RNA–Protein interactions for RNA: YJL099W

CHS6, Transcript of Member of the ChAPs (Chs5p-Arf1p-binding proteins) family, yeast

Gene CHS6, Length 2,241 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHS6	YJL099W	TIR4	Q12218	487 aa	Predicted RBP	0.61	□□□□□ -2.31
CHS6	YJL099W	PSY3	Q12318	242 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	YOR012W	Q12351	137 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	YIL002W-A	Q3E7Z5	69 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	YAL067W-A	Q8TGK6	75 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	BEM2	P39960	2167 aa	Known RBP	0.61	□□□□□ -2.31
CHS6	YJL099W	REP1	P03871	373 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	CBP2	P03874	630 aa	Predicted RBP	0.61	□□□□□ -2.31
CHS6	YJL099W	RPS14A	P06367	137 aa	Known RBP	0.61	□□□□□ -2.31
CHS6	YJL099W	VPS1	P21576	704 aa	Known RBP	0.61	□□□□□ -2.31
CHS6	YJL099W	INO2	P26798	304 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	MRPL6	P32904	214 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	AIM29	P36154	155 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	POP2	P39008	433 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	RPS14B	P39516	138 aa	Known RBP	0.61	□□□□□ -2.31
CHS6	YJL099W	BDH1	P39714	382 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	YIL059C	P40520	121 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	YIA6	P40556	373 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	INA22	P40576	216 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	PFS2	P42841	465 aa	Known RBP	0.61	□□□□□ -2.31
CHS6	YJL099W	SHE4	P51534	789 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	SDS23	P53172	527 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	CAX4	P53223	239 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	FMP48	P53233	369 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	VOA1	P53262	265 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	INP1	Q03694	420 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	UBX2	Q04228	584 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	YDR114C	Q04597	100 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	YPR195C	Q06594	109 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	YLR012C	Q07927	99 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	PML1	Q07930	204 aa	Predicted RBP	0.61	□□□□□ -2.31
CHS6	YJL099W	UTP23	Q12339	254 aa	Known RBP	0.61	□□□□□ -2.31
CHS6	YJL099W	RPN6	Q12377	434 aa		0.61	□□□□□ -2.31
CHS6	YJL099W	RAD7	P06779	565 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	RPL18A	P0CX49	186 aa	Known RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	RPL18B	P0CX50	186 aa	Known RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	TPM1	P17536	199 aa	Known RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	CPT1	P17898	393 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	MRPL20	P22354	195 aa	Predicted RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	RPL5	P26321	297 aa	Known RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	RPL16B	P26785	198 aa	Known RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	GCG1	P32656	232 aa	Known RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	BUD2	P33314	1104 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	ZRT3	P34240	503 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	MED8	P38304	223 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	SWC5	P38326	303 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	RCK1	P38622	512 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	ASP1	P38986	381 aa	Predicted RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	HEM14	P40012	539 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	EDC2	P40023	145 aa	Predicted RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	YCH1	P42937	148 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	YFL040W	P43562	540 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	PGU1	P47180	361 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	RSM27	P53305	110 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	YGR266W	P53326	701 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	ZRG17	P53735	605 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	SNX41	Q04053	625 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	YDR286C	Q05530	114 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	DIB1	Q06819	143 aa	Predicted RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	TRM10	Q12400	293 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	DCP1	Q12517	231 aa	Predicted RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	LAG2	Q92325	660 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	FLO11	P08640	1367 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	CAR2	P07991	424 aa	Known RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	MSS116	P15424	664 aa	Known RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	HPR1	P17629	752 aa	Known RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	YPS1	P32329	569 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	VPH2	P32341	215 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	SUR1	P33300	382 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	EBP2	P36049	427 aa	Known RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	SWD2	P36104	329 aa	Predicted RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	DBP7	P36120	742 aa	Known RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	FRM2	P37261	193 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	YGP1	P38616	354 aa	Known RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	YDR089W	P38966	869 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	KRE29	P40026	464 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	COG7	P53195	279 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	SMD1	Q02260	146 aa	Predicted RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	YPL080C	Q02826	108 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	SCS7	Q03529	384 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	CAB5	Q03941	241 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	VPS20	Q04272	221 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	BCP1	Q06338	283 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	GPN3	Q06543	272 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	YOR376W	Q08900	122 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	YPR063C	Q12160	140 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	YDR018C	Q12185	396 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	SIA1	Q12212	622 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	MDY2	Q12285	212 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	IES3	Q12345	250 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	DFM1	Q12743	341 aa	Known RBP	0.6	□□□□□ -2.31
CHS6	YJL099W	YOL085C	Q99345	113 aa		0.6	□□□□□ -2.31
CHS6	YJL099W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	0.59	□□□□□ -2.31	not detected
CHS6	YJL099W	SPS100	P13130	326 aa		0.59	□□□□□ -2.31
CHS6	YJL099W	COX10	P21592	462 aa		0.59	□□□□□ -2.31
CHS6	YJL099W	IME2	P32581	645 aa		0.59	□□□□□ -2.31
CHS6	YJL099W	CDC13	P32797	924 aa	Known RBP	0.59	□□□□□ -2.31
CHS6	YJL099W	CYM1	P32898	989 aa		0.59	□□□□□ -2.31
CHS6	YJL099W	RPC25	P35718	212 aa		0.59	□□□□□ -2.31
CHS6	YJL099W	ECM14	P38836	430 aa		0.59	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 16.4 ms