RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C ZRT3P34240 503 aa3.09□□□□□ -1.91
RRI1YDL216C COS4P43542 379 aa3.09□□□□□ -1.91
RRI1YDL216C CPR7P47103 393 aa3.09□□□□□ -1.91
RRI1YDL216C SMD1Q02260 146 aaPredicted RBP3.09□□□□□ -1.91
RRI1YDL216C YMR244WQ04018 355 aa3.09□□□□□ -1.91
RRI1YDL216C UBX2Q04228 584 aa3.09□□□□□ -1.91
RRI1YDL216C YPL245WQ12179 454 aaKnown RBP3.09□□□□□ -1.91
RRI1YDL216C CDC37P06101 506 aaKnown RBP3.08□□□□□ -1.92
RRI1YDL216C RPL18AP0CX49 186 aaKnown RBP3.08□□□□□ -1.92
RRI1YDL216C RPL18BP0CX50 186 aaKnown RBP3.08□□□□□ -1.92
RRI1YDL216C CPT1P17898 393 aa3.08□□□□□ -1.92
RRI1YDL216C TRX1P22217 103 aaKnown RBP3.08□□□□□ -1.92
RRI1YDL216C YMR262WP38430 313 aa3.08□□□□□ -1.92
RRI1YDL216C UTP25P40498 721 aaKnown RBP3.08□□□□□ -1.92
RRI1YDL216C INA22P40576 216 aa3.08□□□□□ -1.92
RRI1YDL216C STE23Q06010 1027 aa3.08□□□□□ -1.92
RRI1YDL216C ECM19Q06011 112 aa3.08□□□□□ -1.92
RRI1YDL216C BI3Q9ZZW7 517 aa3.08□□□□□ -1.92
RRI1YDL216C SPS100P13130 326 aa3.07□□□□□ -1.92
RRI1YDL216C AGA2P32781 87 aa3.07□□□□□ -1.92
RRI1YDL216C SLM1P40485 686 aa3.07□□□□□ -1.92
RRI1YDL216C IRC4Q03036 179 aa3.07□□□□□ -1.92
RRI1YDL216C TRM10Q12400 293 aa3.07□□□□□ -1.92
RRI1YDL216C YPS1P32329 569 aa3.06□□□□□ -1.92
RRI1YDL216C IME2P32581 645 aa3.06□□□□□ -1.92
RRI1YDL216C YHR035WP38769 630 aa3.06□□□□□ -1.92
RRI1YDL216C DSE1P40077 573 aa3.06□□□□□ -1.92
RRI1YDL216C YIL059CP40520 121 aa3.06□□□□□ -1.92
RRI1YDL216C MIM1Q08176 113 aa3.06□□□□□ -1.92
RRI1YDL216C KOG1P38873 1557 aa3.05□□□□□ -1.92
RRI1YDL216C ERD1P16151 362 aa3.05□□□□□ -1.92
RRI1YDL216C MRPL20P22354 195 aaPredicted RBP3.05□□□□□ -1.92
RRI1YDL216C PET18P25362 215 aa3.05□□□□□ -1.92
RRI1YDL216C SSO2P39926 295 aa3.05□□□□□ -1.92
RRI1YDL216C YGL118CP53132 145 aa3.05□□□□□ -1.92
RRI1YDL216C VPS20Q04272 221 aa3.05□□□□□ -1.92
RRI1YDL216C RFM1Q12192 310 aa3.05□□□□□ -1.92
RRI1YDL216C TFC7Q12415 435 aa3.05□□□□□ -1.92
RRI1YDL216C MSS116P15424 664 aaKnown RBP3.04□□□□□ -1.92
RRI1YDL216C KRR1P25586 316 aaPredicted RBP3.04□□□□□ -1.92
RRI1YDL216C RPB9P27999 122 aa3.04□□□□□ -1.92
RRI1YDL216C END3P39013 349 aa3.04□□□□□ -1.92
RRI1YDL216C YFL040WP43562 540 aa3.04□□□□□ -1.92
RRI1YDL216C ASG7P46993 209 aa3.04□□□□□ -1.92
RRI1YDL216C CAX4P53223 239 aa3.04□□□□□ -1.92
RRI1YDL216C YNR066CP53752 436 aa3.04□□□□□ -1.92
RRI1YDL216C CAB5Q03941 241 aa3.04□□□□□ -1.92
RRI1YDL216C YLR297WQ05899 129 aa3.04□□□□□ -1.92
RRI1YDL216C VIK1Q12045 647 aa3.04□□□□□ -1.92
RRI1YDL216C INO2P26798 304 aa3.03□□□□□ -1.92
RRI1YDL216C ZRT1P32804 376 aa3.03□□□□□ -1.92
RRI1YDL216C SOP4P39543 234 aaPredicted RBP3.03□□□□□ -1.92
RRI1YDL216C AIM20P40451 204 aa3.03□□□□□ -1.92
RRI1YDL216C OKP1P53298 406 aa3.03□□□□□ -1.92
RRI1YDL216C YPL080CQ02826 108 aa3.03□□□□□ -1.92
RRI1YDL216C SNX41Q04053 625 aa3.03□□□□□ -1.92
RRI1YDL216C UTP23Q12339 254 aaKnown RBP3.03□□□□□ -1.92
RRI1YDL216C PRP46Q12417 451 aaPredicted RBP3.03□□□□□ -1.92
RRI1YDL216C SPA2P23201 1466 aaKnown RBP3.03□□□□□ -1.92
RRI1YDL216C PET8P38921 284 aa3.02□□□□□ -1.93
RRI1YDL216C ASP1P38986 381 aaPredicted RBP3.02□□□□□ -1.93
RRI1YDL216C SPO73P40031 143 aa3.02□□□□□ -1.93
RRI1YDL216C SAM4Q08985 325 aaKnown RBP3.02□□□□□ -1.93
RRI1YDL216C RTC5Q12108 567 aaKnown RBP3.02□□□□□ -1.93
RRI1YDL216C CBP2P03874 630 aaPredicted RBP3.01□□□□□ -1.93
RRI1YDL216C VPH2P32341 215 aa3.01□□□□□ -1.93
RRI1YDL216C SUR1P33300 382 aa3.01□□□□□ -1.93
RRI1YDL216C CSE1P33307 960 aa3.01□□□□□ -1.93
RRI1YDL216C YKL162CP36052 402 aa3.01□□□□□ -1.93
RRI1YDL216C SWC5P38326 303 aa3.01□□□□□ -1.93
RRI1YDL216C RPN14P53196 417 aa3.01□□□□□ -1.93
RRI1YDL216C PRO2P54885 456 aaKnown RBP3.01□□□□□ -1.93
RRI1YDL216C ERP3Q12403 225 aa3.01□□□□□ -1.93
RRI1YDL216C YPR1Q12458 312 aa3.01□□□□□ -1.93
RRI1YDL216C HPR1P17629 752 aaKnown RBP3□□□□□ -1.93
RRI1YDL216C IFM1P25038 676 aa3□□□□□ -1.93
RRI1YDL216C YDR089WP38966 869 aa3□□□□□ -1.93
RRI1YDL216C EDC2P40023 145 aaPredicted RBP3□□□□□ -1.93
RRI1YDL216C CSI1Q04368 295 aa3□□□□□ -1.93
RRI1YDL216C PAA1Q12447 191 aaKnown RBP3□□□□□ -1.93
RRI1YDL216C LAG2Q92325 660 aa3□□□□□ -1.93
RRI1YDL216C SWR1Q05471 1514 aa3□□□□□ -1.93
RRI1YDL216C TDH3P00359 332 aaKnown RBP RIP-Chip data2.99□□□□□ -1.93not detected
RRI1YDL216C STF1P01098 86 aa2.99□□□□□ -1.93
RRI1YDL216C MCH2P36032 473 aa2.99□□□□□ -1.93
RRI1YDL216C AIM29P36154 155 aa2.99□□□□□ -1.93
RRI1YDL216C FET3P38993 636 aa2.99□□□□□ -1.93
RRI1YDL216C PES4P39684 611 aa2.99□□□□□ -1.93
RRI1YDL216C LOH1P47055 219 aa2.99□□□□□ -1.93
RRI1YDL216C YGR266WP53326 701 aa2.99□□□□□ -1.93
RRI1YDL216C SEC13Q04491 297 aaKnown RBP2.99□□□□□ -1.93
RRI1YDL216C YLR446WQ06204 433 aa2.99□□□□□ -1.93
RRI1YDL216C YOR292CQ08743 309 aa2.99□□□□□ -1.93
RRI1YDL216C YPL264CQ08980 353 aa2.99□□□□□ -1.93
RRI1YDL216C DCP1Q12517 231 aaPredicted RBP2.99□□□□□ -1.93
RRI1YDL216C IZH4Q99393 312 aa2.99□□□□□ -1.93
RRI1YDL216C YPR096CO13587 100 aa2.98□□□□□ -1.93
RRI1YDL216C GCD2P12754 651 aaPredicted RBP2.98□□□□□ -1.93
RRI1YDL216C MED8P38304 223 aa2.98□□□□□ -1.93
RRI1YDL216C ECM14P38836 430 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms