RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene RXT3, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RXT3YDL076C KRE6P32486 720 aa3.95□□□□□ -1.78
RXT3YDL076C SSE1P32589 693 aaKnown RBP3.95□□□□□ -1.78
RXT3YDL076C YEF1P32622 495 aa3.95□□□□□ -1.78
RXT3YDL076C AIM2P39721 246 aa3.95□□□□□ -1.78
RXT3YDL076C YMR144WP40214 342 aaKnown RBP3.95□□□□□ -1.78
RXT3YDL076C JEM1P40358 645 aa3.95□□□□□ -1.78
RXT3YDL076C AYR1P40471 297 aa3.95□□□□□ -1.78
RXT3YDL076C REE1P40893 198 aa3.95□□□□□ -1.78
RXT3YDL076C TAF6P53040 516 aa3.95□□□□□ -1.78
RXT3YDL076C LGE1Q02796 332 aaKnown RBP3.95□□□□□ -1.78
RXT3YDL076C DPB4Q04603 196 aaKnown RBP3.95□□□□□ -1.78
RXT3YDL076C FAR8Q05040 523 aa3.95□□□□□ -1.78
RXT3YDL076C BUR2Q05949 395 aa3.95□□□□□ -1.78
RXT3YDL076C GAS2Q06135 555 aa3.95□□□□□ -1.78
RXT3YDL076C LUC7Q07508 261 aaPredicted RBP3.95□□□□□ -1.78
RXT3YDL076C YRM1Q12340 786 aa3.95□□□□□ -1.78
RXT3YDL076C SPO24Q3E752 67 aa3.95□□□□□ -1.78
RXT3YDL076C UTP20P35194 2493 aaKnown RBP3.94□□□□□ -1.78
RXT3YDL076C ZWF1P11412 505 aaKnown RBP3.94□□□□□ -1.78
RXT3YDL076C GAL3P13045 520 aa3.94□□□□□ -1.78
RXT3YDL076C YIM1P28625 365 aa3.94□□□□□ -1.78
RXT3YDL076C PTR2P32901 601 aa3.94□□□□□ -1.78
RXT3YDL076C RSM22P36056 628 aa3.94□□□□□ -1.78
RXT3YDL076C PRS3P38689 320 aaKnown RBP3.94□□□□□ -1.78
RXT3YDL076C ARN1P38731 627 aa3.94□□□□□ -1.78
RXT3YDL076C AST2P39945 430 aaKnown RBP3.94□□□□□ -1.78
RXT3YDL076C ALG5P40350 334 aa3.94□□□□□ -1.78
RXT3YDL076C MET28P40573 187 aa3.94□□□□□ -1.78
RXT3YDL076C RPE1P46969 238 aa3.94□□□□□ -1.78
RXT3YDL076C MRM2P53123 320 aa3.94□□□□□ -1.78
RXT3YDL076C LSG1P53145 640 aaKnown RBP3.94□□□□□ -1.78
RXT3YDL076C MAL12P53341 584 aa3.94□□□□□ -1.78
RXT3YDL076C REX2P54964 269 aaKnown RBP3.94□□□□□ -1.78
RXT3YDL076C SWP1Q02795 286 aa3.94□□□□□ -1.78
RXT3YDL076C MMT1Q03218 510 aa3.94□□□□□ -1.78
RXT3YDL076C SDC1Q03323 175 aa3.94□□□□□ -1.78
RXT3YDL076C YMR010WQ03687 405 aa3.94□□□□□ -1.78
RXT3YDL076C YDR239CQ03780 787 aa3.94□□□□□ -1.78
RXT3YDL076C RDL1Q12305 139 aaKnown RBP3.94□□□□□ -1.78
RXT3YDL076C FLO9P39712 1322 aa3.94□□□□□ -1.78
RXT3YDL076C YPR096CO13587 100 aa3.93□□□□□ -1.78
RXT3YDL076C CAR1P00812 333 aaKnown RBP3.93□□□□□ -1.78
RXT3YDL076C CBP6P07253 162 aaPredicted RBP3.93□□□□□ -1.78
RXT3YDL076C RAP1P11938 827 aa3.93□□□□□ -1.78
RXT3YDL076C MRP13P12686 339 aa3.93□□□□□ -1.78
RXT3YDL076C UNG1P12887 359 aa3.93□□□□□ -1.78
RXT3YDL076C MAK32P23060 363 aa3.93□□□□□ -1.78
RXT3YDL076C CLB3P24870 427 aa3.93□□□□□ -1.78
RXT3YDL076C STP22P25604 385 aa3.93□□□□□ -1.78
RXT3YDL076C ATS1P31386 333 aa3.93□□□□□ -1.78
RXT3YDL076C SSE2P32590 693 aaKnown RBP3.93□□□□□ -1.78
RXT3YDL076C SEC17P32602 292 aa3.93□□□□□ -1.78
RXT3YDL076C DTR1P38125 572 aa3.93□□□□□ -1.78
RXT3YDL076C FAD1P38913 306 aa3.93□□□□□ -1.78
RXT3YDL076C YDR089WP38966 869 aa3.93□□□□□ -1.78
RXT3YDL076C PAC2P39937 518 aa3.93□□□□□ -1.78
RXT3YDL076C SGN1P40561 250 aaKnown RBP RIP-Chip data3.93□□□□□ -1.78not detected
RXT3YDL076C TOM22P49334 152 aa3.93□□□□□ -1.78
RXT3YDL076C TPC1P53257 314 aa3.93□□□□□ -1.78
RXT3YDL076C DBP6P53734 629 aaKnown RBP3.93□□□□□ -1.78
RXT3YDL076C NCE101Q02820 53 aa3.93□□□□□ -1.78
RXT3YDL076C YMR310CQ04867 317 aaPredicted RBP3.93□□□□□ -1.78
RXT3YDL076C HRI1Q05905 244 aaKnown RBP3.93□□□□□ -1.78
RXT3YDL076C ARR1Q06596 294 aa3.93□□□□□ -1.78
RXT3YDL076C GRC3Q07845 632 aa3.93□□□□□ -1.78
RXT3YDL076C NCA2Q12374 616 aa3.93□□□□□ -1.78
RXT3YDL076C PFK27Q12471 397 aaPredicted RBP3.93□□□□□ -1.78
RXT3YDL076C PDA1P16387 420 aaKnown RBP3.92□□□□□ -1.78
RXT3YDL076C REC107P21651 314 aa3.92□□□□□ -1.78
RXT3YDL076C MCK1P21965 375 aaKnown RBP3.92□□□□□ -1.78
RXT3YDL076C FRE2P36033 711 aa3.92□□□□□ -1.78
RXT3YDL076C VPS41P38959 992 aa3.92□□□□□ -1.78
RXT3YDL076C SHO1P40073 367 aa3.92□□□□□ -1.78
RXT3YDL076C GAB1P41733 394 aa3.92□□□□□ -1.78
RXT3YDL076C PTR3P43606 678 aa3.92□□□□□ -1.78
RXT3YDL076C PGU1P47180 361 aa3.92□□□□□ -1.78
RXT3YDL076C IMD4P50094 524 aaKnown RBP3.92□□□□□ -1.78
RXT3YDL076C CDH1P53197 566 aa3.92□□□□□ -1.78
RXT3YDL076C RHO5P53879 331 aaKnown RBP3.92□□□□□ -1.78
RXT3YDL076C RNY1Q02933 434 aaKnown RBP3.92□□□□□ -1.78
RXT3YDL076C YPL039WQ03080 316 aa3.92□□□□□ -1.78
RXT3YDL076C GLO2Q05584 274 aa3.92□□□□□ -1.78
RXT3YDL076C YHC1Q05900 231 aaKnown RBP3.92□□□□□ -1.78
RXT3YDL076C SEI1Q06058 285 aa3.92□□□□□ -1.78
RXT3YDL076C SLF1Q12034 447 aaKnown RBP3.92□□□□□ -1.78
RXT3YDL076C PSY3Q12318 242 aa3.92□□□□□ -1.78
RXT3YDL076C RPN6Q12377 434 aa3.92□□□□□ -1.78
RXT3YDL076C ISA2Q12425 185 aa3.92□□□□□ -1.78
RXT3YDL076C CBP2P03874 630 aaPredicted RBP3.91□□□□□ -1.78
RXT3YDL076C KSS1P14681 368 aa3.91□□□□□ -1.78
RXT3YDL076C AIM17P23180 465 aaKnown RBP3.91□□□□□ -1.78
RXT3YDL076C CLB2P24869 491 aa3.91□□□□□ -1.78
RXT3YDL076C YBR144CP34215 104 aa3.91□□□□□ -1.78
RXT3YDL076C TUL1P36096 758 aa3.91□□□□□ -1.78
RXT3YDL076C ZTA1P38230 334 aaKnown RBP3.91□□□□□ -1.78
RXT3YDL076C ICS2P38284 255 aa3.91□□□□□ -1.78
RXT3YDL076C NSG1P38837 291 aa3.91□□□□□ -1.78
RXT3YDL076C RIX1P38883 763 aaPredicted RBP3.91□□□□□ -1.78
RXT3YDL076C YPL107WQ02873 248 aa3.91□□□□□ -1.78
RXT3YDL076C KRE28Q04431 385 aa3.91□□□□□ -1.78
Retrieved 100 of 5,963 RNA–protein pairs in 29.6 ms