RNA–Protein interactions for RNA: YDR170C

SEC7, Transcript of Guanine nucleotide exchange factor (GEF) for ADP ribosylation factors, yeast

Gene SEC7, Length 6,030 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC7	YDR170C	GCS1	P35197	352 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	AUR1	P36107	401 aa	Predicted RBP	2.6	□□□□□ -1.99
SEC7	YDR170C	FIG1	P38224	298 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	CCZ1	P38273	704 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	IFA38	P38286	347 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	PRS2	P38620	318 aa	Known RBP	2.6	□□□□□ -1.99
SEC7	YDR170C	RAD55	P38953	406 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	YJR011C	P47086	261 aa	Predicted RBP	2.6	□□□□□ -1.99
SEC7	YDR170C	PHO23	P50947	330 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	BUD9	P53226	547 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	LSC1	P53598	329 aa	Known RBP	2.6	□□□□□ -1.99
SEC7	YDR170C	CTL1	Q03220	320 aa	Known RBP	2.6	□□□□□ -1.99
SEC7	YDR170C	YLR413W	Q06689	675 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	SDO1	Q07953	250 aa	Known RBP	2.6	□□□□□ -1.99
SEC7	YDR170C	NDJ1	Q12366	352 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	MHT1	Q12525	324 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	KRE6	P32486	720 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	SRB5	P32585	307 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	HIS7	P33734	552 aa	Known RBP	2.6	□□□□□ -1.99
SEC7	YDR170C	ASH1	P34233	588 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	APL3	P38065	1025 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	ERT1	P38140	529 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	SSH1	P38353	490 aa	Known RBP	2.6	□□□□□ -1.99
SEC7	YDR170C	TIS11	P47977	285 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	NBP35	P52920	328 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	ADD37	Q03233	198 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	DLT1	Q04216	342 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	SNO4	Q04902	237 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	TAZ1	Q06510	381 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	OPI10	Q08202	246 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	HSP33	Q08914	237 aa	Known RBP	2.6	□□□□□ -1.99
SEC7	YDR170C	HSP32	Q08992	237 aa		2.6	□□□□□ -1.99
SEC7	YDR170C	CDC7	P06243	507 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	KGD1	P20967	1014 aa	Known RBP	2.59	□□□□□ -1.99
SEC7	YDR170C	GPI12	P23797	304 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	YGL010W	P25338	174 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	ERG4	P25340	473 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	YCR100C	P25606	316 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	PRE2	P30656	287 aa	Known RBP	2.59	□□□□□ -1.99
SEC7	YDR170C	TYE7	P33122	291 aa	Predicted RBP	2.59	□□□□□ -1.99
SEC7	YDR170C	CHK1	P38147	527 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	FMP23	P38231	175 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	SPO73	P40031	143 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	APQ12	P40532	138 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	HMS2	P47175	358 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	MUP1	P50276	574 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	YGL117W	P53133	265 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	IMO32	P53219	342 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	YDR366C	P87287	132 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	GAL83	Q04739	417 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	COX20	Q04935	205 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	RRP42	Q12277	265 aa	Predicted RBP	2.59	□□□□□ -1.99
SEC7	YDR170C	PST1	Q12355	444 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	TRM1	P15565	570 aa	Known RBP	2.59	□□□□□ -1.99
SEC7	YDR170C	YHR210C	P38893	341 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	PEF1	P53238	335 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	SNO1	Q03144	224 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	YMR090W	Q04304	227 aa	Known RBP	2.59	□□□□□ -1.99
SEC7	YDR170C	RRP40	Q08285	240 aa	Known RBP	2.59	□□□□□ -1.99
SEC7	YDR170C	ATP6	P00854	259 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	PHO2	P07269	559 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	YLL053C	P0CD98	152 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	URA5	P13298	226 aa	Known RBP	2.59	□□□□□ -1.99
SEC7	YDR170C	RPB3	P16370	318 aa	Known RBP	2.59	□□□□□ -1.99
SEC7	YDR170C	MRPL4	P36517	319 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	VBA2	P38358	474 aa	Known RBP	2.59	□□□□□ -1.99
SEC7	YDR170C	GOS1	P38736	223 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	PFS2	P42841	465 aa	Known RBP	2.59	□□□□□ -1.99
SEC7	YDR170C	YGL159W	P53110	370 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	NSA1	P53136	463 aa	Predicted RBP	2.59	□□□□□ -1.99
SEC7	YDR170C	YPR003C	P53394	754 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	SAE3	P89114	91 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	CSR2	Q12734	1121 aa		2.59	□□□□□ -1.99
SEC7	YDR170C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	2.59	□□□□□ -2	not detected
SEC7	YDR170C	CWH43	P25618	953 aa		2.59	□□□□□ -2
SEC7	YDR170C	SPT14	P32363	452 aa		2.59	□□□□□ -2
SEC7	YDR170C	GMH1	P36125	273 aa		2.59	□□□□□ -2
SEC7	YDR170C	AIM29	P36154	155 aa		2.59	□□□□□ -2
SEC7	YDR170C	LSM4	P40070	187 aa	Known RBP	2.59	□□□□□ -2
SEC7	YDR170C	HSV2	P50079	448 aa	Predicted RBP	2.59	□□□□□ -2
SEC7	YDR170C	YNR062C	P53748	327 aa		2.59	□□□□□ -2
SEC7	YDR170C	RHO4	Q00246	291 aa		2.59	□□□□□ -2
SEC7	YDR170C	SPR6	Q01684	191 aa		2.59	□□□□□ -2
SEC7	YDR170C	AAT1	Q01802	451 aa		2.59	□□□□□ -2
SEC7	YDR170C	ECM7	Q06200	448 aa		2.59	□□□□□ -2
SEC7	YDR170C	YOL036W	Q08206	761 aa		2.59	□□□□□ -2
SEC7	YDR170C	TPO4	Q12256	659 aa		2.59	□□□□□ -2
SEC7	YDR170C	NPC2	Q12408	173 aa		2.59	□□□□□ -2
SEC7	YDR170C	TFC7	Q12415	435 aa		2.59	□□□□□ -2
SEC7	YDR170C	PRP46	Q12417	451 aa	Predicted RBP	2.59	□□□□□ -2
SEC7	YDR170C	RPS13	P05756	151 aa	Known RBP	2.59	□□□□□ -2
SEC7	YDR170C	MGR1	P25573	417 aa		2.59	□□□□□ -2
SEC7	YDR170C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	2.59	□□□□□ -2	not detected
SEC7	YDR170C	SFC1	P33303	322 aa		2.59	□□□□□ -2
SEC7	YDR170C	UPS2	P35200	230 aa		2.59	□□□□□ -2
SEC7	YDR170C	PAU24	P38155	120 aa		2.59	□□□□□ -2
SEC7	YDR170C	GTT1	P40582	234 aa		2.59	□□□□□ -2
SEC7	YDR170C	SNG1	P46950	547 aa		2.59	□□□□□ -2
SEC7	YDR170C	BIO5	P53744	561 aa	Known RBP	2.59	□□□□□ -2
SEC7	YDR170C	ACS1	Q01574	713 aa		2.59	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 51.8 ms