RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 HOXC8P31273 242 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 GPC3P51654 580 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 ZNF131P52739 623 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 CRYBB1P53674 252 aaPredicted RBP14.25□□□□□ -0.13
PHGDH-218ENST00000641491 TPM4P67936 248 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 TLE2Q04725 743 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 CAPSQ13938 189 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 PCBP1Q15365 356 aaKnown RBP eCLIP14.25□□□□□ -0.132e-6■■■□□ 14.6
PHGDH-218ENST00000641491 ZSCAN23Q3MJ62 389 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 CATSPER4Q7RTX7 472 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 ANKRD33Q7Z3H0 272 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 SRGAP1Q7Z6B7 1085 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 FAM126BQ8IXS8 530 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 GOLGA5Q8TBA6 731 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 OSMRQ99650 979 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 PRMT7Q9NVM4 692 aaPredicted RBP14.25□□□□□ -0.13
PHGDH-218ENST00000641491 CDY2AQ9Y6F7 541 aa14.25□□□□□ -0.13
PHGDH-218ENST00000641491 A0A087WZ62 844 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 BICDL2A1A5D9 508 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 FRMD3A2A2Y4 597 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 TULP1O00294 542 aaPredicted RBP14.24□□□□□ -0.13
PHGDH-218ENST00000641491 HNRNPDLO14979 420 aaKnown RBP14.24□□□□□ -0.13
PHGDH-218ENST00000641491 EIF3DO15371 548 aaKnown RBP eCLIP14.24□□□□□ -0.13
PHGDH-218ENST00000641491 CALUO43852 315 aaPredicted RBP14.24□□□□□ -0.13
PHGDH-218ENST00000641491 RPS6KA5O75582 802 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 PRKCBP05771 671 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 RAG1P15918 1043 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 SELPP16109 830 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 LIG4P49917 911 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 CDK7P50613 346 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 NLRP12P59046 1061 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 MDM2Q00987 491 aaPredicted RBP14.24□□□□□ -0.13
PHGDH-218ENST00000641491 PAK2Q13177 524 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 DRP2Q13474 957 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 KLHL10Q6JEL2 608 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 LRRC8DQ7L1W4 858 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 HAUS6Q7Z4H7 955 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 MLKLQ8NB16 471 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 ZNF668Q96K58 619 aaPredicted RBP14.24□□□□□ -0.13
PHGDH-218ENST00000641491 CEP89Q96ST8 783 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 FDXACB1Q9BRP7 624 aaPredicted RBP14.24□□□□□ -0.13
PHGDH-218ENST00000641491 ADPGKQ9BRR6 497 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 KIFC3Q9BVG8 833 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 MRPL4Q9BYD3 311 aaKnown RBP14.24□□□□□ -0.13
PHGDH-218ENST00000641491 CELF4Q9BZC1 486 aaKnown RBP14.24□□□□□ -0.13
PHGDH-218ENST00000641491 PDLIM7Q9NR12 457 aa14.24□□□□□ -0.13
PHGDH-218ENST00000641491 PITPNM1O00562 1244 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 GPR182O15218 404 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 EVI5O60447 810 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 ZSCAN20P17040 1043 aaPredicted RBP14.23□□□□□ -0.13
PHGDH-218ENST00000641491 NMT1P30419 496 aaKnown RBP14.23□□□□□ -0.13
PHGDH-218ENST00000641491 NCKAP1LP55160 1127 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 ADAM17P78536 824 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 POU5F1BQ06416 359 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 TYRO3Q06418 890 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 MAPK7Q13164 816 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 PRPF4BQ13523 1007 aaKnown RBP14.23□□□□□ -0.13
PHGDH-218ENST00000641491 SNX17Q15036 470 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 LRRC26Q2I0M4 334 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 NT5DC1Q5TFE4 455 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 RPAINQ86UA6 219 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 KSR1Q8IVT5 923 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 NELFCDQ8IXH7 590 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 DAW1Q8N136 415 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 USP38Q8NB14 1042 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 NOC3LQ8WTT2 800 aaKnown RBP14.23□□□□□ -0.13
PHGDH-218ENST00000641491 PRIMPOLQ96LW4 560 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 TCHPQ9BT92 498 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 NFKBIZQ9BYH8 718 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 PPP1R12CQ9BZL4 782 aa14.23□□□□□ -0.13
PHGDH-218ENST00000641491 TRIM6Q9C030 488 aaPredicted RBP14.23□□□□□ -0.13
PHGDH-218ENST00000641491 SCN10AQ9Y5Y9 1956 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 BECN2A8MW95 431 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 KLRC4O43908 158 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 FGFR1OPO95684 399 aaKnown RBP14.22□□□□□ -0.13
PHGDH-218ENST00000641491 CAVIN2O95810 425 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 MYBP10242 640 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 CKBP12277 381 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 EIF4BP23588 611 aaKnown RBP14.22□□□□□ -0.13
PHGDH-218ENST00000641491 PTENP60484 403 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 NFX1Q12986 1120 aaKnown RBP14.22□□□□□ -0.13
PHGDH-218ENST00000641491 PAK1Q13153 545 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 MORC3Q14149 939 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 ZNF720Q7Z2F6 126 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 HACE1Q8IYU2 909 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 C7orf61Q8IZ16 206 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 TMEM199Q8N511 208 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 LINC01465Q8N7H1 131 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 BSNDQ8WZ55 320 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 TSPY26PQ9H489 355 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 TMEM134Q9H6X4 195 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 CTNND2Q9UQB3 1225 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 GDAQ9Y2T3 454 aa14.22□□□□□ -0.13
PHGDH-218ENST00000641491 N4BP3O15049 544 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 PRPF6O94906 941 aaKnown RBP14.21□□□□□ -0.13
PHGDH-218ENST00000641491 CD4P01730 458 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 GHRP10912 638 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 DARSP14868 501 aaKnown RBP14.21□□□□□ -0.13
PHGDH-218ENST00000641491 RFC2P35250 354 aa14.21□□□□□ -0.13
PHGDH-218ENST00000641491 MKRN4PQ13434 485 aaPredicted RBP14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms