RNA–Protein interactions for RNA: ENST00000638144.1

CLN6-225, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 576 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-225ENST00000638144 LPPQ93052 612 aa13.88□□□□□ -0.19
CLN6-225ENST00000638144 ZNF689Q96CS4 500 aaPredicted RBP13.88□□□□□ -0.19
CLN6-225ENST00000638144 CPB2Q96IY4 423 aa13.88□□□□□ -0.19
CLN6-225ENST00000638144 TGS1Q96RS0 853 aaKnown RBP13.88□□□□□ -0.19
CLN6-225ENST00000638144 GAS2L1Q99501 681 aaPredicted RBP13.88□□□□□ -0.19
CLN6-225ENST00000638144 RNF19AQ9NV58 838 aa13.88□□□□□ -0.19
CLN6-225ENST00000638144 USP20Q9Y2K6 914 aa13.88□□□□□ -0.19
CLN6-225ENST00000638144 STXBP5LQ9Y2K9 1186 aa13.88□□□□□ -0.19
CLN6-225ENST00000638144 PCDHB7Q9Y5E2 793 aa13.88□□□□□ -0.19
CLN6-225ENST00000638144 STK24Q9Y6E0 443 aa13.88□□□□□ -0.19
CLN6-225ENST00000638144 MRPL42Q9Y6G3 142 aaKnown RBP13.88□□□□□ -0.19
CLN6-225ENST00000638144 ATG2AQ2TAZ0 1938 aa13.88□□□□□ -0.19
CLN6-225ENST00000638144 NPHP3-ACAD11A0A0J9YXS1 232 aa13.87□□□□□ -0.19
CLN6-225ENST00000638144 MEIS3P2A8K0S8 358 aa13.87□□□□□ -0.19
CLN6-225ENST00000638144 ASAP2O43150 1006 aa13.87□□□□□ -0.19
CLN6-225ENST00000638144 ERLIN2O94905 339 aa13.87□□□□□ -0.19
CLN6-225ENST00000638144 LINC00271P0C7V0 271 aa13.87□□□□□ -0.19
CLN6-225ENST00000638144 ATF7P17544 494 aaPredicted RBP13.87□□□□□ -0.19
CLN6-225ENST00000638144 CTNNB1P35222 781 aa13.87□□□□□ -0.19
CLN6-225ENST00000638144 LONP1P36776 959 aaKnown RBP13.87□□□□□ -0.19
CLN6-225ENST00000638144 UBA7P41226 1012 aa13.87□□□□□ -0.19
CLN6-225ENST00000638144 ERVK-21P61565 698 aa13.87□□□□□ -0.19
CLN6-225ENST00000638144 STK38Q15208 465 aa13.87□□□□□ -0.19
CLN6-225ENST00000638144 CCDC85BQ15834 202 aaPredicted RBP13.87□□□□□ -0.19
CLN6-225ENST00000638144 HYIQ5T013 277 aa13.87□□□□□ -0.19
CLN6-225ENST00000638144 SRGAP1Q7Z6B7 1085 aa13.87□□□□□ -0.19
CLN6-225ENST00000638144 FIBCD1Q8N539 461 aa13.87□□□□□ -0.19
CLN6-225ENST00000638144 FBXO22Q8NEZ5 403 aa13.87□□□□□ -0.19
CLN6-225ENST00000638144 SYMPKQ92797 1274 aaKnown RBP13.87□□□□□ -0.19
CLN6-225ENST00000638144 AGPAT5Q9NUQ2 364 aa13.87□□□□□ -0.19
CLN6-225ENST00000638144 BRWD1Q9NSI6 2320 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 TTLL13PA6NNM8 815 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 SFI1A8K8P3 1242 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 TSPAN1O60635 241 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 LPXNO60711 386 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 HIP1RO75146 1068 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 EDN1P05305 212 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 PLA2G4BP0C869 781 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 HOXA11P31270 313 aaPredicted RBP13.86□□□□□ -0.19
CLN6-225ENST00000638144 NASPP49321 788 aaPredicted RBP13.86□□□□□ -0.19
CLN6-225ENST00000638144 FAM189BP81408 668 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 MAPK7Q13164 816 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 SLC39A14Q15043 492 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 EPC2Q52LR7 807 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 CLLU1OSQ5K130 101 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 RINT1Q6NUQ1 792 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 TMEM192Q8IY95 271 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 DAW1Q8N136 415 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 MAFAQ8NHW3 353 aaPredicted RBP13.86□□□□□ -0.19
CLN6-225ENST00000638144 HELQQ8TDG4 1101 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 CALML4Q96GE6 196 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 AK8Q96MA6 479 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 NT5C3AQ9H0P0 336 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 BLOC1S4Q9NUP1 217 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 TMEM161AQ9NX61 479 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 ZDHHC9Q9Y397 364 aa13.86□□□□□ -0.19
CLN6-225ENST00000638144 SLC12A3P55017 1021 aa13.85□□□□□ -0.19
CLN6-225ENST00000638144 DNM1Q05193 864 aaKnown RBP13.85□□□□□ -0.19
CLN6-225ENST00000638144 MCM6Q14566 821 aa13.85□□□□□ -0.19
CLN6-225ENST00000638144 AMHR2Q16671 573 aa13.85□□□□□ -0.19
CLN6-225ENST00000638144 UBXN11Q5T124 520 aa13.85□□□□□ -0.19
CLN6-225ENST00000638144 CDCA2Q69YH5 1023 aaPredicted RBP13.85□□□□□ -0.19
CLN6-225ENST00000638144 C1orf186Q6ZWK4 172 aa13.85□□□□□ -0.19
CLN6-225ENST00000638144 ZNF598Q86UK7 904 aaKnown RBP13.85□□□□□ -0.19
CLN6-225ENST00000638144 GPBP1Q86WP2 473 aa13.85□□□□□ -0.19
CLN6-225ENST00000638144 CMTR2Q8IYT2 770 aaKnown RBP13.85□□□□□ -0.19
CLN6-225ENST00000638144 KRI1Q8N9T8 703 aaKnown RBP13.85□□□□□ -0.19
CLN6-225ENST00000638144 LINC00301Q8NCQ3 95 aa13.85□□□□□ -0.19
CLN6-225ENST00000638144 DEPTORQ8TB45 409 aa13.85□□□□□ -0.19
CLN6-225ENST00000638144 ZNF396Q96N95 335 aaPredicted RBP13.85□□□□□ -0.19
CLN6-225ENST00000638144 EIF2AQ9BY44 585 aaKnown RBP13.85□□□□□ -0.19
CLN6-225ENST00000638144 FAM105AQ9NUU6 356 aa13.85□□□□□ -0.19
CLN6-225ENST00000638144 DACT1Q9NYF0 836 aa13.85□□□□□ -0.19
CLN6-225ENST00000638144 INPP5FQ9Y2H2 1132 aa13.85□□□□□ -0.19
CLN6-225ENST00000638144 SRPRBQ9Y5M8 271 aaKnown RBP13.85□□□□□ -0.19
CLN6-225ENST00000638144 PLXNA4Q9HCM2 1894 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 UNC80Q8N2C7 3258 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 TCHHQ07283 1943 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 A0A087X0B3 334 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 A0A0U1RQF3 1178 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 CCDC169A6NNP5 214 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 SPTLC2O15270 562 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 ARF4P18085 180 aaPredicted RBP13.84□□□□□ -0.19
CLN6-225ENST00000638144 PBX3P40426 434 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 PEX3P56589 373 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 BECN1Q14457 450 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 SPOUT1Q5T280 376 aaKnown RBP13.84□□□□□ -0.19
CLN6-225ENST00000638144 IFNLR1Q8IU57 520 aaPredicted RBP13.84□□□□□ -0.19
CLN6-225ENST00000638144 ZBTB8OSQ8IWT0 167 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 SYT2Q8N9I0 419 aaPredicted RBP13.84□□□□□ -0.19
CLN6-225ENST00000638144 RAD54LQ92698 747 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 KIFAP3Q92845 792 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 IFT74Q96LB3 600 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 APOL6Q9BWW8 343 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 PANK2Q9BZ23 570 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 PRDM6Q9NQX0 595 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 CHST12Q9NRB3 414 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 HES2Q9Y543 173 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 PCDHB2Q9Y5E7 798 aa13.84□□□□□ -0.19
CLN6-225ENST00000638144 A0A0C4DFX4 3053 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms