RNA–Protein interactions for RNA: YPR038W

IRC16, Transcript of Dubious open reading frame, yeastyeast

Gene IRC16, Length 360 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC16YPR038W GTO3Q04806 366 aa1.67□□□□□ -2.14
IRC16YPR038W YDR222WQ04925 415 aa1.67□□□□□ -2.14
IRC16YPR038W REP1P03871 373 aa1.66□□□□□ -2.14
IRC16YPR038W SAG1P20840 650 aa1.66□□□□□ -2.14
IRC16YPR038W DAL81P21657 970 aa1.66□□□□□ -2.14
IRC16YPR038W ACB1P31787 87 aa1.66□□□□□ -2.14
IRC16YPR038W MYO3P36006 1272 aa1.66□□□□□ -2.14
IRC16YPR038W YGP1P38616 354 aaKnown RBP1.66□□□□□ -2.14
IRC16YPR038W PES4P39684 611 aa1.66□□□□□ -2.14
IRC16YPR038W BTT1P40314 149 aaPredicted RBP1.66□□□□□ -2.14
IRC16YPR038W ECO1P43605 281 aa1.66□□□□□ -2.14
IRC16YPR038W YGR016WP53209 190 aa1.66□□□□□ -2.14
IRC16YPR038W YNL143CP53908 130 aa1.66□□□□□ -2.14
IRC16YPR038W RDL2Q08742 149 aaKnown RBP1.66□□□□□ -2.14
IRC16YPR038W IES3Q12345 250 aa1.66□□□□□ -2.14
IRC16YPR038W YOR012WQ12351 137 aa1.66□□□□□ -2.14
IRC16YPR038W FRE6Q12473 712 aa1.66□□□□□ -2.14
IRC16YPR038W CBP2P03874 630 aaPredicted RBP1.65□□□□□ -2.15
IRC16YPR038W MET2P08465 486 aa1.65□□□□□ -2.15
IRC16YPR038W RSA4P25382 515 aaKnown RBP1.65□□□□□ -2.15
IRC16YPR038W VPH2P32341 215 aa1.65□□□□□ -2.15
IRC16YPR038W ADH5P38113 351 aaKnown RBP1.65□□□□□ -2.15
IRC16YPR038W ATG12P38316 186 aa1.65□□□□□ -2.15
IRC16YPR038W PRP39P39682 629 aaKnown RBP1.65□□□□□ -2.15
IRC16YPR038W EDC2P40023 145 aaPredicted RBP1.65□□□□□ -2.15
IRC16YPR038W TAF6P53040 516 aa1.65□□□□□ -2.15
IRC16YPR038W YNL146WP53906 100 aa1.65□□□□□ -2.15
IRC16YPR038W YNL040WP53960 456 aaPredicted RBP1.65□□□□□ -2.15
IRC16YPR038W DXO1Q06349 442 aa1.65□□□□□ -2.15
IRC16YPR038W VIK1Q12045 647 aa1.65□□□□□ -2.15
IRC16YPR038W ERP3Q12403 225 aa1.65□□□□□ -2.15
IRC16YPR038W MRX4Q12467 430 aa1.65□□□□□ -2.15
IRC16YPR038W STE3P06783 470 aa1.64□□□□□ -2.15
IRC16YPR038W MRPL20P22354 195 aaPredicted RBP1.64□□□□□ -2.15
IRC16YPR038W VMA5P31412 392 aaKnown RBP1.64□□□□□ -2.15
IRC16YPR038W ALP1P38971 573 aa1.64□□□□□ -2.15
IRC16YPR038W FYV8P46949 817 aaKnown RBP1.64□□□□□ -2.15
IRC16YPR038W PXR1P53335 271 aaPredicted RBP1.64□□□□□ -2.15
IRC16YPR038W AQR1P53943 586 aa1.64□□□□□ -2.15
IRC16YPR038W YPL080CQ02826 108 aa1.64□□□□□ -2.15
IRC16YPR038W RVB1Q03940 463 aaKnown RBP1.64□□□□□ -2.15
IRC16YPR038W PEX30Q06169 523 aa1.64□□□□□ -2.15
IRC16YPR038W DBP9Q06218 594 aaKnown RBP1.64□□□□□ -2.15
IRC16YPR038W YLR012CQ07927 99 aa1.64□□□□□ -2.15
IRC16YPR038W MIM1Q08176 113 aa1.64□□□□□ -2.15
IRC16YPR038W TDH2P00358 332 aaKnown RBP1.63□□□□□ -2.15
IRC16YPR038W TDH3P00359 332 aaKnown RBP RIP-Chip data1.63□□□□□ -2.15not detected
IRC16YPR038W AIM29P36154 155 aa1.63□□□□□ -2.15
IRC16YPR038W YGL114WP53134 725 aa1.63□□□□□ -2.15
IRC16YPR038W YNR066CP53752 436 aa1.63□□□□□ -2.15
IRC16YPR038W ACT1P60010 375 aaKnown RBP1.63□□□□□ -2.15
IRC16YPR038W CDD1Q06549 142 aa1.63□□□□□ -2.15
IRC16YPR038W CLP1Q08685 445 aaPredicted RBP1.63□□□□□ -2.15
IRC16YPR038W YOL163WP0CF20 169 aa1.62□□□□□ -2.15
IRC16YPR038W SPS100P13130 326 aa1.62□□□□□ -2.15
IRC16YPR038W TAL1P15019 335 aaKnown RBP1.62□□□□□ -2.15
IRC16YPR038W SUR1P33300 382 aa1.62□□□□□ -2.15
IRC16YPR038W YIL089WP40500 205 aa1.62□□□□□ -2.15
IRC16YPR038W MIX17Q03667 156 aa1.62□□□□□ -2.15
IRC16YPR038W UBX2Q04228 584 aa1.62□□□□□ -2.15
IRC16YPR038W YDR262WQ12331 272 aa1.62□□□□□ -2.15
IRC16YPR038W KRE1P17260 313 aa1.61□□□□□ -2.15
IRC16YPR038W LAS1P36146 502 aaPredicted RBP1.61□□□□□ -2.15
IRC16YPR038W UFD1P53044 361 aa1.61□□□□□ -2.15
IRC16YPR038W CUE3P53137 624 aaKnown RBP1.61□□□□□ -2.15
IRC16YPR038W RGM1Q00453 211 aa1.61□□□□□ -2.15
IRC16YPR038W ARC18Q05933 178 aaKnown RBP1.61□□□□□ -2.15
IRC16YPR038W SPO24Q3E752 67 aa1.61□□□□□ -2.15
IRC16YPR038W RNR2P09938 399 aaKnown RBP1.6□□□□□ -2.15
IRC16YPR038W YAK1P14680 807 aa1.6□□□□□ -2.15
IRC16YPR038W ERD1P16151 362 aa1.6□□□□□ -2.15
IRC16YPR038W VPS1P21576 704 aaKnown RBP1.6□□□□□ -2.15
IRC16YPR038W MRPL6P32904 214 aa1.6□□□□□ -2.15
IRC16YPR038W YHL044WP38727 235 aa1.6□□□□□ -2.15
IRC16YPR038W LIF1P53150 421 aa1.6□□□□□ -2.15
IRC16YPR038W SEC13Q04491 297 aaKnown RBP1.6□□□□□ -2.15
IRC16YPR038W BUR2Q05949 395 aa1.6□□□□□ -2.15
IRC16YPR038W FEX1Q08913 375 aa1.6□□□□□ -2.15
IRC16YPR038W FEX2Q08991 375 aa1.6□□□□□ -2.15
IRC16YPR038W PFK27Q12471 397 aaPredicted RBP1.6□□□□□ -2.15
IRC16YPR038W SNF6P18888 332 aa1.59□□□□□ -2.15
IRC16YPR038W IFM1P25038 676 aa1.59□□□□□ -2.15
IRC16YPR038W GCG1P32656 232 aaKnown RBP1.59□□□□□ -2.15
IRC16YPR038W PET8P38921 284 aa1.59□□□□□ -2.15
IRC16YPR038W RSM27P53305 110 aa1.59□□□□□ -2.15
IRC16YPR038W YNL095CP53932 642 aa1.59□□□□□ -2.15
IRC16YPR038W YOR292CQ08743 309 aa1.59□□□□□ -2.15
IRC16YPR038W LAG2Q92325 660 aa1.59□□□□□ -2.15
IRC16YPR038W PRE7P23724 241 aaKnown RBP1.58□□□□□ -2.16
IRC16YPR038W YEL043WP32618 956 aa1.58□□□□□ -2.16
IRC16YPR038W CAB3P36076 571 aa1.58□□□□□ -2.16
IRC16YPR038W SIF2P38262 535 aa1.58□□□□□ -2.16
IRC16YPR038W YHR035WP38769 630 aa1.58□□□□□ -2.16
IRC16YPR038W SOP4P39543 234 aaPredicted RBP1.58□□□□□ -2.16
IRC16YPR038W MNN5P46982 586 aa1.58□□□□□ -2.16
IRC16YPR038W SYF2P53277 215 aaPredicted RBP1.58□□□□□ -2.16
IRC16YPR038W IRC4Q03036 179 aa1.58□□□□□ -2.16
IRC16YPR038W NFI1Q12216 726 aa1.58□□□□□ -2.16
IRC16YPR038W POT1P27796 417 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
IRC16YPR038W YBL081WP38180 368 aaKnown RBP1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 40.5 ms