RNA–Protein interactions for RNA: YMR077C

VPS20, Transcript of Myristoylated subunit of the ESCRT-III complex, yeastyeast

Gene VPS20, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS20YMR077C RPL1BP0CX44 217 aaKnown RBP1.25□□□□□ -2.21
VPS20YMR077C ERG9P29704 444 aa1.25□□□□□ -2.21
VPS20YMR077C MPS2P53159 387 aa1.25□□□□□ -2.21
VPS20YMR077C DCR2Q05924 578 aa1.25□□□□□ -2.21
VPS20YMR077C SUE1Q06524 206 aa1.25□□□□□ -2.21
VPS20YMR077C DTD1Q07648 150 aaKnown RBP1.25□□□□□ -2.21
VPS20YMR077C MIM1Q08176 113 aa1.25□□□□□ -2.21
VPS20YMR077C VPH2P32341 215 aa1.24□□□□□ -2.21
VPS20YMR077C YJR141WP47172 347 aaPredicted RBP1.24□□□□□ -2.21
VPS20YMR077C MIG2P53035 382 aa1.24□□□□□ -2.21
VPS20YMR077C SPC19Q03954 165 aa1.24□□□□□ -2.21
VPS20YMR077C APC5Q08683 685 aa1.24□□□□□ -2.21
VPS20YMR077C SPE3Q12074 293 aaKnown RBP1.24□□□□□ -2.21
VPS20YMR077C PRM4Q12498 284 aa1.24□□□□□ -2.21
VPS20YMR077C HIS3P06633 220 aa1.23□□□□□ -2.21
VPS20YMR077C GRR1P24814 1151 aa1.23□□□□□ -2.21
VPS20YMR077C BUD2P33314 1104 aa1.23□□□□□ -2.21
VPS20YMR077C MRX9Q07349 420 aaKnown RBP1.23□□□□□ -2.21
VPS20YMR077C RTC5Q12108 567 aaKnown RBP1.23□□□□□ -2.21
VPS20YMR077C YPL245WQ12179 454 aaKnown RBP1.23□□□□□ -2.21
VPS20YMR077C PRR2Q12310 699 aa1.23□□□□□ -2.21
VPS20YMR077C ZWF1P11412 505 aaKnown RBP1.22□□□□□ -2.21
VPS20YMR077C CKI1P20485 582 aa1.22□□□□□ -2.21
VPS20YMR077C RSM27P53305 110 aa1.22□□□□□ -2.21
VPS20YMR077C AIM29P36154 155 aa1.21□□□□□ -2.22
VPS20YMR077C PIR5P46999 287 aa1.21□□□□□ -2.22
VPS20YMR077C HCH1P53834 153 aa1.21□□□□□ -2.22
VPS20YMR077C NAT4Q04751 285 aa1.21□□□□□ -2.22
VPS20YMR077C SPO77Q06134 477 aa1.21□□□□□ -2.22
VPS20YMR077C BUD21Q08492 214 aaPredicted RBP1.21□□□□□ -2.22
VPS20YMR077C PES4P39684 611 aa1.2□□□□□ -2.22
VPS20YMR077C FYV8P46949 817 aaKnown RBP1.2□□□□□ -2.22
VPS20YMR077C AIM45Q12480 344 aaKnown RBP1.2□□□□□ -2.22
VPS20YMR077C SUR1P33300 382 aa1.19□□□□□ -2.22
VPS20YMR077C FCY21P40039 528 aa1.19□□□□□ -2.22
VPS20YMR077C YJR146WP47174 117 aa1.19□□□□□ -2.22
VPS20YMR077C BIO4P53630 237 aa1.19□□□□□ -2.22
VPS20YMR077C ALG9P53868 555 aaKnown RBP1.19□□□□□ -2.22
VPS20YMR077C OSH6Q02201 448 aa1.19□□□□□ -2.22
VPS20YMR077C REP1P03871 373 aa1.18□□□□□ -2.22
VPS20YMR077C MMS21P38632 267 aa1.18□□□□□ -2.22
VPS20YMR077C YNR066CP53752 436 aa1.18□□□□□ -2.22
VPS20YMR077C DCP1Q12517 231 aaPredicted RBP1.18□□□□□ -2.22
VPS20YMR077C UTR1P21373 530 aa1.17□□□□□ -2.22
VPS20YMR077C MXR2P25566 168 aa1.17□□□□□ -2.22
VPS20YMR077C ARC18Q05933 178 aaKnown RBP1.17□□□□□ -2.22
VPS20YMR077C YFH1Q07540 174 aa1.17□□□□□ -2.22
VPS20YMR077C DCC1P25559 380 aa1.16□□□□□ -2.22
VPS20YMR077C GRE3P38715 327 aaKnown RBP RIP-Chip data1.16□□□□□ -2.22not detected
VPS20YMR077C VIK1Q12045 647 aa1.16□□□□□ -2.22
VPS20YMR077C RAD1P06777 1100 aa1.15□□□□□ -2.23
VPS20YMR077C YHR045WP38775 560 aa1.15□□□□□ -2.23
VPS20YMR077C LSM4P40070 187 aaKnown RBP1.15□□□□□ -2.23
VPS20YMR077C YJL027CP47063 138 aaPredicted RBP1.15□□□□□ -2.23
VPS20YMR077C EBS1Q03466 884 aaKnown RBP1.15□□□□□ -2.23
VPS20YMR077C GYL1Q04322 720 aa1.15□□□□□ -2.23
VPS20YMR077C EMC6Q12431 108 aa1.15□□□□□ -2.23
VPS20YMR077C SYS1P41544 203 aa1.14□□□□□ -2.23
VPS20YMR077C YHC3P47040 408 aa1.14□□□□□ -2.23
VPS20YMR077C LIF1P53150 421 aa1.14□□□□□ -2.23
VPS20YMR077C GRH1Q04410 372 aaKnown RBP1.14□□□□□ -2.23
VPS20YMR077C SFG1Q12507 346 aa1.14□□□□□ -2.23
VPS20YMR077C TDH1P00360 332 aaKnown RBP1.13□□□□□ -2.23
VPS20YMR077C DPM1P14020 267 aaKnown RBP1.13□□□□□ -2.23
VPS20YMR077C TRM7P38238 310 aaKnown RBP1.13□□□□□ -2.23
VPS20YMR077C IML3P38265 245 aa1.13□□□□□ -2.23
VPS20YMR077C MLC1P53141 149 aa1.13□□□□□ -2.23
VPS20YMR077C COS6P53344 381 aa1.13□□□□□ -2.23
VPS20YMR077C RDL2Q08742 149 aaKnown RBP1.13□□□□□ -2.23
VPS20YMR077C GLE1Q12315 538 aa1.13□□□□□ -2.23
VPS20YMR077C PEX32P38292 413 aa1.12□□□□□ -2.23
VPS20YMR077C YGR266WP53326 701 aa1.12□□□□□ -2.23
VPS20YMR077C SEC13Q04491 297 aaKnown RBP1.12□□□□□ -2.23
VPS20YMR077C YOR292CQ08743 309 aa1.12□□□□□ -2.23
VPS20YMR077C THR4P16120 514 aaKnown RBP1.11□□□□□ -2.23
VPS20YMR077C MRPL6P32904 214 aa1.11□□□□□ -2.23
VPS20YMR077C YMR134WP40207 237 aa1.11□□□□□ -2.23
VPS20YMR077C SLM2P53955 656 aa1.11□□□□□ -2.23
VPS20YMR077C MAS1P10507 462 aa1.1□□□□□ -2.23
VPS20YMR077C SPS100P13130 326 aa1.1□□□□□ -2.23
VPS20YMR077C HMX1P32339 317 aa1.1□□□□□ -2.23
VPS20YMR077C PET8P38921 284 aa1.1□□□□□ -2.23
VPS20YMR077C EFM4P40516 257 aa1.1□□□□□ -2.23
VPS20YMR077C MND1P53102 219 aa1.1□□□□□ -2.23
VPS20YMR077C YPL150WQ12152 901 aa1.1□□□□□ -2.23
VPS20YMR077C YFL064CP43540 174 aa1.09□□□□□ -2.23
VPS20YMR077C NNT1Q05874 261 aa1.09□□□□□ -2.23
VPS20YMR077C YAL063C-AQ3E791 96 aa1.09□□□□□ -2.23
VPS20YMR077C BOL1Q3E793 110 aa1.09□□□□□ -2.23
VPS20YMR077C PUP2P32379 260 aa1.08□□□□□ -2.24
VPS20YMR077C MEI5P32489 222 aa1.08□□□□□ -2.24
VPS20YMR077C COY1P34237 679 aa1.08□□□□□ -2.24
VPS20YMR077C MBA1P38300 278 aa1.08□□□□□ -2.24
VPS20YMR077C YMR310CQ04867 317 aaPredicted RBP1.08□□□□□ -2.24
VPS20YMR077C AGC1Q12482 902 aa1.08□□□□□ -2.24
VPS20YMR077C HSP82P02829 709 aaKnown RBP1.07□□□□□ -2.24
VPS20YMR077C YHR122WP38829 231 aa1.07□□□□□ -2.24
VPS20YMR077C MRPL49P40858 161 aaPredicted RBP1.07□□□□□ -2.24
VPS20YMR077C TVP15Q03860 143 aa1.07□□□□□ -2.24
VPS20YMR077C SMC6Q12749 1114 aa1.07□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms