RNA–Protein interactions for RNA: YDR392W

SPT3, Transcript of Subunit of the SAGA and SAGA-like transcriptional regulatory complexes, yeastyeast

Gene SPT3, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT3YDR392W YDL109CQ12103 647 aa3.72□□□□□ -1.81
SPT3YDR392W USB1Q12208 290 aaKnown RBP3.72□□□□□ -1.81
SPT3YDR392W YKL068W-AQ3E826 78 aa3.72□□□□□ -1.81
SPT3YDR392W YCR043CP25361 127 aa3.71□□□□□ -1.82
SPT3YDR392W TRX3P25372 127 aa3.71□□□□□ -1.82
SPT3YDR392W RPL5P26321 297 aaKnown RBP3.71□□□□□ -1.82
SPT3YDR392W SDH3P33421 198 aa3.71□□□□□ -1.82
SPT3YDR392W NUF2P33895 451 aa3.71□□□□□ -1.82
SPT3YDR392W KES1P35844 434 aaKnown RBP3.71□□□□□ -1.82
SPT3YDR392W EFM1P38732 585 aa3.71□□□□□ -1.82
SPT3YDR392W YFR035CP43608 114 aa3.71□□□□□ -1.82
SPT3YDR392W TAF6P53040 516 aa3.71□□□□□ -1.82
SPT3YDR392W KAP120Q02932 1032 aa3.71□□□□□ -1.82
SPT3YDR392W NGL1Q08213 363 aaKnown RBP3.71□□□□□ -1.82
SPT3YDR392W SGT1Q08446 395 aa3.71□□□□□ -1.82
SPT3YDR392W TY2A-LR1P0C2J4 438 aa3.7□□□□□ -1.82
SPT3YDR392W YML003WP0CF16 290 aa3.7□□□□□ -1.82
SPT3YDR392W COS2P0CX12 379 aa3.7□□□□□ -1.82
SPT3YDR392W COS3P0CX13 379 aa3.7□□□□□ -1.82
SPT3YDR392W TY2A-FP0CX61 438 aa3.7□□□□□ -1.82
SPT3YDR392W TY2A-GR2P0CX62 438 aa3.7□□□□□ -1.82
SPT3YDR392W MRPS28P21771 286 aa3.7□□□□□ -1.82
SPT3YDR392W TY2A-CP25383 438 aa3.7□□□□□ -1.82
SPT3YDR392W POL4P25615 582 aa3.7□□□□□ -1.82
SPT3YDR392W DPH5P32469 300 aaPredicted RBP3.7□□□□□ -1.82
SPT3YDR392W SMI1P32566 505 aa3.7□□□□□ -1.82
SPT3YDR392W YME2P32843 850 aa3.7□□□□□ -1.82
SPT3YDR392W SPT10P35208 640 aa3.7□□□□□ -1.82
SPT3YDR392W OLA1P38219 394 aaKnown RBP3.7□□□□□ -1.82
SPT3YDR392W CAJ1P39101 391 aa3.7□□□□□ -1.82
SPT3YDR392W EMP65P40085 556 aa3.7□□□□□ -1.82
SPT3YDR392W COS4P43542 379 aa3.7□□□□□ -1.82
SPT3YDR392W TY2A-DR2Q03483 438 aa3.7□□□□□ -1.82
SPT3YDR392W SNX41Q04053 625 aa3.7□□□□□ -1.82
SPT3YDR392W RRB1Q04225 511 aaKnown RBP3.7□□□□□ -1.82
SPT3YDR392W VMS1Q04311 632 aaKnown RBP3.7□□□□□ -1.82
SPT3YDR392W TMA16Q08687 178 aa3.7□□□□□ -1.82
SPT3YDR392W TY2A-BQ12260 438 aa3.7□□□□□ -1.82
SPT3YDR392W TY2A-OR2Q12293 438 aa3.7□□□□□ -1.82
SPT3YDR392W TY2A-DR1Q12392 438 aa3.7□□□□□ -1.82
SPT3YDR392W TY2A-OR1Q12439 438 aa3.7□□□□□ -1.82
SPT3YDR392W RMP1Q12530 201 aa3.7□□□□□ -1.82
SPT3YDR392W TY2A-DR3Q99303 438 aa3.7□□□□□ -1.82
SPT3YDR392W BAR1P12630 587 aa3.69□□□□□ -1.82
SPT3YDR392W HSC82P15108 705 aaKnown RBP3.69□□□□□ -1.82
SPT3YDR392W MCK1P21965 375 aaKnown RBP3.69□□□□□ -1.82
SPT3YDR392W LOS1P33418 1100 aaPredicted RBP3.69□□□□□ -1.82
SPT3YDR392W ADE17P38009 592 aaKnown RBP3.69□□□□□ -1.82
SPT3YDR392W RFT1P38206 574 aaPredicted RBP3.69□□□□□ -1.82
SPT3YDR392W ARC40P38328 384 aaKnown RBP3.69□□□□□ -1.82
SPT3YDR392W NSG1P38837 291 aa3.69□□□□□ -1.82
SPT3YDR392W DDI1P40087 428 aa3.69□□□□□ -1.82
SPT3YDR392W PFK26P40433 827 aaKnown RBP3.69□□□□□ -1.82
SPT3YDR392W MED2Q12124 431 aa3.69□□□□□ -1.82
SPT3YDR392W AAC3P18238 307 aa3.68□□□□□ -1.82
SPT3YDR392W TSC10P38342 320 aa3.68□□□□□ -1.82
SPT3YDR392W HYR1P40581 163 aaKnown RBP3.68□□□□□ -1.82
SPT3YDR392W MAD3P47074 515 aa3.68□□□□□ -1.82
SPT3YDR392W ILM1P47155 203 aa3.68□□□□□ -1.82
SPT3YDR392W CCC1P47818 322 aa3.68□□□□□ -1.82
SPT3YDR392W TIS11P47977 285 aa3.68□□□□□ -1.82
SPT3YDR392W APT1P49435 187 aaKnown RBP3.68□□□□□ -1.82
SPT3YDR392W PMT5P52867 743 aa3.68□□□□□ -1.82
SPT3YDR392W UFD1P53044 361 aa3.68□□□□□ -1.82
SPT3YDR392W LSG1P53145 640 aaKnown RBP3.68□□□□□ -1.82
SPT3YDR392W DSL1P53847 754 aa3.68□□□□□ -1.82
SPT3YDR392W MRP51Q02950 344 aa3.68□□□□□ -1.82
SPT3YDR392W HOT1Q03213 719 aa3.68□□□□□ -1.82
SPT3YDR392W COX20Q04935 205 aa3.68□□□□□ -1.82
SPT3YDR392W SSK1Q07084 712 aa3.68□□□□□ -1.82
SPT3YDR392W FIT3Q08907 204 aa3.68□□□□□ -1.82
SPT3YDR392W YHR212W-AP0CX91 67 aa3.67□□□□□ -1.82
SPT3YDR392W CLB4P24871 460 aa3.67□□□□□ -1.82
SPT3YDR392W RRP43P25359 394 aaPredicted RBP3.67□□□□□ -1.82
SPT3YDR392W SOF1P33750 489 aaKnown RBP3.67□□□□□ -1.82
SPT3YDR392W CTR2P38865 189 aa3.67□□□□□ -1.82
SPT3YDR392W YER034WP40022 185 aaKnown RBP3.67□□□□□ -1.82
SPT3YDR392W TFG2P41896 400 aaPredicted RBP3.67□□□□□ -1.82
SPT3YDR392W ERR3P42222 437 aa3.67□□□□□ -1.82
SPT3YDR392W GEP7P53171 287 aa3.67□□□□□ -1.82
SPT3YDR392W BTN2P53286 410 aa3.67□□□□□ -1.82
SPT3YDR392W WSC2P53832 503 aa3.67□□□□□ -1.82
SPT3YDR392W UME1Q03010 460 aa3.67□□□□□ -1.82
SPT3YDR392W MTG1Q03151 367 aaPredicted RBP3.67□□□□□ -1.82
SPT3YDR392W TLG1Q03322 224 aa3.67□□□□□ -1.82
SPT3YDR392W RAD34Q06665 692 aa3.67□□□□□ -1.82
SPT3YDR392W SLD7Q08457 257 aa3.67□□□□□ -1.82
SPT3YDR392W RTC5Q12108 567 aaKnown RBP3.67□□□□□ -1.82
SPT3YDR392W YPL245WQ12179 454 aaKnown RBP3.67□□□□□ -1.82
SPT3YDR392W NKP1Q12493 238 aa3.67□□□□□ -1.82
SPT3YDR392W RAS2P01120 322 aaKnown RBP3.66□□□□□ -1.82
SPT3YDR392W CNA1P23287 553 aa3.66□□□□□ -1.82
SPT3YDR392W IES6P32617 166 aa3.66□□□□□ -1.82
SPT3YDR392W TOA1P32773 286 aa3.66□□□□□ -1.82
SPT3YDR392W CHK1P38147 527 aa3.66□□□□□ -1.82
SPT3YDR392W SMF2P38778 549 aa3.66□□□□□ -1.82
SPT3YDR392W SEC9P40357 651 aa3.66□□□□□ -1.82
SPT3YDR392W BNA1P47096 177 aa3.66□□□□□ -1.82
SPT3YDR392W SUB1P54000 292 aaKnown RBP3.66□□□□□ -1.82
SPT3YDR392W REX2P54964 269 aaKnown RBP3.66□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 24.6 ms