RNA–Protein interactions for RNA: YBL024W

NCL1, Transcript of S-adenosyl-L-methionine-dependent tRNA: m5C-methyltransferase, yeast

Gene NCL1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCL1	YBL024W	MRX9	Q07349	420 aa	Known RBP	1.83	□□□□□ -2.12
NCL1	YBL024W	PRM4	Q12498	284 aa		1.83	□□□□□ -2.12
NCL1	YBL024W	RPL21B	Q12672	160 aa	Known RBP	1.83	□□□□□ -2.12
NCL1	YBL024W	ERD1	P16151	362 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	HPR1	P17629	752 aa	Known RBP	1.82	□□□□□ -2.12
NCL1	YBL024W	MCH2	P36032	473 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	RCY1	P39531	840 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	SOP4	P39543	234 aa	Predicted RBP	1.82	□□□□□ -2.12
NCL1	YBL024W	ALD5	P40047	520 aa	Known RBP	1.82	□□□□□ -2.12
NCL1	YBL024W	SHQ1	P40486	507 aa	Predicted RBP	1.82	□□□□□ -2.12
NCL1	YBL024W	GDS1	P41913	522 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	STB1	P42845	420 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	SDT1	P53078	280 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	SPP2	Q02521	185 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	MHR1	Q06630	226 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	MIM1	Q08176	113 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	ERP3	Q12403	225 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	MHP1	P43638	1398 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	TDH3	P00359	332 aa	Known RBP RIP-Chip data	1.82	□□□□□ -2.12	not detected
NCL1	YBL024W	COX4	P04037	155 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	YSR3	P23501	404 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	IES6	P32617	166 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	1.82	□□□□□ -2.12	not detected
NCL1	YBL024W	YKL071W	P36086	256 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	PRE5	P40302	234 aa	Known RBP	1.82	□□□□□ -2.12
NCL1	YBL024W	TIS11	P47977	285 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	KEL2	P50090	882 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	UBC13	P52490	153 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	VHT1	P53241	593 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	RRN5	Q02983	363 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	BER1	Q06688	274 aa	Known RBP	1.82	□□□□□ -2.12
NCL1	YBL024W	ASR1	Q06834	288 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	RPN8	Q08723	338 aa	Known RBP	1.82	□□□□□ -2.12
NCL1	YBL024W	UTP23	Q12339	254 aa	Known RBP	1.82	□□□□□ -2.12
NCL1	YBL024W	IZH4	Q99393	312 aa		1.82	□□□□□ -2.12
NCL1	YBL024W	RPL16B	P26785	198 aa	Known RBP	1.81	□□□□□ -2.12
NCL1	YBL024W	YKL063C	P35725	167 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	RPC37	P36121	282 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	BMT2	P38278	337 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	PET100	P38958	111 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	YGL039W	P53183	348 aa	Known RBP	1.81	□□□□□ -2.12
NCL1	YBL024W	LSB1	P53281	241 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	RNH201	P53942	307 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	YLR152C	P54072	576 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	YPL077C	Q02831	240 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	MRX11	Q03079	207 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	ADD37	Q03233	198 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	PAL1	Q05518	499 aa	Known RBP	1.81	□□□□□ -2.12
NCL1	YBL024W	TAZ1	Q06510	381 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	SRO7	Q12038	1033 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	BGL2	P15703	313 aa	Known RBP	1.81	□□□□□ -2.12
NCL1	YBL024W	MRPL20	P22354	195 aa	Predicted RBP	1.81	□□□□□ -2.12
NCL1	YBL024W	PCL1	P24867	279 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	INO2	P26798	304 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	GCG1	P32656	232 aa	Known RBP	1.81	□□□□□ -2.12
NCL1	YBL024W	COT1	P32798	439 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	MRPL27	P36526	146 aa	Predicted RBP	1.81	□□□□□ -2.12
NCL1	YBL024W	GPI18	P38211	433 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	YBR062C	P38239	180 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	YJL118W	P47022	219 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	SWC4	P53201	476 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	NRM1	P53718	249 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	DTD1	Q07648	150 aa	Known RBP	1.81	□□□□□ -2.12
NCL1	YBL024W	MMT2	Q08970	484 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	POM33	Q12164	279 aa		1.81	□□□□□ -2.12
NCL1	YBL024W	POL30	P15873	258 aa	Known RBP	1.8	□□□□□ -2.12
NCL1	YBL024W	CYM1	P32898	989 aa		1.8	□□□□□ -2.12
NCL1	YBL024W	IMP3	P32899	183 aa	Predicted RBP	1.8	□□□□□ -2.12
NCL1	YBL024W	SMP1	P38128	452 aa		1.8	□□□□□ -2.12
NCL1	YBL024W	SHE3	P38272	425 aa	Known RBP	1.8	□□□□□ -2.12
NCL1	YBL024W	TAE1	P38340	232 aa		1.8	□□□□□ -2.12
NCL1	YBL024W	YPS5	P53057	165 aa		1.8	□□□□□ -2.12
NCL1	YBL024W	CDC14	Q00684	551 aa		1.8	□□□□□ -2.12
NCL1	YBL024W	TPS1	Q00764	495 aa	Known RBP	1.8	□□□□□ -2.12
NCL1	YBL024W	MRPS16	Q02608	121 aa		1.8	□□□□□ -2.12
NCL1	YBL024W	ATC1	Q04005	294 aa		1.8	□□□□□ -2.12
NCL1	YBL024W	TSA2	Q04120	196 aa		1.8	□□□□□ -2.12
NCL1	YBL024W	COX20	Q04935	205 aa		1.8	□□□□□ -2.12
NCL1	YBL024W	YLR446W	Q06204	433 aa		1.8	□□□□□ -2.12
NCL1	YBL024W	GPN3	Q06543	272 aa		1.8	□□□□□ -2.12
NCL1	YBL024W	YOL107W	Q12239	342 aa		1.8	□□□□□ -2.12
NCL1	YBL024W	BI3	Q9ZZW7	517 aa		1.8	□□□□□ -2.12
NCL1	YBL024W	SSK22	P25390	1331 aa	Predicted RBP	1.8	□□□□□ -2.12
NCL1	YBL024W	COX2	P00410	251 aa		1.79	□□□□□ -2.12
NCL1	YBL024W	RPL24A	P04449	155 aa	Known RBP	1.79	□□□□□ -2.12
NCL1	YBL024W	LDB16	P25587	256 aa		1.79	□□□□□ -2.12
NCL1	YBL024W	DED81	P38707	554 aa	Known RBP	1.79	□□□□□ -2.12
NCL1	YBL024W	SMC2	P38989	1170 aa	Known RBP	1.79	□□□□□ -2.12
NCL1	YBL024W	MRX5	P47007	382 aa		1.79	□□□□□ -2.12
NCL1	YBL024W	SDS23	P53172	527 aa		1.79	□□□□□ -2.12
NCL1	YBL024W	YNR066C	P53752	436 aa		1.79	□□□□□ -2.12
NCL1	YBL024W	YNL040W	P53960	456 aa	Predicted RBP	1.79	□□□□□ -2.12
NCL1	YBL024W	HAL1	Q01766	294 aa		1.79	□□□□□ -2.12
NCL1	YBL024W	RPL21A	Q02753	160 aa	Known RBP	1.79	□□□□□ -2.12
NCL1	YBL024W	VBA1	Q04301	562 aa		1.79	□□□□□ -2.12
NCL1	YBL024W	GMC1	Q04399	608 aa		1.79	□□□□□ -2.12
NCL1	YBL024W	YDR018C	Q12185	396 aa		1.79	□□□□□ -2.12
NCL1	YBL024W	ILV1	P00927	576 aa	Known RBP	1.79	□□□□□ -2.12
NCL1	YBL024W	RSR1	P13856	272 aa		1.79	□□□□□ -2.12
NCL1	YBL024W	TFS1	P14306	219 aa		1.79	□□□□□ -2.12

Retrieved 100 of 5,963 RNA–protein pairs in 33 ms