RNA–Protein interactions for RNA: ENST00000637594.1

CLN8-214, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 406 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-214ENST00000637594 APOL5Q9BWW9 433 aa9.89□□□□□ -0.83
CLN8-214ENST00000637594 ZSWIM6Q9HCJ5 1215 aa9.89□□□□□ -0.83
CLN8-214ENST00000637594 FAM105AQ9NUU6 356 aa9.89□□□□□ -0.83
CLN8-214ENST00000637594 TBC1D13Q9NVG8 400 aa9.89□□□□□ -0.83
CLN8-214ENST00000637594 KANSL3Q9P2N6 904 aa9.89□□□□□ -0.83
CLN8-214ENST00000637594 DDX11L8A8MPP1 907 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 CHMP2AO43633 222 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 DEXIO95424 95 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 C1RP00736 705 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 ALDH2P05091 517 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 HOXA11P31270 313 aaPredicted RBP9.88□□□□□ -0.83
CLN8-214ENST00000637594 CLCN5P51795 746 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 PPP2R5CQ13362 524 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 TOB2Q14106 344 aaPredicted RBP9.88□□□□□ -0.83
CLN8-214ENST00000637594 PCBP1Q15365 356 aaKnown RBP eCLIP9.88□□□□□ -0.83
CLN8-214ENST00000637594 MTERF2Q49AM1 385 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 TWF2Q6IBS0 349 aaKnown RBP9.88□□□□□ -0.83
CLN8-214ENST00000637594 PPP4R3AQ6IN85 833 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 SRGAP1Q7Z6B7 1085 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 GPR149Q86SP6 731 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 ZBTB33Q86T24 672 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 SKAP1Q86WV1 359 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 TMEM173Q86WV6 379 aaPredicted RBP9.88□□□□□ -0.83
CLN8-214ENST00000637594 RHPN2Q8IUC4 686 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 TRIM22Q8IYM9 498 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 BLIDQ8IZY5 108 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 GJA10Q969M2 543 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 SCLT1Q96NL6 688 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 TMEM175Q9BSA9 504 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 RHOBTB2Q9BYZ6 727 aa9.88□□□□□ -0.83
CLN8-214ENST00000637594 SEPT9Q9UHD8 586 aaPredicted RBP9.88□□□□□ -0.83
CLN8-214ENST00000637594 USP34Q70CQ2 3546 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.87□□□□□ -0.83
CLN8-214ENST00000637594 TBX3O15119 743 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 INPPL1O15357 1258 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 ASAP2O43150 1006 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 DKC1O60832 514 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLN8-214ENST00000637594 ZC3H11AO75152 810 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLN8-214ENST00000637594 REC8O95072 547 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 TDP2O95551 362 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 EFEMP2O95967 443 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 PDGFBP01127 241 aaPredicted RBP9.87□□□□□ -0.83
CLN8-214ENST00000637594 P4HBP07237 508 aaKnown RBP9.87□□□□□ -0.83
CLN8-214ENST00000637594 EPCAMP16422 314 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 QARSP47897 775 aaKnown RBP9.87□□□□□ -0.83
CLN8-214ENST00000637594 SLC11A1P49279 550 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 CLCN4P51793 760 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 CCT2P78371 535 aaKnown RBP9.87□□□□□ -0.83
CLN8-214ENST00000637594 POU5F1BQ06416 359 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 NONOQ15233 471 aaKnown RBP eCLIP9.87□□□□□ -0.83
CLN8-214ENST00000637594 PTPN14Q15678 1187 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 RARS2Q5T160 578 aaKnown RBP9.87□□□□□ -0.83
CLN8-214ENST00000637594 ASTLQ6HA08 431 aaPredicted RBP9.87□□□□□ -0.83
CLN8-214ENST00000637594 CYP26C1Q6V0L0 522 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 AGMOQ6ZNB7 445 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 C15orf39Q6ZRI6 1047 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 CABP7Q86V35 215 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 ZNF280BQ86YH2 543 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 C12orf76Q8N812 135 aaPredicted RBP9.87□□□□□ -0.83
CLN8-214ENST00000637594 TDRD5Q8NAT2 981 aaKnown RBP9.87□□□□□ -0.83
CLN8-214ENST00000637594 TMEM87AQ8NBN3 555 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 BCL7CQ8WUZ0 217 aaPredicted RBP9.87□□□□□ -0.83
CLN8-214ENST00000637594 ATOH1Q92858 354 aaPredicted RBP9.87□□□□□ -0.83
CLN8-214ENST00000637594 LPPQ93052 612 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 KLHL5Q96PQ7 755 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 VN1R3Q9BXE9 311 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 TM6SF1Q9BZW5 370 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 DHX33Q9H6R0 707 aaKnown RBP9.87□□□□□ -0.83
CLN8-214ENST00000637594 NCOA5Q9HCD5 579 aaKnown RBP9.87□□□□□ -0.83
CLN8-214ENST00000637594 KCNMB3Q9NPA1 279 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 UBN1Q9NPG3 1134 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 CYP26B1Q9NR63 512 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 TSHZ2Q9NRE2 1034 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 AGPAT5Q9NUQ2 364 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 LIMD1Q9UGP4 676 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 DDX25Q9UHL0 483 aaKnown RBP9.87□□□□□ -0.83
CLN8-214ENST00000637594 CDH22Q9UJ99 828 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 PIN4Q9Y237 131 aaKnown RBP9.87□□□□□ -0.83
CLN8-214ENST00000637594 PCDHB2Q9Y5E7 798 aa9.87□□□□□ -0.83
CLN8-214ENST00000637594 CNTNAP2Q9UHC6 1331 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 TMEM150BA6NC51 233 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 MEIS3P2A8K0S8 358 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 EML1O00423 815 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 GAS2O43903 313 aaKnown RBP9.86□□□□□ -0.83
CLN8-214ENST00000637594 GFRA3O60609 400 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 DDHD2O94830 711 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 NCLP19338 710 aaKnown RBP9.86□□□□□ -0.83
CLN8-214ENST00000637594 RFC5P40937 340 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 NBL1P41271 181 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 RNASELQ05823 741 aaKnown RBP9.86□□□□□ -0.83
CLN8-214ENST00000637594 UBXN11Q5T124 520 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 KANK3Q6NY19 840 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 OTOP3Q7RTS5 596 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 CATSPER4Q7RTX7 472 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 KRT25Q7Z3Z0 450 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 KSR1Q8IVT5 923 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 C4orf19Q8IY42 314 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 KMT2EQ8IZD2 1858 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 TMEM105Q8N8V8 129 aa9.86□□□□□ -0.83
CLN8-214ENST00000637594 CNNM3Q8NE01 707 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms