS1P38631 1876 aaKnown RBP-1.26□□□□□ -2.61
snR38snR38 YHR139C-AO13536 103 aa-1.26□□□□□ -2.61
snR38snR38 MET8P15807 274 aa-1.26□□□□□ -2.61
snR38snR38 VMA2P16140 517 aaKnown RBP-1.26□□□□□ -2.61
snR38snR38 OCA4P25366 362 aa-1.26□□□□□ -2.61
snR38snR38 PBN1P25580 416 aa-1.26□□□□□ -2.61
snR38snR38 AIM29P36154 155 aa-1.26□□□□□ -2.61
snR38snR38 YHR182WP38870 785 aa-1.26□□□□□ -2.61
snR38snR38 SPT8P38915 602 aa-1.26□□□□□ -2.61
snR38snR38 YER076CP40049 302 aa-1.26□□□□□ -2.61
snR38snR38 YGL138CP53122 345 aa-1.26□□□□□ -2.61
snR38snR38 CYT2Q00873 224 aa-1.26□□□□□ -2.61
snR38snR38 PRP42Q03776 544 aaKnown RBP-1.26□□□□□ -2.61
snR38snR38 ERB1Q04660 807 aaKnown RBP-1.26□□□□□ -2.61
snR38snR38 FCF1Q05498 189 aaPredicted RBP-1.26□□□□□ -2.61
snR38snR38 VIK1Q12045 647 aa-1.26□□□□□ -2.61
snR38snR38 MXR2P25566 168 aa-1.27□□□□□ -2.61
snR38snR38 HSP104P31539 908 aaKnown RBP-1.27□□□□□ -2.61
snR38snR38 OLA1P38219 394 aaKnown RBP-1.27□□□□□ -2.61
snR38snR38 INM1P38710 295 aa-1.27□□□□□ -2.61
snR38snR38 PAC11P40960 533 aa-1.27□□□□□ -2.61
snR38snR38 SYS1P41544 203 aa-1.27□□□□□ -2.61
snR38snR38 COG7P53195 279 aa-1.27□□□□□ -2.61
snR38snR38 TIM21P53220 239 aa-1.27□□□□□ -2.61
snR38snR38 YGR266WP53326 701 aa-1.27□□□□□ -2.61
snR38snR38 TVP15Q03860 143 aa-1.27□□□□□ -2.61
snR38snR38 MED2Q12124 431 aa-1.27□□□□□ -2.61
snR38snR38 NFI1Q12216 726 aa-1.27□□□□□ -2.61
snR38snR38 AQY2P0CD90 149 aa-1.28□□□□□ -2.61
snR38snR38 RNA1P11745 407 aaKnown RBP-1.28□□□□□ -2.61
snR38snR38 YHR022CP38763 256 aa-1.28□□□□□ -2.61
snR38snR38 BIG1P38813 335 aa-1.28□□□□□ -2.61
snR38snR38 PMT4P46971 762 aa-1.28□□□□□ -2.61
snR38snR38 YDR541CQ03049 344 aa-1.28□□□□□ -2.61
snR38snR38 OPY2Q06810 360 aa-1.28□□□□□ -2.61
snR38snR38 MRX9Q07349 420 aaKnown RBP-1.28□□□□□ -2.61
snR38snR38 MTR10Q99189 972 aa-1.28□□□□□ -2.61
snR38snR38 DDI2P0CH63 225 aa-1.29□□□□□ -2.62
snR38snR38 DDI3P0CH64 225 aa-1.29□□□□□ -2.62
snR38snR38 TOA2P32774 122 aa-1.29□□□□□ -2.62
snR38snR38 ARN2P38724 620 aa-1.29□□□□□ -2.62
snR38snR38 SUR2P38992 349 aa-1.29□□□□□ -2.62
snR38snR38 OST3P48439 350 aa-1.29□□□□□ -2.62
snR38snR38 MAL13P53338 473 aa-1.29□□□□□ -2.62
snR38snR38 SHS1Q07657 551 aa-1.29□□□□□ -2.62
snR38snR38 GAT3Q07928 141 aa-1.29□□□□□ -2.62
snR38snR38 SFI1Q12369 946 aa-1.29□□□□□ -2.62
snR38snR38 ISD11Q6Q560 94 aa-1.29□□□□□ -2.62
snR38snR38 YEL009C-AA0A023PZF2 135 aa-1.3□□□□□ -2.62
snR38snR38 REP1P03871 373 aa-1.3□□□□□ -2.62
snR38snR38 RPL12AP0CX53 165 aaKnown RBP-1.3□□□□□ -2.62
snR38snR38 RPL12BP0CX54 165 aa-1.3□□□□□ -2.62
snR38snR38 SUR1P33300 382 aa-1.3□□□□□ -2.62
snR38snR38 PHO88P38264 188 aaPredicted RBP-1.3□□□□□ -2.62
snR38snR38 LIF1P53150 421 aa-1.3□□□□□ -2.62
snR38snR38 MPP6P53725 186 aaPredicted RBP-1.3□□□□□ -2.62
snR38snR38 SMP3Q04174 516 aa-1.3□□□□□ -2.62
snR38snR38 YMR130WQ04223 302 aa-1.3□□□□□ -2.62
snR38snR38 PEX12Q04370 399 aa-1.3□□□□□ -2.62
snR38snR38 DCS1Q06151 350 aa-1.3□□□□□ -2.62
snR38snR38 YLL007CQ07799 665 aa-1.3□□□□□ -2.62
snR38snR38 TAF10Q12030 206 aa-1.3□□□□□ -2.62
snR38snR38 MSB2P32334 1306 aa-1.31□□□□□ -2.62
snR38snR38 GCN4P03069 281 aa-1.31□□□□□ -2.62
snR38snR38 CCA1P21269 546 aa-1.31□□□□□ -2.62
snR38snR38 RRP7P25368 297 aaPredicted RBP-1.31□□□□□ -2.62
snR38snR38 MRPL6P32904 214 aa-1.31□□□□□ -2.62
snR38snR38 GON7P46984 123 aa-1.31□□□□□ -2.62
snR38snR38 OCA2P53949 197 aa-1.31□□□□□ -2.62
snR38snR38 MRPS8Q03799 155 aa-1.31□□□□□ -2.62
snR38snR38 YMR114CQ04471 368 aaKnown RBP-1.31□□□□□ -2.62
snR38snR38 SPH1Q06160 661 aa-1.31□□□□□ -2.62
snR38snR38 YDL144CQ07589 356 aa-1.31□□□□□ -2.62
snR38snR38 NSE1Q07913 336 aa-1.31□□□□□ -2.62
snR38snR38 YPL245WQ12179 454 aaKnown RBP-1.31□□□□□ -2.62
snR38snR38 PAN1P32521 1480 aa-1.31□□□□□ -2.62
snR38snR38 OPI3P05375 206 aa-1.32□□□□□ -2.62
snR38snR38 MAS1P10507 462 aa-1.32□□□□□ -2.62
snR38snR38 BMH1P29311 267 aaKnown RBP-1.32□□□□□ -2.62
snR38snR38 KTI12P34253 313 aaKnown RBP-1.32□□□□□ -2.62
snR38snR38 VPS75P53853 264 aa-1.32□□□□□ -2.62
snR38snR38 SML1Q04964 104 aa-1.32□□□□□ -2.62
snR38snR38 RRI2Q12348 645 aa-1.32□□□□□ -2.62
snR38snR38 COX3P00420 269 aa-1.33□□□□□ -2.62
snR38snR38 GAL7P08431 366 aa-1.33□□□□□ -2.62
snR38snR38 GPI10P30777 616 aa-1.33□□□□□ -2.62
snR38snR38 DOG1P38774 246 aa-1.33□□□□□ -2.62
snR38snR38 STN1P38960 494 aa-1.33□□□□□ -2.62
snR38snR38 AVT6P40074 448 aa-1.33□□□□□ -2.62
snR38snR38 DBP6P53734 629 aaKnown RBP-1.33□□□□□ -2.62
snR38snR38 URC2Q04411 772 aa-1.33□□□□□ -2.62
Retrieved 100 of 5,963 RNA–protein pairs in 20 ms