RNA–Protein interactions for RNA: ENST00000640264.1

HNRNPU-227, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 3

Gene HNRNPU, Length 328 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-227ENST00000640264 ORC3Q9UBD5 711 aaPredicted RBP11.9□□□□□ -0.5
HNRNPU-227ENST00000640264 HCSTQ9UBK5 93 aa11.9□□□□□ -0.5
HNRNPU-227ENST00000640264 COL1A2P08123 1366 aa11.9□□□□□ -0.5
HNRNPU-227ENST00000640264 CNTNAP5Q8WYK1 1306 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 FAM237AA0A1B0GTK4 181 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 HIDE1A8MVS5 230 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 ATG7O95352 703 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 ARP10275 920 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 NAPAP54920 295 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 ITIH3Q06033 890 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 ITGB3BPQ13352 177 aaPredicted RBP11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 RTN1Q16799 776 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 CEP55Q53EZ4 464 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 ZNF484Q5JVG2 852 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 KCNT2Q6UVM3 1135 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 TMC7Q7Z402 723 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 TEX2Q8IWB9 1127 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 LRRC43Q8N309 656 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 TMEM40Q8WWA1 233 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 MRFAP1L1Q96HT8 127 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 ZNF558Q96NG5 402 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 BPIFA3Q9BQP9 254 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 ADAM7Q9H2U9 754 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 SPG21Q9NZD8 308 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 PCDHA7Q9UN72 937 aa11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 R3HCC1Q9Y3T6 440 aaKnown RBP11.89□□□□□ -0.51
HNRNPU-227ENST00000640264 SPTBN4Q9H254 2564 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 IGKV6D-21A0A0A0MT36 114 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 PRR23AA6NEV1 266 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 CPLX1O14810 134 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 ZBTB43O43298 467 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 FOSP01100 380 aaPredicted RBP11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 ZNF76P36508 570 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 NBL1P41271 181 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 MTHFRP42898 656 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 SMC1AQ14683 1233 aaKnown RBP11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 BMS1Q14692 1282 aaKnown RBP11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 KIZQ2M2Z5 673 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 WWC2Q6AWC2 1192 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 PPP1R18Q6NYC8 613 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 MIS18BP1Q6P0N0 1132 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 PDXDC2PQ6P474 469 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 ABHD15Q6UXT9 468 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 ASCL5Q7RTU5 278 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 LUZP1Q86V48 1076 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 FAM228AQ86W67 206 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 METTL13Q8N6R0 699 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 TMEM105Q8N8V8 129 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 FSIP1Q8NA03 581 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 TIGD1Q96MW7 591 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 CASD1Q96PB1 797 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 PPP1R16BQ96T49 567 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 OSMRQ99650 979 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 KCNF1Q9H3M0 494 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 MFSD1Q9H3U5 465 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 TTC12Q9H892 705 aaPredicted RBP11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 ZNF302Q9NR11 478 aa11.88□□□□□ -0.51
HNRNPU-227ENST00000640264 MYH9P35579 1960 aaKnown RBP11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 GOLGA8AA7E2F4 631 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 C2CD4DB7Z1M9 353 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 hCG_1984214I3L0E3 225 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 DDX39AO00148 427 aaKnown RBP11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 MEIS1O00470 390 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 SPTLC2O15270 562 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 NEMFO60524 1076 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 PPP6R2O75170 966 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 CCNE2O96020 404 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 ZSCAN20P17040 1043 aaPredicted RBP11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 METAP2P50579 478 aaKnown RBP eCLIP11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 ADCY7P51828 1080 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 DSC3Q14574 896 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 STK38Q15208 465 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 NTRK3Q16288 839 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 ASTLQ6HA08 431 aaPredicted RBP11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 LRRC55Q6ZSA7 311 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 ELOA2Q8IYF1 753 aaPredicted RBP11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 ZNF713Q8N859 430 aaPredicted RBP11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 MRPL43Q8N983 215 aaKnown RBP11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 MYRIPQ8NFW9 859 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 NKD2Q969F2 451 aaPredicted RBP11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 MAP7D2Q96T17 732 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 DNAJC25Q9H1X3 360 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 POMKQ9H5K3 350 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 RIC8AQ9NPQ8 531 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 NAP1L2Q9ULW6 460 aaPredicted RBP11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 HCFC2Q9Y5Z7 792 aa11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 MORC2Q9Y6X9 1032 aaPredicted RBP11.87□□□□□ -0.51
HNRNPU-227ENST00000640264 RIF1Q5UIP0 2472 aaKnown RBP11.86□□□□□ -0.51
HNRNPU-227ENST00000640264 C2orf71A6NGG8 1288 aa11.86□□□□□ -0.51
HNRNPU-227ENST00000640264 CLASP2O75122 1294 aaKnown RBP11.86□□□□□ -0.51
HNRNPU-227ENST00000640264 GPR32O75388 356 aa11.86□□□□□ -0.51
HNRNPU-227ENST00000640264 C22orf31O95567 290 aa11.86□□□□□ -0.51
HNRNPU-227ENST00000640264 VTNP04004 478 aa11.86□□□□□ -0.51
HNRNPU-227ENST00000640264 CMA1P23946 247 aa11.86□□□□□ -0.51
HNRNPU-227ENST00000640264 U2AF2P26368 475 aaKnown RBP eCLIP11.86□□□□□ -0.513e-23■■□□□ 13.4
HNRNPU-227ENST00000640264 CA8P35219 290 aa11.86□□□□□ -0.51
HNRNPU-227ENST00000640264 PBX3P40426 434 aa11.86□□□□□ -0.51
HNRNPU-227ENST00000640264 ME1P48163 572 aa11.86□□□□□ -0.51
HNRNPU-227ENST00000640264 CLCN5P51795 746 aa11.86□□□□□ -0.51
HNRNPU-227ENST00000640264 SLC39A14Q15043 492 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms