RNA–Protein interactions for RNA: YDL130W

RPP1B, Transcript of Ribosomal protein P1 beta, yeast

Gene RPP1B, Length 321 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPP1B	YDL130W	SOF1	P33750	489 aa	Known RBP	13.83	□□□□□ -0.2
RPP1B	YDL130W	MRPL16	P38064	232 aa		13.83	□□□□□ -0.2
RPP1B	YDL130W	RRG9	P40156	214 aa		13.83	□□□□□ -0.2
RPP1B	YDL130W	STB1	P42845	420 aa		13.83	□□□□□ -0.2
RPP1B	YDL130W	VMA10	P48836	114 aa	Known RBP	13.83	□□□□□ -0.2
RPP1B	YDL130W	SAM37	P50110	327 aa		13.83	□□□□□ -0.2
RPP1B	YDL130W	MEU1	Q07938	337 aa	Known RBP RIP-Chip data	13.83	□□□□□ -0.2	not detected
RPP1B	YDL130W	THI4	P32318	326 aa		13.82	□□□□□ -0.2
RPP1B	YDL130W	PAD1	P33751	242 aa	Known RBP RIP-Chip data	13.82	□□□□□ -0.2	not detected
RPP1B	YDL130W	NAS2	P40555	220 aa		13.82	□□□□□ -0.2
RPP1B	YDL130W	TPK3	P05986	398 aa		13.81	□□□□□ -0.2
RPP1B	YDL130W	RPC82	P32349	654 aa		13.81	□□□□□ -0.2
RPP1B	YDL130W	CYS4	P32582	507 aa	Known RBP	13.81	□□□□□ -0.2
RPP1B	YDL130W	MTC6	P38849	526 aa		13.81	□□□□□ -0.2
RPP1B	YDL130W	SEN34	P39707	275 aa		13.81	□□□□□ -0.2
RPP1B	YDL130W	SMP3	Q04174	516 aa		13.81	□□□□□ -0.2
RPP1B	YDL130W	YPR097W	Q06839	1073 aa		13.81	□□□□□ -0.2
RPP1B	YDL130W	DBP10	Q12389	995 aa	Known RBP	13.81	□□□□□ -0.2
RPP1B	YDL130W	GAS1	P22146	559 aa	Known RBP	13.8	□□□□□ -0.2
RPP1B	YDL130W	ECM8	P38246	354 aa		13.8	□□□□□ -0.2
RPP1B	YDL130W	YBR138C	P38277	524 aa		13.8	□□□□□ -0.2
RPP1B	YDL130W	MRPL19	P53875	158 aa		13.8	□□□□□ -0.2
RPP1B	YDL130W	COG5	P53951	403 aa		13.8	□□□□□ -0.2
RPP1B	YDL130W	ELP6	Q04868	273 aa		13.8	□□□□□ -0.2
RPP1B	YDL130W	HMS1	Q12398	434 aa		13.8	□□□□□ -0.2
RPP1B	YDL130W	YHR214C-E	Q8TGK0	99 aa		13.8	□□□□□ -0.2
RPP1B	YDL130W	AIM3	P38266	947 aa	Known RBP	13.79	□□□□□ -0.2
RPP1B	YDL130W	CHL4	P38907	458 aa		13.79	□□□□□ -0.2
RPP1B	YDL130W	ISC1	P40015	477 aa	Known RBP	13.79	□□□□□ -0.2
RPP1B	YDL130W	GPP1	P41277	250 aa	Known RBP	13.79	□□□□□ -0.2
RPP1B	YDL130W	QRI7	P43122	407 aa		13.79	□□□□□ -0.2
RPP1B	YDL130W	SWP82	P43554	623 aa		13.79	□□□□□ -0.2
RPP1B	YDL130W	RRN9	P53437	365 aa		13.79	□□□□□ -0.2
RPP1B	YDL130W	SEC12	P11655	471 aa		13.78	□□□□□ -0.2
RPP1B	YDL130W	CAM1	P29547	415 aa	Known RBP	13.78	□□□□□ -0.2
RPP1B	YDL130W	MLH1	P38920	769 aa		13.78	□□□□□ -0.2
RPP1B	YDL130W	IDP2	P41939	412 aa		13.78	□□□□□ -0.2
RPP1B	YDL130W	ELA1	P53861	379 aa	Predicted RBP	13.78	□□□□□ -0.2
RPP1B	YDL130W	MRP51	Q02950	344 aa		13.78	□□□□□ -0.2
RPP1B	YDL130W	RVB1	Q03940	463 aa	Known RBP	13.78	□□□□□ -0.2
RPP1B	YDL130W	RSM24	Q03976	319 aa		13.78	□□□□□ -0.2
RPP1B	YDL130W	MED2	Q12124	431 aa		13.78	□□□□□ -0.2
RPP1B	YDL130W	SAM35	P14693	329 aa		13.77	□□□□□ -0.21
RPP1B	YDL130W	FAR1	P21268	830 aa		13.77	□□□□□ -0.21
RPP1B	YDL130W	ARN2	P38724	620 aa		13.77	□□□□□ -0.21
RPP1B	YDL130W	YTA6	P40328	754 aa		13.77	□□□□□ -0.21
RPP1B	YDL130W	NUP116	Q02630	1113 aa		13.77	□□□□□ -0.21
RPP1B	YDL130W	YMR099C	Q03161	297 aa	Known RBP	13.77	□□□□□ -0.21
RPP1B	YDL130W	YMD8	Q03697	442 aa		13.77	□□□□□ -0.21
RPP1B	YDL130W	CTS2	Q06350	511 aa		13.77	□□□□□ -0.21
RPP1B	YDL130W	MLC2	Q06580	163 aa		13.77	□□□□□ -0.21
RPP1B	YDL130W	PRB1	P09232	635 aa		13.76	□□□□□ -0.21
RPP1B	YDL130W	SPO7	P18410	259 aa		13.76	□□□□□ -0.21
RPP1B	YDL130W	RPI1	P23250	407 aa	Known RBP	13.76	□□□□□ -0.21
RPP1B	YDL130W	PPA2	P28239	310 aa		13.76	□□□□□ -0.21
RPP1B	YDL130W	YER184C	P39961	794 aa		13.76	□□□□□ -0.21
RPP1B	YDL130W	MPH1	P40562	993 aa		13.76	□□□□□ -0.21
RPP1B	YDL130W	SSY5	P47002	699 aa		13.76	□□□□□ -0.21
RPP1B	YDL130W	HOT1	Q03213	719 aa		13.76	□□□□□ -0.21
RPP1B	YDL130W	OST6	Q03723	332 aa		13.76	□□□□□ -0.21
RPP1B	YDL130W	YDR102C	Q03864	110 aa		13.76	□□□□□ -0.21
RPP1B	YDL130W	SPC19	Q03954	165 aa		13.76	□□□□□ -0.21
RPP1B	YDL130W	AGE1	Q04412	482 aa		13.76	□□□□□ -0.21
RPP1B	YDL130W	YPQ2	Q06328	317 aa		13.76	□□□□□ -0.21
RPP1B	YDL130W	MIM1	Q08176	113 aa		13.76	□□□□□ -0.21
RPP1B	YDL130W	RTC5	Q12108	567 aa	Known RBP	13.76	□□□□□ -0.21
RPP1B	YDL130W	GIT1	P25346	518 aa		13.75	□□□□□ -0.21
RPP1B	YDL130W	PCP1	P53259	346 aa		13.75	□□□□□ -0.21
RPP1B	YDL130W	OAC1	P32332	324 aa		13.74	□□□□□ -0.21
RPP1B	YDL130W	VBA2	P38358	474 aa	Known RBP	13.74	□□□□□ -0.21
RPP1B	YDL130W	DPB11	P47027	764 aa	Predicted RBP	13.74	□□□□□ -0.21
RPP1B	YDL130W	PGA1	P53896	198 aa		13.74	□□□□□ -0.21
RPP1B	YDL130W	APM1	Q00776	475 aa	Predicted RBP	13.74	□□□□□ -0.21
RPP1B	YDL130W	BNA7	Q04066	261 aa		13.74	□□□□□ -0.21
RPP1B	YDL130W	YPL119C-A	Q3E751	87 aa		13.74	□□□□□ -0.21
RPP1B	YDL130W	NFT1	P0CE68	1218 aa		13.73	□□□□□ -0.21
RPP1B	YDL130W	SPS100	P13130	326 aa		13.73	□□□□□ -0.21
RPP1B	YDL130W	EXG1	P23776	448 aa	Known RBP	13.73	□□□□□ -0.21
RPP1B	YDL130W	YHL037C	P38733	133 aa		13.73	□□□□□ -0.21
RPP1B	YDL130W	YMR144W	P40214	342 aa	Known RBP	13.73	□□□□□ -0.21
RPP1B	YDL130W	SNZ1	Q03148	297 aa		13.73	□□□□□ -0.21
RPP1B	YDL130W	YAP6	Q03935	383 aa		13.73	□□□□□ -0.21
RPP1B	YDL130W	YOR289W	Q12012	251 aa	Predicted RBP	13.73	□□□□□ -0.21
RPP1B	YDL130W	SSE2	P32590	693 aa	Known RBP	13.72	□□□□□ -0.21
RPP1B	YDL130W	ZRG8	P40021	1076 aa		13.72	□□□□□ -0.21
RPP1B	YDL130W	ACS2	P52910	683 aa	Known RBP	13.72	□□□□□ -0.21
RPP1B	YDL130W	COS10	P52924	374 aa		13.72	□□□□□ -0.21
RPP1B	YDL130W	SSY1	Q03770	852 aa		13.72	□□□□□ -0.21
RPP1B	YDL130W	SIA1	Q12212	622 aa		13.72	□□□□□ -0.21
RPP1B	YDL130W	PHO80	P20052	293 aa		13.71	□□□□□ -0.21
RPP1B	YDL130W	CPR2	P23285	205 aa		13.71	□□□□□ -0.21
RPP1B	YDL130W	VPH2	P32341	215 aa		13.71	□□□□□ -0.21
RPP1B	YDL130W	YGP1	P38616	354 aa	Known RBP	13.71	□□□□□ -0.21
RPP1B	YDL130W	TAZ1	Q06510	381 aa		13.71	□□□□□ -0.21
RPP1B	YDL130W	YDL114W	Q07530	308 aa		13.71	□□□□□ -0.21
RPP1B	YDL130W	LSO1	Q3E827	93 aa		13.71	□□□□□ -0.21
RPP1B	YDL130W	URE2	P23202	354 aa	Known RBP	13.7	□□□□□ -0.22
RPP1B	YDL130W	MAL32	P38158	584 aa		13.7	□□□□□ -0.22
RPP1B	YDL130W	AMN1	P38285	549 aa	Predicted RBP	13.7	□□□□□ -0.22
RPP1B	YDL130W	PHO90	P39535	881 aa		13.7	□□□□□ -0.22

Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms