RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	INP2	Q03824	705 aa		3.19	□□□□□ -1.9
EBP2	YKL172W	CAB5	Q03941	241 aa		3.19	□□□□□ -1.9
EBP2	YKL172W	REX3	Q12090	404 aa		3.19	□□□□□ -1.9
EBP2	YKL172W	FLO11	P08640	1367 aa		3.18	□□□□□ -1.9
EBP2	YKL172W	GCD2	P12754	651 aa	Predicted RBP	3.18	□□□□□ -1.9
EBP2	YKL172W	CYM1	P32898	989 aa		3.18	□□□□□ -1.9
EBP2	YKL172W	SKG6	P32900	734 aa	Predicted RBP	3.18	□□□□□ -1.9
EBP2	YKL172W	SWC5	P38326	303 aa		3.18	□□□□□ -1.9
EBP2	YKL172W	RRG9	P40156	214 aa		3.18	□□□□□ -1.9
EBP2	YKL172W	INP1	Q03694	420 aa		3.18	□□□□□ -1.9
EBP2	YKL172W	YPR1	Q12458	312 aa		3.18	□□□□□ -1.9
EBP2	YKL172W	CCH1	P50077	2039 aa		3.17	□□□□□ -1.9
EBP2	YKL172W	ERD1	P16151	362 aa		3.17	□□□□□ -1.9
EBP2	YKL172W	BDH1	P39714	382 aa		3.17	□□□□□ -1.9
EBP2	YKL172W	PFS2	P42841	465 aa	Known RBP	3.17	□□□□□ -1.9
EBP2	YKL172W	LOH1	P47055	219 aa		3.17	□□□□□ -1.9
EBP2	YKL172W	FMP48	P53233	369 aa		3.17	□□□□□ -1.9
EBP2	YKL172W	OKP1	P53298	406 aa		3.17	□□□□□ -1.9
EBP2	YKL172W	DIB1	Q06819	143 aa	Predicted RBP	3.17	□□□□□ -1.9
EBP2	YKL172W	PRM7	Q12459	698 aa		3.17	□□□□□ -1.9
EBP2	YKL172W	SPS100	P13130	326 aa		3.16	□□□□□ -1.9
EBP2	YKL172W	ZRT1	P32804	376 aa		3.16	□□□□□ -1.9
EBP2	YKL172W	SLM1	P40485	686 aa		3.16	□□□□□ -1.9
EBP2	YKL172W	YFL040W	P43562	540 aa		3.16	□□□□□ -1.9
EBP2	YKL172W	YPL080C	Q02826	108 aa		3.16	□□□□□ -1.9
EBP2	YKL172W	SAM4	Q08985	325 aa	Known RBP	3.16	□□□□□ -1.9
EBP2	YKL172W	VIK1	Q12045	647 aa		3.16	□□□□□ -1.9
EBP2	YKL172W	DFM1	Q12743	341 aa	Known RBP	3.16	□□□□□ -1.9
EBP2	YKL172W	SAR1	P20606	190 aa	Known RBP	3.15	□□□□□ -1.91
EBP2	YKL172W	COX10	P21592	462 aa		3.15	□□□□□ -1.91
EBP2	YKL172W	ZRT3	P34240	503 aa		3.15	□□□□□ -1.91
EBP2	YKL172W	SOP4	P39543	234 aa	Predicted RBP	3.15	□□□□□ -1.91
EBP2	YKL172W	OSW5	P40219	148 aa		3.15	□□□□□ -1.91
EBP2	YKL172W	VOA1	P53262	265 aa		3.15	□□□□□ -1.91
EBP2	YKL172W	APJ1	P53940	528 aa		3.15	□□□□□ -1.91
EBP2	YKL172W	YMR244W	Q04018	355 aa		3.15	□□□□□ -1.91
EBP2	YKL172W	SNX41	Q04053	625 aa		3.15	□□□□□ -1.91
EBP2	YKL172W	UTP23	Q12339	254 aa	Known RBP	3.15	□□□□□ -1.91
EBP2	YKL172W	TRM10	Q12400	293 aa		3.15	□□□□□ -1.91
EBP2	YKL172W	CUP2	P15315	225 aa		3.14	□□□□□ -1.91
EBP2	YKL172W	MRPL20	P22354	195 aa	Predicted RBP	3.14	□□□□□ -1.91
EBP2	YKL172W	IFM1	P25038	676 aa		3.14	□□□□□ -1.91
EBP2	YKL172W	YKL162C	P36052	402 aa		3.14	□□□□□ -1.91
EBP2	YKL172W	DSE1	P40077	573 aa		3.14	□□□□□ -1.91
EBP2	YKL172W	COX16	P47081	118 aa		3.14	□□□□□ -1.91
EBP2	YKL172W	ZRG17	P53735	605 aa		3.14	□□□□□ -1.91
EBP2	YKL172W	SMD1	Q02260	146 aa	Predicted RBP	3.14	□□□□□ -1.91
EBP2	YKL172W	ECM19	Q06011	112 aa		3.14	□□□□□ -1.91
EBP2	YKL172W	YDL211C	Q12121	372 aa		3.14	□□□□□ -1.91
EBP2	YKL172W	TFC7	Q12415	435 aa		3.14	□□□□□ -1.91
EBP2	YKL172W	PAA1	Q12447	191 aa	Known RBP	3.14	□□□□□ -1.91
EBP2	YKL172W	IZH4	Q99393	312 aa		3.14	□□□□□ -1.91
EBP2	YKL172W	BI3	Q9ZZW7	517 aa		3.14	□□□□□ -1.91
EBP2	YKL172W	CPT1	P17898	393 aa		3.13	□□□□□ -1.91
EBP2	YKL172W	RPL5	P26321	297 aa	Known RBP	3.13	□□□□□ -1.91
EBP2	YKL172W	INO2	P26798	304 aa		3.13	□□□□□ -1.91
EBP2	YKL172W	AST1	P35183	429 aa		3.13	□□□□□ -1.91
EBP2	YKL172W	MNN9	P39107	395 aa	Known RBP	3.13	□□□□□ -1.91
EBP2	YKL172W	PES4	P39684	611 aa		3.13	□□□□□ -1.91
EBP2	YKL172W	CDC40	P40968	455 aa	Predicted RBP	3.13	□□□□□ -1.91
EBP2	YKL172W	RIB4	P50861	169 aa	Predicted RBP	3.13	□□□□□ -1.91
EBP2	YKL172W	YGL118C	P53132	145 aa		3.13	□□□□□ -1.91
EBP2	YKL172W	YGR266W	P53326	701 aa		3.13	□□□□□ -1.91
EBP2	YKL172W	YNR066C	P53752	436 aa		3.13	□□□□□ -1.91
EBP2	YKL172W	MIM1	Q08176	113 aa		3.13	□□□□□ -1.91
EBP2	YKL172W	MDY2	Q12285	212 aa		3.13	□□□□□ -1.91
EBP2	YKL172W	CAR2	P07991	424 aa	Known RBP	3.12	□□□□□ -1.91
EBP2	YKL172W	RPL16B	P26785	198 aa	Known RBP	3.12	□□□□□ -1.91
EBP2	YKL172W	VPH2	P32341	215 aa		3.12	□□□□□ -1.91
EBP2	YKL172W	MCH2	P36032	473 aa		3.12	□□□□□ -1.91
EBP2	YKL172W	YMR262W	P38430	313 aa		3.12	□□□□□ -1.91
EBP2	YKL172W	PET8	P38921	284 aa		3.12	□□□□□ -1.91
EBP2	YKL172W	FET3	P38993	636 aa		3.12	□□□□□ -1.91
EBP2	YKL172W	SWC4	P53201	476 aa		3.12	□□□□□ -1.91
EBP2	YKL172W	DBP6	P53734	629 aa	Known RBP	3.12	□□□□□ -1.91
EBP2	YKL172W	ABZ2	Q03266	374 aa		3.12	□□□□□ -1.91
EBP2	YKL172W	RRG8	Q06109	277 aa		3.12	□□□□□ -1.91
EBP2	YKL172W	YPR195C	Q06594	109 aa		3.12	□□□□□ -1.91
EBP2	YKL172W	DCP1	Q12517	231 aa	Predicted RBP	3.12	□□□□□ -1.91
EBP2	YKL172W	LAG2	Q92325	660 aa		3.12	□□□□□ -1.91
EBP2	YKL172W	FAB1	P34756	2278 aa		3.11	□□□□□ -1.91
EBP2	YKL172W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
EBP2	YKL172W	CSE1	P33307	960 aa		3.11	□□□□□ -1.91
EBP2	YKL172W	COS4	P43542	379 aa		3.11	□□□□□ -1.91
EBP2	YKL172W	LOC1	P43586	204 aa	Predicted RBP	3.11	□□□□□ -1.91
EBP2	YKL172W	CAX4	P53223	239 aa		3.11	□□□□□ -1.91
EBP2	YKL172W	VAC14	Q06708	880 aa		3.11	□□□□□ -1.91
EBP2	YKL172W	PBP4	Q07362	185 aa	Known RBP	3.11	□□□□□ -1.91
EBP2	YKL172W	SIA1	Q12212	622 aa		3.11	□□□□□ -1.91
EBP2	YKL172W	RAD7	P06779	565 aa		3.1	□□□□□ -1.91
EBP2	YKL172W	PRY2	P36110	329 aa		3.1	□□□□□ -1.91
EBP2	YKL172W	SLX1	P38324	304 aa		3.1	□□□□□ -1.91
EBP2	YKL172W	ASP1	P38986	381 aa	Predicted RBP	3.1	□□□□□ -1.91
EBP2	YKL172W	YIL059C	P40520	121 aa		3.1	□□□□□ -1.91
EBP2	YKL172W	ASG7	P46993	209 aa		3.1	□□□□□ -1.91
EBP2	YKL172W	ARP5	P53946	755 aa		3.1	□□□□□ -1.91
EBP2	YKL172W	SEC13	Q04491	297 aa	Known RBP	3.1	□□□□□ -1.91
EBP2	YKL172W	YLR446W	Q06204	433 aa		3.1	□□□□□ -1.91
EBP2	YKL172W	CUR1	Q06469	252 aa		3.1	□□□□□ -1.91
EBP2	YKL172W	APC9	Q12107	265 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 18 ms