RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 RSPH1Q8WYR4 309 aa14.12□□□□□ -0.15
CTSD-208ENST00000636843 ZNF668Q96K58 619 aaPredicted RBP14.12□□□□□ -0.15
CTSD-208ENST00000636843 RPGRIP1Q96KN7 1286 aa14.12□□□□□ -0.15
CTSD-208ENST00000636843 NIFKQ9BYG3 293 aaKnown RBP14.12□□□□□ -0.15
CTSD-208ENST00000636843 GCOM2Q9BZD3 368 aaPredicted RBP14.12□□□□□ -0.15
CTSD-208ENST00000636843 S1PR5Q9H228 398 aa14.12□□□□□ -0.15
CTSD-208ENST00000636843 ZSCAN16Q9H4T2 348 aaPredicted RBP14.12□□□□□ -0.15
CTSD-208ENST00000636843 NCOA5Q9HCD5 579 aaKnown RBP14.12□□□□□ -0.15
CTSD-208ENST00000636843 PCDHA4Q9UN74 947 aa14.12□□□□□ -0.15
CTSD-208ENST00000636843 ZNF318Q5VUA4 2279 aa14.11□□□□□ -0.15
CTSD-208ENST00000636843 TMEM221A6NGB7 291 aa14.11□□□□□ -0.15
CTSD-208ENST00000636843 H3BQV1 296 aa14.11□□□□□ -0.15
CTSD-208ENST00000636843 M0R296 226 aa14.11□□□□□ -0.15
CTSD-208ENST00000636843 TECP42680 631 aa14.11□□□□□ -0.15
CTSD-208ENST00000636843 DNM2P50570 870 aa14.11□□□□□ -0.15
CTSD-208ENST00000636843 DNM1Q05193 864 aaKnown RBP14.11□□□□□ -0.15
CTSD-208ENST00000636843 CLLU1OSQ5K130 101 aa14.11□□□□□ -0.15
CTSD-208ENST00000636843 MOXD1Q6UVY6 613 aa14.11□□□□□ -0.15
CTSD-208ENST00000636843 RNF169Q8NCN4 708 aa14.11□□□□□ -0.15
CTSD-208ENST00000636843 MRPL9Q9BYD2 267 aaKnown RBP14.11□□□□□ -0.15
CTSD-208ENST00000636843 GDPD2Q9HCC8 539 aa14.11□□□□□ -0.15
CTSD-208ENST00000636843 CHST12Q9NRB3 414 aa14.11□□□□□ -0.15
CTSD-208ENST00000636843 IGKV6-21A0A0C4DH24 114 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 CARNS1A5YM72 827 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 HIDE1A8MVS5 230 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 GADD45BO75293 160 aaPredicted RBP14.1□□□□□ -0.15
CTSD-208ENST00000636843 DEXIO95424 95 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 FGFR4P22455 802 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 BMS1Q14692 1282 aaKnown RBP14.1□□□□□ -0.15
CTSD-208ENST00000636843 GALNT17Q6IS24 598 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 LRSAM1Q6UWE0 723 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 B3GNT9Q6UX72 402 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 SLC39A11Q8N1S5 342 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 DAGLBQ8NCG7 672 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 GJA10Q969M2 543 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 PBXIP1Q96AQ6 731 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 TRAIPQ9BWF2 469 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 INO80BQ9C086 356 aaPredicted RBP14.1□□□□□ -0.15
CTSD-208ENST00000636843 SCAND2PQ9GZW5 306 aaPredicted RBP14.1□□□□□ -0.15
CTSD-208ENST00000636843 SEPT9Q9UHD8 586 aaPredicted RBP14.1□□□□□ -0.15
CTSD-208ENST00000636843 CPLX1O14810 134 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 LETM1O95202 739 aaPredicted RBP14.1□□□□□ -0.15
CTSD-208ENST00000636843 CTDNEP1O95476 244 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 PBX3P40426 434 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 ALDH7A1P49419 539 aaKnown RBP14.1□□□□□ -0.15
CTSD-208ENST00000636843 SMC1AQ14683 1233 aaKnown RBP14.1□□□□□ -0.15
CTSD-208ENST00000636843 MTERF2Q49AM1 385 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 TPRNQ4KMQ1 711 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 SYCE2Q6PIF2 218 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 CPLX2Q6PUV4 134 aaKnown RBP14.1□□□□□ -0.15
CTSD-208ENST00000636843 ZNF410Q86VK4 478 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 BLIDQ8IZY5 108 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 MRPL43Q8N983 215 aaKnown RBP14.1□□□□□ -0.15
CTSD-208ENST00000636843 HELQQ8TDG4 1101 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 CASP10Q92851 521 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 MBOAT7Q96N66 472 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 CEP89Q96ST8 783 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 PRRX2Q99811 253 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 JPH2Q9BR39 696 aaPredicted RBP14.1□□□□□ -0.15
CTSD-208ENST00000636843 TRIOO75962 3097 aa14.1□□□□□ -0.15
CTSD-208ENST00000636843 M0R2N6 131 aa14.09□□□□□ -0.15
CTSD-208ENST00000636843 CSDE1O75534 798 aaKnown RBP14.09□□□□□ -0.15
CTSD-208ENST00000636843 STBD1O95210 358 aa14.09□□□□□ -0.15
CTSD-208ENST00000636843 TDP2O95551 362 aa14.09□□□□□ -0.15
CTSD-208ENST00000636843 SKIP12755 728 aa14.09□□□□□ -0.15
CTSD-208ENST00000636843 SFPQP23246 707 aaKnown RBP eCLIP14.09□□□□□ -0.15
CTSD-208ENST00000636843 SIGLEC14Q08ET2 396 aa14.09□□□□□ -0.15
CTSD-208ENST00000636843 DRP2Q13474 957 aa14.09□□□□□ -0.15
CTSD-208ENST00000636843 LLGL2Q6P1M3 1020 aa14.09□□□□□ -0.15
CTSD-208ENST00000636843 SUGP1Q8IWZ8 645 aaKnown RBP14.09□□□□□ -0.15
CTSD-208ENST00000636843 ETNPPLQ8TBG4 499 aa14.09□□□□□ -0.15
CTSD-208ENST00000636843 A0A087WZ62 844 aa14.08□□□□□ -0.16
CTSD-208ENST00000636843 C2orf71A6NGG8 1288 aa14.08□□□□□ -0.16
CTSD-208ENST00000636843 MAFO75444 373 aaPredicted RBP14.08□□□□□ -0.16
CTSD-208ENST00000636843 PHKA2P46019 1235 aa14.08□□□□□ -0.16
CTSD-208ENST00000636843 BCAR1P56945 870 aa14.08□□□□□ -0.16
CTSD-208ENST00000636843 RESTQ13127 1097 aa14.08□□□□□ -0.16
CTSD-208ENST00000636843 NONOQ15233 471 aaKnown RBP eCLIP14.08□□□□□ -0.16
CTSD-208ENST00000636843 CCDC183Q5T5S1 534 aa14.08□□□□□ -0.16
CTSD-208ENST00000636843 FERMT3Q86UX7 667 aa14.08□□□□□ -0.16
CTSD-208ENST00000636843 FBXL6Q8N531 539 aa14.08□□□□□ -0.16
CTSD-208ENST00000636843 FDXACB1Q9BRP7 624 aaPredicted RBP14.08□□□□□ -0.16
CTSD-208ENST00000636843 SUCLA2Q9P2R7 463 aaPredicted RBP14.08□□□□□ -0.16
CTSD-208ENST00000636843 DDX25Q9UHL0 483 aaKnown RBP14.08□□□□□ -0.16
CTSD-208ENST00000636843 NR2E1Q9Y466 385 aa14.08□□□□□ -0.16
CTSD-208ENST00000636843 SYCE3A1L190 88 aa14.07□□□□□ -0.16
CTSD-208ENST00000636843 DTNBO60941 627 aa14.07□□□□□ -0.16
CTSD-208ENST00000636843 RAB27AP51159 221 aa14.07□□□□□ -0.16
CTSD-208ENST00000636843 POLGP54098 1239 aaPredicted RBP14.07□□□□□ -0.16
CTSD-208ENST00000636843 PSMC5P62195 406 aa14.07□□□□□ -0.16
CTSD-208ENST00000636843 ITIH3Q06033 890 aa14.07□□□□□ -0.16
CTSD-208ENST00000636843 NPY5RQ15761 445 aa14.07□□□□□ -0.16
CTSD-208ENST00000636843 PTPN21Q16825 1174 aa14.07□□□□□ -0.16
CTSD-208ENST00000636843 WDR81Q562E7 1941 aa14.07□□□□□ -0.16
CTSD-208ENST00000636843 ATL3Q6DD88 541 aa14.07□□□□□ -0.16
CTSD-208ENST00000636843 TWF2Q6IBS0 349 aaKnown RBP14.07□□□□□ -0.16
CTSD-208ENST00000636843 CES5AQ6NT32 575 aa14.07□□□□□ -0.16
CTSD-208ENST00000636843 KRT25Q7Z3Z0 450 aa14.07□□□□□ -0.16
CTSD-208ENST00000636843 ANP32BQ92688 251 aaKnown RBP14.07□□□□□ -0.16
CTSD-208ENST00000636843 TMEM169Q96HH4 297 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms