RNA–Protein interactions for RNA: YMR047C

NUP116, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP116, Length 3,342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP116YMR047C CDC5P32562 705 aa4.51□□□□□ -1.69
NUP116YMR047C COX13P32799 129 aa4.51□□□□□ -1.69
NUP116YMR047C SRP102P36057 244 aaPredicted RBP4.51□□□□□ -1.69
NUP116YMR047C TAT1P38085 619 aa4.51□□□□□ -1.69
NUP116YMR047C YBR137WP38276 179 aa4.51□□□□□ -1.69
NUP116YMR047C PRM10P42946 383 aa4.51□□□□□ -1.69
NUP116YMR047C AAT1Q01802 451 aa4.51□□□□□ -1.69
NUP116YMR047C NEJ1Q06148 342 aa4.51□□□□□ -1.69
NUP116YMR047C YPR196WQ06595 470 aa4.51□□□□□ -1.69
NUP116YMR047C CDC21P06785 304 aa4.51□□□□□ -1.69
NUP116YMR047C ATR1P13090 542 aa4.51□□□□□ -1.69
NUP116YMR047C HOP1P20050 605 aa4.51□□□□□ -1.69
NUP116YMR047C MGR1P25573 417 aa4.51□□□□□ -1.69
NUP116YMR047C SUR2P38992 349 aa4.51□□□□□ -1.69
NUP116YMR047C RBG1P39729 369 aa4.51□□□□□ -1.69
NUP116YMR047C YIL152WP40455 235 aa4.51□□□□□ -1.69
NUP116YMR047C APQ12P40532 138 aa4.51□□□□□ -1.69
NUP116YMR047C RPE1P46969 238 aa4.51□□□□□ -1.69
NUP116YMR047C PKP2P53170 491 aa4.51□□□□□ -1.69
NUP116YMR047C YGR042WP53227 271 aa4.51□□□□□ -1.69
NUP116YMR047C PRM4Q12498 284 aa4.51□□□□□ -1.69
NUP116YMR047C SLY41P22215 453 aa4.51□□□□□ -1.69
NUP116YMR047C CMK2P22517 447 aa4.51□□□□□ -1.69
NUP116YMR047C YCR102CP25608 368 aa4.51□□□□□ -1.69
NUP116YMR047C AIM29P36154 155 aa4.51□□□□□ -1.69
NUP116YMR047C YCR087C-AP37263 153 aa4.51□□□□□ -1.69
NUP116YMR047C INM1P38710 295 aa4.51□□□□□ -1.69
NUP116YMR047C YER121WP40076 114 aa4.51□□□□□ -1.69
NUP116YMR047C PEP8P40335 379 aa4.51□□□□□ -1.69
NUP116YMR047C MRX5P47007 382 aa4.51□□□□□ -1.69
NUP116YMR047C GTR2P53290 341 aa4.51□□□□□ -1.69
NUP116YMR047C DIA1P54005 336 aa4.51□□□□□ -1.69
NUP116YMR047C MDM30Q05930 598 aa4.51□□□□□ -1.69
NUP116YMR047C IZH3Q07959 543 aa4.51□□□□□ -1.69
NUP116YMR047C BDS1Q08347 646 aa4.51□□□□□ -1.69
NUP116YMR047C GPB1Q08886 897 aa4.51□□□□□ -1.69
NUP116YMR047C ERG27Q12452 347 aaKnown RBP4.51□□□□□ -1.69
NUP116YMR047C MHT1Q12525 324 aa4.51□□□□□ -1.69
NUP116YMR047C Q0144Q9ZZW2 109 aa4.51□□□□□ -1.69
NUP116YMR047C TOR1P35169 2470 aa4.5□□□□□ -1.69
NUP116YMR047C STE7P06784 515 aa4.5□□□□□ -1.69
NUP116YMR047C YBR220CP38318 560 aa4.5□□□□□ -1.69
NUP116YMR047C PHM8P40025 321 aa4.5□□□□□ -1.69
NUP116YMR047C NTA1P40354 457 aa4.5□□□□□ -1.69
NUP116YMR047C FKH2P41813 862 aa4.5□□□□□ -1.69
NUP116YMR047C PMT5P52867 743 aa4.5□□□□□ -1.69
NUP116YMR047C CWC23P52868 283 aaPredicted RBP4.5□□□□□ -1.69
NUP116YMR047C DOC1P53068 250 aa4.5□□□□□ -1.69
NUP116YMR047C GPG1P53130 126 aa4.5□□□□□ -1.69
NUP116YMR047C NSA1P53136 463 aaPredicted RBP4.5□□□□□ -1.69
NUP116YMR047C YNR062CP53748 327 aa4.5□□□□□ -1.69
NUP116YMR047C BUR2Q05949 395 aa4.5□□□□□ -1.69
NUP116YMR047C MCA1Q08601 432 aa4.5□□□□□ -1.69
NUP116YMR047C RAD7P06779 565 aa4.5□□□□□ -1.69
NUP116YMR047C RHO2P06781 192 aa4.5□□□□□ -1.69
NUP116YMR047C ERD2P18414 219 aa4.5□□□□□ -1.69
NUP116YMR047C RNP1P32385 249 aa4.5□□□□□ -1.69
NUP116YMR047C CHS7P38843 316 aa4.5□□□□□ -1.69
NUP116YMR047C VRG4P40107 337 aa4.5□□□□□ -1.69
NUP116YMR047C MTR3P48240 250 aaPredicted RBP4.5□□□□□ -1.69
NUP116YMR047C DUO1P53168 247 aaKnown RBP4.5□□□□□ -1.69
NUP116YMR047C PLB2Q03674 706 aa4.5□□□□□ -1.69
NUP116YMR047C TVP15Q03860 143 aa4.5□□□□□ -1.69
NUP116YMR047C ERF2Q06551 359 aa4.5□□□□□ -1.69
NUP116YMR047C RAD34Q06665 692 aa4.5□□□□□ -1.69
NUP116YMR047C NGL1Q08213 363 aaKnown RBP4.5□□□□□ -1.69
NUP116YMR047C YHR213W-AQ8TGT4 77 aa4.5□□□□□ -1.69
NUP116YMR047C CYT1P07143 309 aa4.49□□□□□ -1.69
NUP116YMR047C NUP2P32499 720 aa4.49□□□□□ -1.69
NUP116YMR047C CTP1P38152 299 aa4.49□□□□□ -1.69
NUP116YMR047C UIP3P39547 235 aa4.49□□□□□ -1.69
NUP116YMR047C SPT20P50875 604 aa4.49□□□□□ -1.69
NUP116YMR047C OCA2P53949 197 aa4.49□□□□□ -1.69
NUP116YMR047C LSM3P57743 89 aaKnown RBP4.49□□□□□ -1.69
NUP116YMR047C FMP45Q07651 309 aa4.49□□□□□ -1.69
NUP116YMR047C YPL272CQ08984 517 aa4.49□□□□□ -1.69
NUP116YMR047C DFG16Q99234 619 aa4.49□□□□□ -1.69
NUP116YMR047C ATP2P00830 511 aaKnown RBP4.49□□□□□ -1.69
NUP116YMR047C HTA2P04912 132 aa4.49□□□□□ -1.69
NUP116YMR047C STP22P25604 385 aa4.49□□□□□ -1.69
NUP116YMR047C UBC8P28263 218 aa4.49□□□□□ -1.69
NUP116YMR047C TOD6P34219 525 aa4.49□□□□□ -1.69
NUP116YMR047C SDT1P53078 280 aa4.49□□□□□ -1.69
NUP116YMR047C HCH1P53834 153 aa4.49□□□□□ -1.69
NUP116YMR047C TIM10P87108 93 aa4.49□□□□□ -1.69
NUP116YMR047C YDR124WQ04608 324 aa4.49□□□□□ -1.69
NUP116YMR047C ASA1Q06822 443 aa4.49□□□□□ -1.69
NUP116YMR047C MFG1Q07684 458 aa4.49□□□□□ -1.69
NUP116YMR047C UPC2Q12151 913 aa4.49□□□□□ -1.69
NUP116YMR047C UBX3Q12229 455 aa4.49□□□□□ -1.69
NUP116YMR047C YPL247CQ12523 523 aa4.49□□□□□ -1.69
NUP116YMR047C POL2P21951 2222 aaKnown RBP4.49□□□□□ -1.69
NUP116YMR047C HTB1P02293 131 aaKnown RBP4.49□□□□□ -1.69
NUP116YMR047C HTB2P02294 131 aa4.49□□□□□ -1.69
NUP116YMR047C CDC7P06243 507 aa4.49□□□□□ -1.69
NUP116YMR047C OMA1P36163 345 aa4.49□□□□□ -1.69
NUP116YMR047C FAT1P38225 669 aa4.49□□□□□ -1.69
NUP116YMR047C YHR122WP38829 231 aa4.49□□□□□ -1.69
NUP116YMR047C MIT1P40002 666 aa4.49□□□□□ -1.69
NUP116YMR047C MAM33P40513 266 aa4.49□□□□□ -1.69
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms