RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSH3	YCR092C	ITR1	P30605	584 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	ATP11	P32453	318 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	CPR5	P35176	225 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	TSC10	P38342	320 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	YJL193W	P39542	402 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	UFD1	P53044	361 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	NRG1	Q03125	231 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	TAF12	Q03761	539 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	RQC1	Q05468	723 aa	Known RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	YLR352W	Q06479	807 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	RAD34	Q06665	692 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	YNG1	Q08465	219 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	SNX3	Q08826	162 aa	Known RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	ACM1	Q08981	209 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	GDH1	P07262	454 aa	Known RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	NSP1	P14907	823 aa	Known RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	SNC1	P31109	117 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	FES1	P38260	290 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	ISC1	P40015	477 aa	Known RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	YGR201C	P42936	225 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	TAX4	P47030	604 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	CCC1	P47818	322 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	ECM9	Q02202	377 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	NUP116	Q02630	1113 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	SCS7	Q03529	384 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	YMR209C	Q03648	457 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	GMC2	Q06201	188 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	RRS1	Q08746	203 aa	Known RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	RAD28	Q12021	506 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	USB1	Q12208	290 aa	Known RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	YGR161W-C	Q3E744	92 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	MHF2	Q3E829	80 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	YGR035W-A	Q45U48	73 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	BEM2	P39960	2167 aa	Known RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	NUM1	Q00402	2748 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	RPL20A	P0CX23	172 aa	Known RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	RPL20B	P0CX24	172 aa	Predicted RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	PHO81	P17442	1178 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	ATP10	P18496	279 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	MAK32	P23060	363 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	AGP1	P25376	633 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	SEC17	P32602	292 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	YBR220C	P38318	560 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	YHR097C	P38809	366 aa	Known RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	ANS1	P38832	159 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	PTH1	P38876	190 aa	Known RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	SOP4	P39543	234 aa	Predicted RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	LSM5	P40089	93 aa	Known RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	IDP2	P41939	412 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	ALK1	P43633	760 aa	Known RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	DIE2	P50076	525 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	YNR068C	P53754	272 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	COG5	P53951	403 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	YPL067C	Q02754	198 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	RCE1	Q03530	315 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	SOV1	Q04748	898 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	SPR28	Q04921	423 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	PRP11	Q07350	266 aa	Predicted RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	DIA2	Q08496	732 aa	Predicted RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	RSA1	Q08932	381 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	RDL1	Q12305	139 aa	Known RBP	1.24	□□□□□ -2.21
MSH3	YCR092C	JLP1	Q12358	412 aa		1.24	□□□□□ -2.21
MSH3	YCR092C	TOR1	P35169	2470 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	TRX3	P25372	127 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	SEC65	P29478	273 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	CYS4	P32582	507 aa	Known RBP	1.23	□□□□□ -2.21
MSH3	YCR092C	SPT10	P35208	640 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	GLG1	P36143	616 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	VBA2	P38358	474 aa	Known RBP	1.23	□□□□□ -2.21
MSH3	YCR092C	FET3	P38993	636 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	RMD6	P39975	231 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	TOK1	P40310	691 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	BAP3	P41815	604 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	IRC7	P43623	340 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	YGL176C	P46945	554 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	YJL055W	P47044	245 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	SIP18	P50263	79 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	SOL1	P50278	321 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	SMM1	P53720	384 aa	Known RBP	1.23	□□□□□ -2.21
MSH3	YCR092C	ARC35	P53731	342 aa	Known RBP	1.23	□□□□□ -2.21
MSH3	YCR092C	TEX1	P53851	422 aa	Known RBP	1.23	□□□□□ -2.21
MSH3	YCR092C	RMI1	Q02685	241 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	SWF1	Q04629	336 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	YOR289W	Q12012	251 aa	Predicted RBP	1.23	□□□□□ -2.21
MSH3	YCR092C	YPL245W	Q12179	454 aa	Known RBP	1.23	□□□□□ -2.21
MSH3	YCR092C	YPR011C	Q12251	326 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	NCA2	Q12374	616 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	ZRT2	Q12436	422 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	CCW14	O13547	238 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	RPL11A	P0C0W9	174 aa	Known RBP	1.23	□□□□□ -2.21
MSH3	YCR092C	NOP1	P15646	327 aa	Known RBP	1.23	□□□□□ -2.21
MSH3	YCR092C	GRX2	P17695	143 aa	Known RBP	1.23	□□□□□ -2.21
MSH3	YCR092C	CHA1	P25379	360 aa	Known RBP	1.23	□□□□□ -2.21
MSH3	YCR092C	PRE2	P30656	287 aa	Known RBP	1.23	□□□□□ -2.21
MSH3	YCR092C	FPR2	P32472	135 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	SUR1	P33300	382 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	RPC25	P35718	212 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	SRY1	P36007	326 aa		1.23	□□□□□ -2.21
MSH3	YCR092C	CBT1	P36038	271 aa	Predicted RBP	1.23	□□□□□ -2.21
MSH3	YCR092C	LAS1	P36146	502 aa	Predicted RBP	1.23	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms