RNA–Protein interactions for RNA: ENST00000641756.1

PHGDH-226, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,132 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-226ENST00000641756 BTBD7Q9P203 1132 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 PACSIN2Q9UNF0 486 aaPredicted RBP19.43■□□□□ 0.7
PHGDH-226ENST00000641756 CSADQ9Y600 493 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 PTPRFP10586 1907 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 DENND3A2RUS2 1198 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 ERLIN1O75477 346 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 ADRB2P07550 413 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 C1orf220Q5T0J3 134 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 C10orf76Q5T2E6 689 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 ABHD15Q6UXT9 468 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 GADL1Q6ZQY3 521 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 VPS36Q86VN1 386 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 SULF1Q8IWU6 871 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 U2AF1L4Q8WU68 220 aaKnown RBP19.43■□□□□ 0.7
PHGDH-226ENST00000641756 SAAL1Q96ER3 474 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 IWS1Q96ST2 819 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 RNF181Q9P0P0 153 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 PCDHGC5Q9Y5F6 944 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 OTOFQ9HC10 1997 aa19.43■□□□□ 0.7
PHGDH-226ENST00000641756 PFASO15067 1338 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 FAM170AA1A519 330 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 GRID2IPA4D2P6 1211 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 ADSSP30520 456 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 LBX2Q6XYB7 198 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 SEPT14Q6ZU15 432 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 CYFIP1Q7L576 1253 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 CHST13Q8NET6 341 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 LNX1Q8TBB1 728 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-226ENST00000641756 ELP3Q9H9T3 547 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 NENFQ9UMX5 172 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 ARID2Q68CP9 1835 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 ZMYND10O75800 440 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 STAM2O75886 525 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 MATR3P43243 847 aaKnown RBP eCLIP19.42■□□□□ 0.7
PHGDH-226ENST00000641756 STXBP2Q15833 593 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 CCDC181Q5TID7 509 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 CBWD2Q8IUF1 395 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 SLC17A8Q8NDX2 589 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 OLIG1Q8TAK6 271 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 KIFAP3Q92845 792 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 MS4A14Q96JA4 679 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 FHDC1Q9C0D6 1143 aaPredicted RBP19.42■□□□□ 0.7
PHGDH-226ENST00000641756 XPNPEP1Q9NQW7 623 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.42■□□□□ 0.71e-6■■■■■ 90
PHGDH-226ENST00000641756 EXOC7Q9UPT5 735 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 LOC285556D6RIA3 1793 aa19.42■□□□□ 0.7
PHGDH-226ENST00000641756 ADGRA3Q8IWK6 1321 aa19.41■□□□□ 0.7
PHGDH-226ENST00000641756 DKC1O60832 514 aaKnown RBP eCLIP19.41■□□□□ 0.71e-16■■■■■ 39.7
PHGDH-226ENST00000641756 NOP2P46087 812 aaKnown RBP19.41■□□□□ 0.7
PHGDH-226ENST00000641756 MTERF2Q49AM1 385 aa19.41■□□□□ 0.7
PHGDH-226ENST00000641756 MIS18BP1Q6P0N0 1132 aa19.41■□□□□ 0.7
PHGDH-226ENST00000641756 WDR93Q6P2C0 686 aa19.41■□□□□ 0.7
PHGDH-226ENST00000641756 MAP4K3Q8IVH8 894 aa19.41■□□□□ 0.7
PHGDH-226ENST00000641756 ARHGEF19Q8IW93 802 aa19.41■□□□□ 0.7
PHGDH-226ENST00000641756 ZNF526Q8TF50 670 aaPredicted RBP19.41■□□□□ 0.7
PHGDH-226ENST00000641756 TMEM174Q8WUU8 243 aa19.41■□□□□ 0.7
PHGDH-226ENST00000641756 ZBTB9Q96C00 473 aa19.41■□□□□ 0.7
PHGDH-226ENST00000641756 GOLPH3Q9H4A6 298 aa19.41■□□□□ 0.7
PHGDH-226ENST00000641756 CYP26B1Q9NR63 512 aa19.41■□□□□ 0.7
PHGDH-226ENST00000641756 SUPT20HL2P0C7V6 817 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 CNGA1P29973 690 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 MEI1Q5TIA1 1274 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 GLYCTKQ8IVS8 523 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 SPATA4Q8NEY3 305 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 OTUD5Q96G74 571 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 UBE2TQ9NPD8 197 aaPredicted RBP19.4■□□□□ 0.7
PHGDH-226ENST00000641756 TSKSQ9UJT2 592 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 BTNL10A8MVZ5 291 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 TMCO5BA8MYB1 307 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 IRF6O14896 467 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 DGAT1O75907 488 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 ANXA13P27216 316 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 ALDH5A1P51649 535 aaPredicted RBP19.4■□□□□ 0.7
PHGDH-226ENST00000641756 SNRNP35Q16560 246 aaKnown RBP19.4■□□□□ 0.7
PHGDH-226ENST00000641756 PTPROQ16827 1216 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 MOB2Q70IA6 237 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 NCAPG2Q86XI2 1143 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 DNERQ8NFT8 737 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 UPF1Q92900 1129 aaKnown RBP eCLIP19.4■□□□□ 0.7
PHGDH-226ENST00000641756 CLMNQ96JQ2 1002 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 HINFPQ9BQA5 517 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 PAGR1Q9BTK6 254 aa19.4■□□□□ 0.7
PHGDH-226ENST00000641756 FOXN3O00409 490 aaPredicted RBP19.39■□□□□ 0.69
PHGDH-226ENST00000641756 N4BP1O75113 896 aaKnown RBP19.39■□□□□ 0.69
PHGDH-226ENST00000641756 EIF3JO75822 258 aaKnown RBP19.39■□□□□ 0.69
PHGDH-226ENST00000641756 H2AFZP0C0S5 128 aa19.39■□□□□ 0.69
PHGDH-226ENST00000641756 SNRPFP62306 86 aaKnown RBP19.39■□□□□ 0.69
PHGDH-226ENST00000641756 MRPS25P82663 173 aaKnown RBP19.39■□□□□ 0.69
PHGDH-226ENST00000641756 CETN1Q12798 172 aa19.39■□□□□ 0.69
PHGDH-226ENST00000641756 EPC2Q52LR7 807 aa19.39■□□□□ 0.69
PHGDH-226ENST00000641756 SLC39A4Q6P5W5 647 aa19.39■□□□□ 0.69
PHGDH-226ENST00000641756 H2AFVQ71UI9 128 aa19.39■□□□□ 0.69
PHGDH-226ENST00000641756 ZNF572Q7Z3I7 529 aaPredicted RBP19.39■□□□□ 0.69
PHGDH-226ENST00000641756 SLC30A5Q8TAD4 765 aa19.39■□□□□ 0.69
PHGDH-226ENST00000641756 SPIRE2Q8WWL2 714 aa19.39■□□□□ 0.69
PHGDH-226ENST00000641756 CCDC127Q96BQ5 260 aa19.39■□□□□ 0.69
PHGDH-226ENST00000641756 TMEM117Q9H0C3 514 aa19.39■□□□□ 0.69
PHGDH-226ENST00000641756 ATP6V0A4Q9HBG4 840 aa19.39■□□□□ 0.69
PHGDH-226ENST00000641756 PDLIM7Q9NR12 457 aa19.39■□□□□ 0.69
PHGDH-226ENST00000641756 L1RE1Q9UN81 338 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms