RNA–Protein interactions for RNA: YOL010W

RCL1, Transcript of Endonuclease that cleaves pre-rRNA at site A2 for 18S rRNA biogenesis, yeast

Gene RCL1, Length 1,104 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCL1	YOL010W	ADH6	Q04894	360 aa	Known RBP	4.15	□□□□□ -1.75
RCL1	YOL010W	PAL1	Q05518	499 aa	Known RBP	4.15	□□□□□ -1.75
RCL1	YOL010W	SGT1	Q08446	395 aa		4.15	□□□□□ -1.75
RCL1	YOL010W	PSF1	Q12488	208 aa		4.15	□□□□□ -1.75
RCL1	YOL010W	YKL033W-A	Q86ZR7	236 aa		4.15	□□□□□ -1.75
RCL1	YOL010W	YPR096C	O13587	100 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	RAS2	P01120	322 aa	Known RBP	4.14	□□□□□ -1.75
RCL1	YOL010W	PRP4	P20053	465 aa	Known RBP	4.14	□□□□□ -1.75
RCL1	YOL010W	RPB5	P20434	215 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	YCR051W	P25631	222 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	PTP2	P29461	750 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	UTP11	P34247	250 aa	Predicted RBP	4.14	□□□□□ -1.75
RCL1	YOL010W	SCO2	P38072	301 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	YBR220C	P38318	560 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	YER010C	P40011	234 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	AYR1	P40471	297 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	BIT61	P47041	543 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	MTQ1	P53944	314 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	APM1	Q00776	475 aa	Predicted RBP	4.14	□□□□□ -1.75
RCL1	YOL010W	RVB1	Q03940	463 aa	Known RBP	4.14	□□□□□ -1.75
RCL1	YOL010W	KRE28	Q04431	385 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	SMA2	Q04658	369 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	YMR310C	Q04867	317 aa	Predicted RBP	4.14	□□□□□ -1.75
RCL1	YOL010W	DYN3	Q04949	312 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	RBS1	Q05672	457 aa	Known RBP	4.14	□□□□□ -1.75
RCL1	YOL010W	ATG17	Q06410	417 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	COS7	Q07788	383 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	CMC2	Q3E7A4	109 aa		4.14	□□□□□ -1.75
RCL1	YOL010W	PDX1	P16451	410 aa		4.13	□□□□□ -1.75
RCL1	YOL010W	NUP2	P32499	720 aa		4.13	□□□□□ -1.75
RCL1	YOL010W	RPC34	P32910	317 aa		4.13	□□□□□ -1.75
RCL1	YOL010W	ICS2	P38284	255 aa		4.13	□□□□□ -1.75
RCL1	YOL010W	ARN1	P38731	627 aa		4.13	□□□□□ -1.75
RCL1	YOL010W	VMA22	P38784	181 aa		4.13	□□□□□ -1.75
RCL1	YOL010W	YRB2	P40517	327 aa		4.13	□□□□□ -1.75
RCL1	YOL010W	RLP7	P40693	322 aa	Known RBP	4.13	□□□□□ -1.75
RCL1	YOL010W	IDP2	P41939	412 aa		4.13	□□□□□ -1.75
RCL1	YOL010W	ACS1	Q01574	713 aa		4.13	□□□□□ -1.75
RCL1	YOL010W	YDR249C	Q03787	373 aa		4.13	□□□□□ -1.75
RCL1	YOL010W	SAS5	Q99314	248 aa		4.13	□□□□□ -1.75
RCL1	YOL010W	REP1	P03871	373 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	GPH1	P06738	902 aa	Known RBP	4.12	□□□□□ -1.75
RCL1	YOL010W	DSF1	P0CX08	502 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	YNR073C	P0CX09	502 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	MRP13	P12686	339 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	TFS1	P14306	219 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	AAC3	P18238	307 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	YPK2	P18961	677 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	MDH2	P22133	377 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	CTR86	P25355	563 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	ITR2	P30606	609 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	MDL1	P33310	695 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	MRPL39	P36533	70 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	YBL029W	P38201	376 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	YBR032W	P38223	100 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	YBR242W	P38331	238 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	MTC4	P38335	694 aa	Known RBP	4.12	□□□□□ -1.75
RCL1	YOL010W	MTC6	P38849	526 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	AIM2	P39721	246 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	ECM10	P39987	644 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	NOP16	P40007	231 aa	Known RBP	4.12	□□□□□ -1.75
RCL1	YOL010W	SHO1	P40073	367 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	VHR1	P40522	640 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	YIR020C	P40575	100 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	GAB1	P41733	394 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	LOC1	P43586	204 aa	Predicted RBP	4.12	□□□□□ -1.75
RCL1	YOL010W	AAD10	P47182	288 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	PAC10	P48363	199 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	UBC9	P50623	157 aa	Predicted RBP	4.12	□□□□□ -1.75
RCL1	YOL010W	MRK1	P50873	501 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	RBG2	P53295	368 aa	Known RBP	4.12	□□□□□ -1.75
RCL1	YOL010W	OGG1	P53397	376 aa	Predicted RBP	4.12	□□□□□ -1.75
RCL1	YOL010W	MRPL19	P53875	158 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	RHO4	Q00246	291 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	GTR1	Q00582	310 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	YDR476C	Q03362	224 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	MRPL1	Q04599	285 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	SFH1	Q06168	426 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	YEH2	Q07950	538 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	YKL068W-A	Q3E826	78 aa		4.12	□□□□□ -1.75
RCL1	YOL010W	HIS3	P06633	220 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	ADE5,7	P07244	802 aa	Known RBP	4.11	□□□□□ -1.75
RCL1	YOL010W	CBS1	P14066	229 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	FUS3	P16892	353 aa	Known RBP	4.11	□□□□□ -1.75
RCL1	YOL010W	MCK1	P21965	375 aa	Known RBP	4.11	□□□□□ -1.75
RCL1	YOL010W	SAN1	P22470	610 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	CYS4	P32582	507 aa	Known RBP	4.11	□□□□□ -1.75
RCL1	YOL010W	SDS22	P36047	338 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	YJL068C	P40363	299 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	LYS12	P40495	371 aa	Known RBP	4.11	□□□□□ -1.75
RCL1	YOL010W	YIL029C	P40538	142 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	TDA10	P42938	290 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	CAK1	P43568	368 aa	Predicted RBP	4.11	□□□□□ -1.75
RCL1	YOL010W	NCA3	P46955	337 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	YDL183C	P48569	320 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	VMA10	P48836	114 aa	Known RBP	4.11	□□□□□ -1.75
RCL1	YOL010W	TAF4	P50105	388 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	SBH2	P52871	88 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	DAM1	P53267	343 aa		4.11	□□□□□ -1.75
RCL1	YOL010W	DML1	Q03652	475 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 25 ms