RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C ACT1P60010 375 aaKnown RBP1.78□□□□□ -2.12
UBX4YMR067C YPL080CQ02826 108 aa1.78□□□□□ -2.12
UBX4YMR067C CDD1Q06549 142 aa1.78□□□□□ -2.12
UBX4YMR067C MRX9Q07349 420 aaKnown RBP1.78□□□□□ -2.12
UBX4YMR067C ERP3Q12403 225 aa1.78□□□□□ -2.12
UBX4YMR067C MRX4Q12467 430 aa1.78□□□□□ -2.12
UBX4YMR067C SKS1Q12505 502 aa1.78□□□□□ -2.12
UBX4YMR067C REP1P03871 373 aa1.77□□□□□ -2.13
UBX4YMR067C DAD2P36162 133 aa1.77□□□□□ -2.13
UBX4YMR067C FEX1Q08913 375 aa1.77□□□□□ -2.13
UBX4YMR067C FEX2Q08991 375 aa1.77□□□□□ -2.13
UBX4YMR067C YPL245WQ12179 454 aaKnown RBP1.77□□□□□ -2.13
UBX4YMR067C IES3Q12345 250 aa1.77□□□□□ -2.13
UBX4YMR067C KRE1P17260 313 aa1.76□□□□□ -2.13
UBX4YMR067C SNF6P18888 332 aa1.76□□□□□ -2.13
UBX4YMR067C VPH2P32341 215 aa1.76□□□□□ -2.13
UBX4YMR067C JEM1P40358 645 aa1.76□□□□□ -2.13
UBX4YMR067C NBL1Q3E7Y6 73 aa1.76□□□□□ -2.13
UBX4YMR067C RGS2Q99188 309 aa1.76□□□□□ -2.13
UBX4YMR067C RBK1P25332 333 aa1.75□□□□□ -2.13
UBX4YMR067C IML3P38265 245 aa1.75□□□□□ -2.13
UBX4YMR067C EDC2P40023 145 aaPredicted RBP1.75□□□□□ -2.13
UBX4YMR067C MNN5P46982 586 aa1.75□□□□□ -2.13
UBX4YMR067C YNL095CP53932 642 aa1.75□□□□□ -2.13
UBX4YMR067C MIM1Q08176 113 aa1.75□□□□□ -2.13
UBX4YMR067C YOL163WP0CF20 169 aa1.74□□□□□ -2.13
UBX4YMR067C MRPL20P22354 195 aaPredicted RBP1.74□□□□□ -2.13
UBX4YMR067C YPS1P32329 569 aa1.74□□□□□ -2.13
UBX4YMR067C YHL044WP38727 235 aa1.74□□□□□ -2.13
UBX4YMR067C UFD1P53044 361 aa1.74□□□□□ -2.13
UBX4YMR067C EOS1P53938 366 aa1.74□□□□□ -2.13
UBX4YMR067C RDL2Q08742 149 aaKnown RBP1.74□□□□□ -2.13
UBX4YMR067C YOR012WQ12351 137 aa1.74□□□□□ -2.13
UBX4YMR067C CBP2P03874 630 aaPredicted RBP1.73□□□□□ -2.13
UBX4YMR067C YLL053CP0CD98 152 aa1.73□□□□□ -2.13
UBX4YMR067C HXT2P23585 541 aa1.73□□□□□ -2.13
UBX4YMR067C CIN8P27895 1000 aa1.73□□□□□ -2.13
UBX4YMR067C MEI5P32489 222 aa1.73□□□□□ -2.13
UBX4YMR067C MYO3P36006 1272 aa1.73□□□□□ -2.13
UBX4YMR067C YBL081WP38180 368 aaKnown RBP1.73□□□□□ -2.13
UBX4YMR067C PES4P39684 611 aa1.73□□□□□ -2.13
UBX4YMR067C PCL7P40186 285 aa1.73□□□□□ -2.13
UBX4YMR067C BTT1P40314 149 aaPredicted RBP1.73□□□□□ -2.13
UBX4YMR067C FYV8P46949 817 aaKnown RBP1.73□□□□□ -2.13
UBX4YMR067C VIK1Q12045 647 aa1.73□□□□□ -2.13
UBX4YMR067C YER084WP40057 128 aa1.72□□□□□ -2.13
UBX4YMR067C YNR066CP53752 436 aa1.72□□□□□ -2.13
UBX4YMR067C YLR012CQ07927 99 aa1.72□□□□□ -2.13
UBX4YMR067C YAK1P14680 807 aa1.71□□□□□ -2.14
UBX4YMR067C ACB1P31787 87 aa1.71□□□□□ -2.14
UBX4YMR067C SUR1P33300 382 aa1.71□□□□□ -2.14
UBX4YMR067C AIM29P36154 155 aa1.71□□□□□ -2.14
UBX4YMR067C ADH5P38113 351 aaKnown RBP1.71□□□□□ -2.14
UBX4YMR067C TAF6P53040 516 aa1.71□□□□□ -2.14
UBX4YMR067C SYF2P53277 215 aaPredicted RBP1.71□□□□□ -2.14
UBX4YMR067C UBX2Q04228 584 aa1.71□□□□□ -2.14
UBX4YMR067C CDC42P19073 191 aa1.7□□□□□ -2.14
UBX4YMR067C CAB3P36076 571 aa1.7□□□□□ -2.14
UBX4YMR067C RXT2P38255 430 aa1.7□□□□□ -2.14
UBX4YMR067C YIL089WP40500 205 aa1.7□□□□□ -2.14
UBX4YMR067C LIF1P53150 421 aa1.7□□□□□ -2.14
UBX4YMR067C PXR1P53335 271 aaPredicted RBP1.7□□□□□ -2.14
UBX4YMR067C YNL143CP53908 130 aa1.7□□□□□ -2.14
UBX4YMR067C RVB1Q03940 463 aaKnown RBP1.7□□□□□ -2.14
UBX4YMR067C PFK27Q12471 397 aaPredicted RBP1.7□□□□□ -2.14
UBX4YMR067C SPS100P13130 326 aa1.69□□□□□ -2.14
UBX4YMR067C SAG1P20840 650 aa1.69□□□□□ -2.14
UBX4YMR067C VPS1P21576 704 aaKnown RBP1.69□□□□□ -2.14
UBX4YMR067C PRE7P23724 241 aaKnown RBP1.69□□□□□ -2.14
UBX4YMR067C ALP1P38971 573 aa1.69□□□□□ -2.14
UBX4YMR067C PRP39P39682 629 aaKnown RBP1.69□□□□□ -2.14
UBX4YMR067C YGR016WP53209 190 aa1.69□□□□□ -2.14
UBX4YMR067C SEC13Q04491 297 aaKnown RBP1.69□□□□□ -2.14
UBX4YMR067C YOR283WQ12040 230 aaKnown RBP1.69□□□□□ -2.14
UBX4YMR067C ERP4Q12450 207 aa1.69□□□□□ -2.14
UBX4YMR067C STE3P06783 470 aa1.68□□□□□ -2.14
UBX4YMR067C VMA5P31412 392 aaKnown RBP1.68□□□□□ -2.14
UBX4YMR067C MED6P38782 295 aa1.68□□□□□ -2.14
UBX4YMR067C PET8P38921 284 aa1.68□□□□□ -2.14
UBX4YMR067C NBP1P52919 319 aaPredicted RBP1.68□□□□□ -2.14
UBX4YMR067C YNL146WP53906 100 aa1.68□□□□□ -2.14
UBX4YMR067C ARC18Q05933 178 aaKnown RBP1.68□□□□□ -2.14
UBX4YMR067C GCG1P32656 232 aaKnown RBP1.67□□□□□ -2.14
UBX4YMR067C MRPL6P32904 214 aa1.67□□□□□ -2.14
UBX4YMR067C CLB6P32943 380 aa1.67□□□□□ -2.14
UBX4YMR067C RSM27P53305 110 aa1.67□□□□□ -2.14
UBX4YMR067C AQR1P53943 586 aa1.67□□□□□ -2.14
UBX4YMR067C DBP9Q06218 594 aaKnown RBP1.67□□□□□ -2.14
UBX4YMR067C YOR292CQ08743 309 aa1.67□□□□□ -2.14
UBX4YMR067C TIM22Q12328 207 aa1.67□□□□□ -2.14
UBX4YMR067C FRE6Q12473 712 aa1.67□□□□□ -2.14
UBX4YMR067C SPO24Q3E752 67 aa1.67□□□□□ -2.14
UBX4YMR067C ZWF1P11412 505 aaKnown RBP1.66□□□□□ -2.14
UBX4YMR067C IFM1P25038 676 aa1.66□□□□□ -2.14
UBX4YMR067C SOP4P39543 234 aaPredicted RBP1.66□□□□□ -2.14
UBX4YMR067C YGL114WP53134 725 aa1.66□□□□□ -2.14
UBX4YMR067C YDR262WQ12331 272 aa1.66□□□□□ -2.14
UBX4YMR067C LAG2Q92325 660 aa1.66□□□□□ -2.14
UBX4YMR067C ERD1P16151 362 aa1.65□□□□□ -2.15
UBX4YMR067C YFL064CP43540 174 aa1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms