RNA–Protein interactions for RNA: LSR1

LSR1, Transcript of U2 spliceosomal RNA (U2 snRNA), component of the spliceosome, yeastyeast

Gene LSR1, Length 1,175 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSR1LSR1 LOH1P47055 219 aa7.98□□□□□ -1.13
LSR1LSR1 MDE1P47095 244 aa7.98□□□□□ -1.13
LSR1LSR1 SPC19Q03954 165 aa7.98□□□□□ -1.13
LSR1LSR1 RRN11Q04712 507 aa7.98□□□□□ -1.13
LSR1LSR1 SRO7Q12038 1033 aa7.98□□□□□ -1.13
LSR1LSR1 AEP3Q12089 606 aa7.98□□□□□ -1.13
LSR1LSR1 YDL177CQ12257 170 aa7.98□□□□□ -1.13
LSR1LSR1 INP53Q12271 1107 aa7.98□□□□□ -1.13
LSR1LSR1 MMP1Q12372 583 aa7.98□□□□□ -1.13
LSR1LSR1 APC2Q12440 853 aa7.98□□□□□ -1.13
LSR1LSR1 IPP1P00817 287 aaKnown RBP7.97□□□□□ -1.13
LSR1LSR1 MRP1P10662 321 aaKnown RBP7.97□□□□□ -1.13
LSR1LSR1 MRP2P10663 115 aaPredicted RBP7.97□□□□□ -1.13
LSR1LSR1 CKS1P20486 150 aaKnown RBP7.97□□□□□ -1.13
LSR1LSR1 PAU2P32612 120 aa7.97□□□□□ -1.13
LSR1LSR1 PTR2P32901 601 aa7.97□□□□□ -1.13
LSR1LSR1 VPS17P32913 551 aa7.97□□□□□ -1.13
LSR1LSR1 YKL097CP34245 136 aa7.97□□□□□ -1.13
LSR1LSR1 OAR1P35731 278 aa7.97□□□□□ -1.13
LSR1LSR1 YOR062CP36025 268 aa7.97□□□□□ -1.13
LSR1LSR1 COS8P38723 381 aa7.97□□□□□ -1.13
LSR1LSR1 GEP4P38812 185 aa7.97□□□□□ -1.13
LSR1LSR1 HRB1P38922 454 aaKnown RBP RIP-Chip data7.97□□□□□ -1.13not detected
LSR1LSR1 PZF1P39933 429 aa7.97□□□□□ -1.13
LSR1LSR1 ICE2P40499 491 aa7.97□□□□□ -1.13
LSR1LSR1 ZIM17P42844 174 aa7.97□□□□□ -1.13
LSR1LSR1 VOA1P53262 265 aa7.97□□□□□ -1.13
LSR1LSR1 YGR250CP53316 781 aaKnown RBP7.97□□□□□ -1.13
LSR1LSR1 YPR109WQ06104 294 aa7.97□□□□□ -1.13
LSR1LSR1 ATP14Q12349 124 aa7.97□□□□□ -1.13
LSR1LSR1 PSF1Q12488 208 aa7.97□□□□□ -1.13
LSR1LSR1 FAB1P34756 2278 aa7.97□□□□□ -1.13
LSR1LSR1 COX9P07255 59 aa7.96□□□□□ -1.14
LSR1LSR1 RPL3P14126 387 aaKnown RBP7.96□□□□□ -1.14
LSR1LSR1 PDA1P16387 420 aaKnown RBP7.96□□□□□ -1.14
LSR1LSR1 CDC23P16522 626 aa7.96□□□□□ -1.14
LSR1LSR1 HXT2P23585 541 aa7.96□□□□□ -1.14
LSR1LSR1 YCP4P25349 247 aaKnown RBP7.96□□□□□ -1.14
LSR1LSR1 ACB1P31787 87 aa7.96□□□□□ -1.14
LSR1LSR1 ECM25P32525 599 aa7.96□□□□□ -1.14
LSR1LSR1 RML2P32611 393 aa7.96□□□□□ -1.14
LSR1LSR1 PRE3P38624 215 aa7.96□□□□□ -1.14
LSR1LSR1 ANS1P38832 159 aa7.96□□□□□ -1.14
LSR1LSR1 HIS6P40545 261 aa7.96□□□□□ -1.14
LSR1LSR1 LEM3P42838 414 aa7.96□□□□□ -1.14
LSR1LSR1 BNA6P43619 295 aa7.96□□□□□ -1.14
LSR1LSR1 JAC1P53193 184 aa7.96□□□□□ -1.14
LSR1LSR1 YDR249CQ03787 373 aa7.96□□□□□ -1.14
LSR1LSR1 GAS2Q06135 555 aa7.96□□□□□ -1.14
LSR1LSR1 KEI1Q06346 221 aa7.96□□□□□ -1.14
LSR1LSR1 CYK3Q07533 885 aa7.96□□□□□ -1.14
LSR1LSR1 AHC1Q12433 566 aa7.96□□□□□ -1.14
LSR1LSR1 BAR1P12630 587 aa7.95□□□□□ -1.14
LSR1LSR1 UTR1P21373 530 aa7.95□□□□□ -1.14
LSR1LSR1 HCM1P25364 564 aa7.95□□□□□ -1.14
LSR1LSR1 PUT3P25502 979 aaPredicted RBP7.95□□□□□ -1.14
LSR1LSR1 ATS1P31386 333 aa7.95□□□□□ -1.14
LSR1LSR1 WBP1P33767 430 aaKnown RBP7.95□□□□□ -1.14
LSR1LSR1 MTH1P35198 433 aa7.95□□□□□ -1.14
LSR1LSR1 CBT1P36038 271 aaPredicted RBP7.95□□□□□ -1.14
LSR1LSR1 MRPL16P38064 232 aa7.95□□□□□ -1.14
LSR1LSR1 MAL32P38158 584 aa7.95□□□□□ -1.14
LSR1LSR1 RRP3P38712 501 aaKnown RBP7.95□□□□□ -1.14
LSR1LSR1 FMP52P40008 231 aa7.95□□□□□ -1.14
LSR1LSR1 LRO1P40345 661 aa7.95□□□□□ -1.14
LSR1LSR1 IDS2P46958 469 aa7.95□□□□□ -1.14
LSR1LSR1 AIM25P47140 327 aa7.95□□□□□ -1.14
LSR1LSR1 IBA57P47158 497 aa7.95□□□□□ -1.14
LSR1LSR1 COQ5P49017 307 aa7.95□□□□□ -1.14
LSR1LSR1 MAL12P53341 584 aa7.95□□□□□ -1.14
LSR1LSR1 ASI3P53983 676 aa7.95□□□□□ -1.14
LSR1LSR1 TIM44Q01852 431 aa7.95□□□□□ -1.14
LSR1LSR1 SNT309Q06091 175 aaPredicted RBP7.95□□□□□ -1.14
LSR1LSR1 TAZ1Q06510 381 aa7.95□□□□□ -1.14
LSR1LSR1 GLO4Q12320 285 aa7.95□□□□□ -1.14
LSR1LSR1 SNU23Q12368 194 aaPredicted RBP7.95□□□□□ -1.14
LSR1LSR1 YGL194C-AQ2V2P6 80 aa7.95□□□□□ -1.14
LSR1LSR1 DFG16Q99234 619 aa7.95□□□□□ -1.14
LSR1LSR1 HIS5P07172 385 aa7.94□□□□□ -1.14
LSR1LSR1 MAG1P22134 296 aaKnown RBP7.94□□□□□ -1.14
LSR1LSR1 PPH21P23594 369 aa7.94□□□□□ -1.14
LSR1LSR1 RNA14P25298 677 aaKnown RBP7.94□□□□□ -1.14
LSR1LSR1 BOS1P25385 244 aa7.94□□□□□ -1.14
LSR1LSR1 FUN19P28003 413 aaPredicted RBP7.94□□□□□ -1.14
LSR1LSR1 ERG24P32462 438 aaKnown RBP7.94□□□□□ -1.14
LSR1LSR1 SRB5P32585 307 aa7.94□□□□□ -1.14
LSR1LSR1 PPG1P32838 368 aa7.94□□□□□ -1.14
LSR1LSR1 TCM62P38228 572 aaKnown RBP7.94□□□□□ -1.14
LSR1LSR1 RPP1P38786 293 aa7.94□□□□□ -1.14
LSR1LSR1 FAA3P39002 694 aa7.94□□□□□ -1.14
LSR1LSR1 YAL037WP39728 267 aa7.94□□□□□ -1.14
LSR1LSR1 RFC4P40339 323 aaKnown RBP7.94□□□□□ -1.14
LSR1LSR1 SDP1P40479 209 aa7.94□□□□□ -1.14
LSR1LSR1 TIR3P40552 269 aa7.94□□□□□ -1.14
LSR1LSR1 CAT5P41735 233 aa7.94□□□□□ -1.14
LSR1LSR1 SMK1P41808 388 aa7.94□□□□□ -1.14
LSR1LSR1 TPC1P53257 314 aa7.94□□□□□ -1.14
LSR1LSR1 YNR061CP53747 219 aa7.94□□□□□ -1.14
LSR1LSR1 CWC24P53769 259 aa7.94□□□□□ -1.14
LSR1LSR1 INP1Q03694 420 aa7.94□□□□□ -1.14
Retrieved 100 of 5,963 RNA–protein pairs in 181.4 ms