RNA–Protein interactions for RNA: YIL042C

PKP1, Transcript of Mitochondrial protein kinase, yeast

Gene PKP1, Length 1,185 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PKP1	YIL042C	YGL101W	P53144	215 aa		13.8	□□□□□ -0.2
PKP1	YIL042C	ERP6	P53198	216 aa		13.8	□□□□□ -0.2
PKP1	YIL042C	YHR214C-E	Q8TGK0	99 aa		13.8	□□□□□ -0.2
PKP1	YIL042C	FBA1	P14540	359 aa	Known RBP	13.79	□□□□□ -0.2
PKP1	YIL042C	SNF6	P18888	332 aa		13.79	□□□□□ -0.2
PKP1	YIL042C	GAS1	P22146	559 aa	Known RBP	13.79	□□□□□ -0.2
PKP1	YIL042C	PPG1	P32838	368 aa		13.79	□□□□□ -0.2
PKP1	YIL042C	NAS2	P40555	220 aa		13.79	□□□□□ -0.2
PKP1	YIL042C	MDJ2	P42834	146 aa		13.79	□□□□□ -0.2
PKP1	YIL042C	QRI7	P43122	407 aa		13.79	□□□□□ -0.2
PKP1	YIL042C	BRR6	P53062	197 aa		13.79	□□□□□ -0.2
PKP1	YIL042C	AGE1	Q04412	482 aa		13.79	□□□□□ -0.2
PKP1	YIL042C	YMR226C	Q05016	267 aa	Known RBP	13.79	□□□□□ -0.2
PKP1	YIL042C	MHF1	Q3E835	90 aa		13.79	□□□□□ -0.2
PKP1	YIL042C	RTC2	P38279	296 aa		13.78	□□□□□ -0.2
PKP1	YIL042C	THO1	P40040	218 aa	Known RBP	13.78	□□□□□ -0.2
PKP1	YIL042C	YMR144W	P40214	342 aa	Known RBP	13.78	□□□□□ -0.2
PKP1	YIL042C	POP1	P41812	875 aa		13.78	□□□□□ -0.2
PKP1	YIL042C	IDP2	P41939	412 aa		13.78	□□□□□ -0.2
PKP1	YIL042C	UIP4	Q08926	304 aa		13.78	□□□□□ -0.2
PKP1	YIL042C	HMS1	Q12398	434 aa		13.78	□□□□□ -0.2
PKP1	YIL042C	YDL007C-A	Q2V2Q0	85 aa		13.78	□□□□□ -0.2
PKP1	YIL042C	BUD5	P25300	642 aa	Predicted RBP	13.77	□□□□□ -0.21
PKP1	YIL042C	YCL042W	P25572	119 aa		13.77	□□□□□ -0.21
PKP1	YIL042C	CAM1	P29547	415 aa	Known RBP	13.77	□□□□□ -0.21
PKP1	YIL042C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	13.77	□□□□□ -0.21	not detected
PKP1	YIL042C	ZRG8	P40021	1076 aa		13.76	□□□□□ -0.21
PKP1	YIL042C	SNL1	P40548	159 aa		13.76	□□□□□ -0.21
PKP1	YIL042C	TFB3	Q03290	321 aa		13.76	□□□□□ -0.21
PKP1	YIL042C	ELP6	Q04868	273 aa		13.76	□□□□□ -0.21
PKP1	YIL042C	ATR1	P13090	542 aa		13.75	□□□□□ -0.21
PKP1	YIL042C	PPA2	P28239	310 aa		13.75	□□□□□ -0.21
PKP1	YIL042C	SLM4	P38247	162 aa		13.75	□□□□□ -0.21
PKP1	YIL042C	ISC1	P40015	477 aa	Known RBP	13.75	□□□□□ -0.21
PKP1	YIL042C	YIL165C	P40446	119 aa		13.75	□□□□□ -0.21
PKP1	YIL042C	AVT7	P40501	490 aa		13.75	□□□□□ -0.21
PKP1	YIL042C	MPH1	P40562	993 aa		13.75	□□□□□ -0.21
PKP1	YIL042C	MRP51	Q02950	344 aa		13.75	□□□□□ -0.21
PKP1	YIL042C	RSA3	Q05942	220 aa	Known RBP	13.75	□□□□□ -0.21
PKP1	YIL042C	SEC12	P11655	471 aa		13.74	□□□□□ -0.21
PKP1	YIL042C	RPC82	P32349	654 aa		13.74	□□□□□ -0.21
PKP1	YIL042C	SBE22	P38814	852 aa		13.74	□□□□□ -0.21
PKP1	YIL042C	HAS1	Q03532	505 aa	Known RBP	13.74	□□□□□ -0.21
PKP1	YIL042C	LOT6	Q07923	191 aa		13.74	□□□□□ -0.21
PKP1	YIL042C	NCE102	Q12207	173 aa	RIP-Chip data	13.74	□□□□□ -0.21	not detected
PKP1	YIL042C	EXG1	P23776	448 aa	Known RBP	13.73	□□□□□ -0.21
PKP1	YIL042C	APM1	Q00776	475 aa	Predicted RBP	13.73	□□□□□ -0.21
PKP1	YIL042C	YDR102C	Q03864	110 aa		13.73	□□□□□ -0.21
PKP1	YIL042C	YAP6	Q03935	383 aa		13.73	□□□□□ -0.21
PKP1	YIL042C	MIM1	Q08176	113 aa		13.73	□□□□□ -0.21
PKP1	YIL042C	MLH1	P38920	769 aa		13.72	□□□□□ -0.21
PKP1	YIL042C	RRG9	P40156	214 aa		13.72	□□□□□ -0.21
PKP1	YIL042C	ELA1	P53861	379 aa	Predicted RBP	13.72	□□□□□ -0.21
PKP1	YIL042C	YPL119C-A	Q3E751	87 aa		13.72	□□□□□ -0.21
PKP1	YIL042C	PRB1	P09232	635 aa		13.71	□□□□□ -0.21
PKP1	YIL042C	GIT1	P25346	518 aa		13.71	□□□□□ -0.21
PKP1	YIL042C	PEP12	P32854	288 aa		13.71	□□□□□ -0.21
PKP1	YIL042C	ECM8	P38246	354 aa		13.71	□□□□□ -0.21
PKP1	YIL042C	YER184C	P39961	794 aa		13.71	□□□□□ -0.21
PKP1	YIL042C	RRN9	P53437	365 aa		13.71	□□□□□ -0.21
PKP1	YIL042C	OST6	Q03723	332 aa		13.71	□□□□□ -0.21
PKP1	YIL042C	SMP3	Q04174	516 aa		13.71	□□□□□ -0.21
PKP1	YIL042C	CTS2	Q06350	511 aa		13.71	□□□□□ -0.21
PKP1	YIL042C	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	13.71	□□□□□ -0.21	not detected
PKP1	YIL042C	YOR289W	Q12012	251 aa	Predicted RBP	13.71	□□□□□ -0.21
PKP1	YIL042C	RPS20	P38701	121 aa	Known RBP	13.7	□□□□□ -0.22
PKP1	YIL042C	ARN2	P38724	620 aa		13.7	□□□□□ -0.22
PKP1	YIL042C	CHL4	P38907	458 aa		13.7	□□□□□ -0.22
PKP1	YIL042C	ACS2	P52910	683 aa	Known RBP	13.7	□□□□□ -0.22
PKP1	YIL042C	YMR099C	Q03161	297 aa	Known RBP	13.7	□□□□□ -0.22
PKP1	YIL042C	MED2	Q12124	431 aa		13.7	□□□□□ -0.22
PKP1	YIL042C	ITR1	P30605	584 aa		13.69	□□□□□ -0.22
PKP1	YIL042C	YRB2	P40517	327 aa		13.69	□□□□□ -0.22
PKP1	YIL042C	NIT3	P49954	291 aa		13.69	□□□□□ -0.22
PKP1	YIL042C	COG5	P53951	403 aa		13.69	□□□□□ -0.22
PKP1	YIL042C	RCE1	Q03530	315 aa		13.69	□□□□□ -0.22
PKP1	YIL042C	RVB1	Q03940	463 aa	Known RBP	13.69	□□□□□ -0.22
PKP1	YIL042C	BNA7	Q04066	261 aa		13.69	□□□□□ -0.22
PKP1	YIL042C	RTC5	Q12108	567 aa	Known RBP	13.69	□□□□□ -0.22
PKP1	YIL042C	TPK3	P05986	398 aa		13.68	□□□□□ -0.22
PKP1	YIL042C	PDA1	P16387	420 aa	Known RBP	13.68	□□□□□ -0.22
PKP1	YIL042C	SPO7	P18410	259 aa		13.68	□□□□□ -0.22
PKP1	YIL042C	MRPS5	P33759	307 aa		13.68	□□□□□ -0.22
PKP1	YIL042C	MIA40	P36046	403 aa		13.68	□□□□□ -0.22
PKP1	YIL042C	YER084W	P40057	128 aa		13.68	□□□□□ -0.22
PKP1	YIL042C	MOB2	P43563	287 aa		13.68	□□□□□ -0.22
PKP1	YIL042C	ILM1	P47155	203 aa		13.68	□□□□□ -0.22
PKP1	YIL042C	YNL165W	P53891	406 aa		13.68	□□□□□ -0.22
PKP1	YIL042C	RPL6A	Q02326	176 aa	Known RBP	13.68	□□□□□ -0.22
PKP1	YIL042C	SSY1	Q03770	852 aa		13.68	□□□□□ -0.22
PKP1	YIL042C	SPC19	Q03954	165 aa		13.68	□□□□□ -0.22
PKP1	YIL042C	TAF3	Q12297	353 aa		13.68	□□□□□ -0.22
PKP1	YIL042C	OPI3	P05375	206 aa		13.67	□□□□□ -0.22
PKP1	YIL042C	RPS16A	P0CX51	143 aa	Known RBP	13.67	□□□□□ -0.22
PKP1	YIL042C	RPS16B	P0CX52	143 aa	Known RBP	13.67	□□□□□ -0.22
PKP1	YIL042C	CNA1	P23287	553 aa		13.67	□□□□□ -0.22
PKP1	YIL042C	VPH2	P32341	215 aa		13.67	□□□□□ -0.22
PKP1	YIL042C	YBR063C	P38083	404 aa		13.67	□□□□□ -0.22
PKP1	YIL042C	GAT2	P40209	560 aa		13.67	□□□□□ -0.22
PKP1	YIL042C	ACS1	Q01574	713 aa		13.67	□□□□□ -0.22

Retrieved 100 of 5,963 RNA–protein pairs in 158.3 ms