RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W FIS1P40515 155 aa4.34□□□□□ -1.72
ABF1YKL112W YJR011CP47086 261 aaPredicted RBP4.34□□□□□ -1.72
ABF1YKL112W YNL260CP53846 198 aa4.34□□□□□ -1.72
ABF1YKL112W YPL113CQ02961 396 aa4.34□□□□□ -1.72
ABF1YKL112W PFA5Q03289 374 aa4.34□□□□□ -1.72
ABF1YKL112W RCR2Q03446 210 aaKnown RBP4.34□□□□□ -1.72
ABF1YKL112W RRP45Q05636 305 aaKnown RBP4.34□□□□□ -1.72
ABF1YKL112W HRD1Q08109 551 aa4.34□□□□□ -1.72
ABF1YKL112W GPB1Q08886 897 aa4.34□□□□□ -1.72
ABF1YKL112W ISU2Q12056 156 aa4.34□□□□□ -1.72
ABF1YKL112W COX4P04037 155 aa4.33□□□□□ -1.72
ABF1YKL112W RPS16AP0CX51 143 aaKnown RBP4.33□□□□□ -1.72
ABF1YKL112W RPS16BP0CX52 143 aaKnown RBP4.33□□□□□ -1.72
ABF1YKL112W IDP1P21954 428 aaKnown RBP4.33□□□□□ -1.72
ABF1YKL112W EXG1P23776 448 aaKnown RBP4.33□□□□□ -1.72
ABF1YKL112W PTC6P25646 442 aa4.33□□□□□ -1.72
ABF1YKL112W DGR2P32330 852 aa4.33□□□□□ -1.72
ABF1YKL112W CYS4P32582 507 aaKnown RBP4.33□□□□□ -1.72
ABF1YKL112W REC104P33323 182 aa4.33□□□□□ -1.72
ABF1YKL112W COS9P36034 407 aa4.33□□□□□ -1.72
ABF1YKL112W GOS1P38736 223 aa4.33□□□□□ -1.72
ABF1YKL112W RFC2P40348 353 aa4.33□□□□□ -1.72
ABF1YKL112W COA1P40452 197 aa4.33□□□□□ -1.72
ABF1YKL112W YIL108WP40483 696 aaKnown RBP4.33□□□□□ -1.72
ABF1YKL112W AIM22P47051 409 aa4.33□□□□□ -1.72
ABF1YKL112W BIR1P47134 954 aa4.33□□□□□ -1.72
ABF1YKL112W YNR062CP53748 327 aa4.33□□□□□ -1.72
ABF1YKL112W YNL184CP53876 108 aa4.33□□□□□ -1.72
ABF1YKL112W ASI2P53895 289 aa4.33□□□□□ -1.72
ABF1YKL112W TRS31Q03337 283 aa4.33□□□□□ -1.72
ABF1YKL112W YMR253CQ04835 414 aa4.33□□□□□ -1.72
ABF1YKL112W PEX30Q06169 523 aa4.33□□□□□ -1.72
ABF1YKL112W SCP1Q08873 200 aa4.33□□□□□ -1.72
ABF1YKL112W YLR046CQ12253 270 aa4.33□□□□□ -1.72
ABF1YKL112W RKM5Q12367 367 aa4.33□□□□□ -1.72
ABF1YKL112W YJR112W-AQ3E743 109 aa4.33□□□□□ -1.72
ABF1YKL112W TRA1P38811 3744 aa4.33□□□□□ -1.72
ABF1YKL112W SOD2P00447 233 aa4.33□□□□□ -1.72
ABF1YKL112W IMA3P0CW40 589 aa4.33□□□□□ -1.72
ABF1YKL112W IMA4P0CW41 589 aa4.33□□□□□ -1.72
ABF1YKL112W MTF1P14908 341 aaKnown RBP4.33□□□□□ -1.72
ABF1YKL112W PHO13P19881 312 aa4.33□□□□□ -1.72
ABF1YKL112W YMR31P19955 123 aa4.33□□□□□ -1.72
ABF1YKL112W SEC59P20048 519 aa4.33□□□□□ -1.72
ABF1YKL112W CLB2P24869 491 aa4.33□□□□□ -1.72
ABF1YKL112W ERG9P29704 444 aa4.33□□□□□ -1.72
ABF1YKL112W AEP1P32493 518 aa4.33□□□□□ -1.72
ABF1YKL112W SKG6P32900 734 aaPredicted RBP4.33□□□□□ -1.72
ABF1YKL112W YPT7P32939 208 aa4.33□□□□□ -1.72
ABF1YKL112W TRM2P33753 639 aa4.33□□□□□ -1.72
ABF1YKL112W EFM1P38732 585 aa4.33□□□□□ -1.72
ABF1YKL112W FSH1P38777 243 aaKnown RBP4.33□□□□□ -1.72
ABF1YKL112W TRM5P38793 499 aa4.33□□□□□ -1.72
ABF1YKL112W SKN7P38889 622 aa4.33□□□□□ -1.72
ABF1YKL112W VPS52P39904 641 aa4.33□□□□□ -1.72
ABF1YKL112W COX15P40086 486 aa4.33□□□□□ -1.72
ABF1YKL112W IST3P40565 148 aaPredicted RBP4.33□□□□□ -1.72
ABF1YKL112W IME4P41833 600 aa4.33□□□□□ -1.72
ABF1YKL112W YCH1P42937 148 aa4.33□□□□□ -1.72
ABF1YKL112W UBC9P50623 157 aaPredicted RBP4.33□□□□□ -1.72
ABF1YKL112W YGR079WP53249 370 aa4.33□□□□□ -1.72
ABF1YKL112W BOR1P53838 576 aa4.33□□□□□ -1.72
ABF1YKL112W YDR541CQ03049 344 aa4.33□□□□□ -1.72
ABF1YKL112W ACL4Q03771 387 aa4.33□□□□□ -1.72
ABF1YKL112W YDR132CQ03900 495 aa4.33□□□□□ -1.72
ABF1YKL112W AGE1Q04412 482 aa4.33□□□□□ -1.72
ABF1YKL112W HPF1Q05164 967 aa4.33□□□□□ -1.72
ABF1YKL112W IMA2Q08295 589 aa4.33□□□□□ -1.72
ABF1YKL112W YOR059CQ08448 450 aaKnown RBP4.33□□□□□ -1.72
ABF1YKL112W JLP1Q12358 412 aa4.33□□□□□ -1.72
ABF1YKL112W SPE4Q12455 300 aa4.33□□□□□ -1.72
ABF1YKL112W YPR015CQ12531 247 aa4.33□□□□□ -1.72
ABF1YKL112W SLO1Q3E784 85 aa4.33□□□□□ -1.72
ABF1YKL112W ADE4P04046 510 aaKnown RBP4.32□□□□□ -1.72
ABF1YKL112W RAD10P06838 210 aa4.32□□□□□ -1.72
ABF1YKL112W PDA1P16387 420 aaKnown RBP4.32□□□□□ -1.72
ABF1YKL112W STF2P16965 84 aa4.32□□□□□ -1.72
ABF1YKL112W NUP1P20676 1076 aa4.32□□□□□ -1.72
ABF1YKL112W PDE1P22434 369 aa4.32□□□□□ -1.72
ABF1YKL112W RPC25P35718 212 aa4.32□□□□□ -1.72
ABF1YKL112W PRS4P38063 326 aaPredicted RBP4.32□□□□□ -1.72
ABF1YKL112W MRPL16P38064 232 aa4.32□□□□□ -1.72
ABF1YKL112W YHR210CP38893 341 aa4.32□□□□□ -1.72
ABF1YKL112W SHU2P38957 223 aa4.32□□□□□ -1.72
ABF1YKL112W YAR028WP39548 234 aa4.32□□□□□ -1.72
ABF1YKL112W YGR210CP42942 411 aa4.32□□□□□ -1.72
ABF1YKL112W BST1P43571 1029 aa4.32□□□□□ -1.72
ABF1YKL112W LYS20P48570 428 aaKnown RBP4.32□□□□□ -1.72
ABF1YKL112W OCA2P53949 197 aa4.32□□□□□ -1.72
ABF1YKL112W SPP2Q02521 185 aa4.32□□□□□ -1.72
ABF1YKL112W STD1Q02794 444 aa4.32□□□□□ -1.72
ABF1YKL112W TRI1Q05024 226 aa4.32□□□□□ -1.72
ABF1YKL112W MRPL51Q06090 140 aaPredicted RBP4.32□□□□□ -1.72
ABF1YKL112W SRL2Q12020 392 aa4.32□□□□□ -1.72
ABF1YKL112W YIR021W-AQ3E739 70 aa4.32□□□□□ -1.72
ABF1YKL112W MES1P00958 751 aaKnown RBP4.31□□□□□ -1.72
ABF1YKL112W URA3P03962 267 aa4.31□□□□□ -1.72
ABF1YKL112W FPR1P20081 114 aaKnown RBP4.31□□□□□ -1.72
ABF1YKL112W MCK1P21965 375 aaKnown RBP4.31□□□□□ -1.72
ABF1YKL112W TRR1P29509 319 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 53.5 ms