RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-222ENST00000640634 PPME1Q9Y570 386 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 A0A1W2PQ27 194 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 A0A1W2PQ64 194 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 A0A1W2PQD8 194 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 LRRIQ4A6NIV6 560 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 TTLL13PA6NNM8 815 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 M0QZ92 97 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 SLC26A4O43511 780 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 MGEA5O60502 916 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 DARSP14868 501 aaKnown RBP12.11□□□□□ -0.47
SCARB2-222ENST00000640634 GUCY2CP25092 1073 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 AFMP43652 599 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 CRYBB1P53674 252 aaPredicted RBP12.11□□□□□ -0.47
SCARB2-222ENST00000640634 PPIGQ13427 754 aaKnown RBP eCLIP12.11□□□□□ -0.47
SCARB2-222ENST00000640634 GIT2Q14161 759 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 PLEKHG4Q58EX7 1191 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 FAM109BQ6ICB4 259 aaPredicted RBP12.11□□□□□ -0.47
SCARB2-222ENST00000640634 TSHZ1Q6ZSZ6 1077 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 TCP11Q8WWU5 503 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 JPH2Q9BR39 696 aaPredicted RBP12.11□□□□□ -0.47
SCARB2-222ENST00000640634 COLQQ9Y215 455 aaPredicted RBP12.11□□□□□ -0.47
SCARB2-222ENST00000640634 PTPRSQ13332 1948 aa12.11□□□□□ -0.47
SCARB2-222ENST00000640634 FAM237AA0A1B0GTK4 181 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 B4GALT5O43286 388 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 PRPF40AO75400 957 aaKnown RBP12.1□□□□□ -0.47
SCARB2-222ENST00000640634 RPS6KA5O75582 802 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 PRR29P0C7W0 189 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 IBSPP21815 317 aaPredicted RBP12.1□□□□□ -0.47
SCARB2-222ENST00000640634 EIF4BP23588 611 aaKnown RBP12.1□□□□□ -0.47
SCARB2-222ENST00000640634 PEX3P56589 373 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 NFX1Q12986 1120 aaKnown RBP12.1□□□□□ -0.47
SCARB2-222ENST00000640634 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.1□□□□□ -0.47
SCARB2-222ENST00000640634 TMEM87AQ8NBN3 555 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 DDX12PQ92771 950 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 HPS3Q969F9 1004 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 DNAJC19Q96DA6 116 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 FGFBP2Q9BYJ0 223 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 ZHX3Q9H4I2 956 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 ERVK-5Q9HDB9 667 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 KBTBD4Q9NVX7 518 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 ST3GAL5Q9UNP4 418 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 TRIOBPQ9H2D6 2365 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 CHD7Q9P2D1 2997 aa12.1□□□□□ -0.47
SCARB2-222ENST00000640634 GAS2O43903 313 aaKnown RBP12.09□□□□□ -0.47
SCARB2-222ENST00000640634 KRT18P05783 430 aaKnown RBP12.09□□□□□ -0.47
SCARB2-222ENST00000640634 RFC2P35250 354 aa12.09□□□□□ -0.47
SCARB2-222ENST00000640634 SYKP43405 635 aa12.09□□□□□ -0.47
SCARB2-222ENST00000640634 NPTX2P47972 431 aa12.09□□□□□ -0.47
SCARB2-222ENST00000640634 DEFB103AP81534 67 aa12.09□□□□□ -0.47
SCARB2-222ENST00000640634 MBTD1Q05BQ5 628 aa12.09□□□□□ -0.47
SCARB2-222ENST00000640634 PAK2Q13177 524 aa12.09□□□□□ -0.47
SCARB2-222ENST00000640634 SNW1Q13573 536 aaKnown RBP12.09□□□□□ -0.47
SCARB2-222ENST00000640634 SV2BQ7L1I2 683 aa12.09□□□□□ -0.47
SCARB2-222ENST00000640634 RTN4RL1Q86UN2 441 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-222ENST00000640634 CDR2LQ86X02 465 aaPredicted RBP12.09□□□□□ -0.47
SCARB2-222ENST00000640634 IQUBQ8NA54 791 aa12.09□□□□□ -0.47
SCARB2-222ENST00000640634 IKZF4Q9H2S9 585 aa12.09□□□□□ -0.47
SCARB2-222ENST00000640634 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.08□□□□□ -0.47
SCARB2-222ENST00000640634 ZBBXA8MT70 800 aa12.08□□□□□ -0.47
SCARB2-222ENST00000640634 GRXCR1A8MXD5 290 aa12.08□□□□□ -0.47
SCARB2-222ENST00000640634 INO80B-WBP1J3KQ70 363 aa12.08□□□□□ -0.47
SCARB2-222ENST00000640634 SLC16A4O15374 487 aa12.08□□□□□ -0.47
SCARB2-222ENST00000640634 NR1I2O75469 434 aa12.08□□□□□ -0.47
SCARB2-222ENST00000640634 FGBP02675 491 aa12.08□□□□□ -0.47
SCARB2-222ENST00000640634 PTENP60484 403 aa12.08□□□□□ -0.47
SCARB2-222ENST00000640634 CUL4BQ13620 913 aa12.08□□□□□ -0.47
SCARB2-222ENST00000640634 MXD4Q14582 209 aaPredicted RBP12.08□□□□□ -0.47
SCARB2-222ENST00000640634 PRPF38BQ5VTL8 546 aaKnown RBP12.08□□□□□ -0.47
SCARB2-222ENST00000640634 TAS1R3Q7RTX0 852 aa12.08□□□□□ -0.47
SCARB2-222ENST00000640634 ZNF410Q86VK4 478 aa12.08□□□□□ -0.47
SCARB2-222ENST00000640634 FMR1NBQ8N0W7 255 aaPredicted RBP12.08□□□□□ -0.47
SCARB2-222ENST00000640634 GLIS3Q8NEA6 775 aa12.08□□□□□ -0.47
SCARB2-222ENST00000640634 ENGASEQ8NFI3 743 aa12.08□□□□□ -0.47
SCARB2-222ENST00000640634 KIFAP3Q92845 792 aa12.08□□□□□ -0.47
SCARB2-222ENST00000640634 ERCC4Q92889 916 aaPredicted RBP12.08□□□□□ -0.47
SCARB2-222ENST00000640634 GCOM2Q9BZD3 368 aaPredicted RBP12.08□□□□□ -0.47
SCARB2-222ENST00000640634 TRIM9Q9C026 710 aa12.08□□□□□ -0.47
SCARB2-222ENST00000640634 INO80BQ9C086 356 aaPredicted RBP12.08□□□□□ -0.47
SCARB2-222ENST00000640634 TBC1D7Q9P0N9 293 aa12.08□□□□□ -0.47
SCARB2-222ENST00000640634 MICAL3Q7RTP6 2002 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 GOLGA6L4A6NEF3 574 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 CCDC169A6NNP5 214 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 ZNF202O95125 648 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 NAMPTP43490 491 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 CDCA2Q69YH5 1023 aaPredicted RBP12.08□□□□□ -0.48
SCARB2-222ENST00000640634 CNKSR3Q6P9H4 555 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 CLEC17AQ6ZS10 378 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 SFR1Q86XK3 245 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 MICAL1Q8TDZ2 1067 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 SEPT8Q92599 483 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 PAGE5Q96GU1 130 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 CPB2Q96IY4 423 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 RNPC3Q96LT9 517 aaKnown RBP12.08□□□□□ -0.48
SCARB2-222ENST00000640634 FIZ1Q96SL8 496 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 CCDC113Q9H0I3 377 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 TNMDQ9H2S6 317 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 MYH11P35749 1972 aa12.08□□□□□ -0.48
SCARB2-222ENST00000640634 TSPAN1O60635 241 aa12.07□□□□□ -0.48
SCARB2-222ENST00000640634 FAM13AO94988 1023 aa12.07□□□□□ -0.48
SCARB2-222ENST00000640634 RPLP2P05387 115 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms