RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 CABS1Q96KC9 395 aa15.18■□□□□ 0.02
CACNA1A-228ENST00000636610 AGBL1Q96MI9 1066 aa15.18■□□□□ 0.02
CACNA1A-228ENST00000636610 ZBTB12Q9Y330 459 aaPredicted RBP15.18■□□□□ 0.02
CACNA1A-228ENST00000636610 DDX3YO15523 660 aaKnown RBP15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 SGPL1O95470 568 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 FOSP01100 380 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 POLR2MP0CAP2 368 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 MAP2K1Q02750 393 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 TAX1BP1Q86VP1 789 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 SYCE1Q8N0S2 351 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 SEMA4AQ9H3S1 761 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 CD248Q9HCU0 757 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 DDX20Q9UHI6 824 aaKnown RBP15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 GMNCA6NCL1 334 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 IPO5O00410 1097 aaKnown RBP15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 CYP26A1O43174 497 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 RAD17O75943 681 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 PPP2R2AP63151 447 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 LLGL2Q6P1M3 1020 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 AEBP2Q6ZN18 517 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 MMS22LQ6ZRQ5 1243 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 OLIG1Q8TAK6 271 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 FIZ1Q96SL8 496 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 WDR11Q9BZH6 1224 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 PSMD10O75832 226 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 CYP3A4P08684 503 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 LMNB1P20700 586 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 ACTN3Q08043 901 aaPredicted RBP15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 SLC29A2Q14542 456 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 DACT2Q5SW24 774 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 ARHGAP27Q6ZUM4 889 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 ZDHHC14Q8IZN3 488 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 IL31RAQ8NI17 732 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 MTFR1LQ9H019 292 aa15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 DBR1Q9UK59 544 aaKnown RBP15.17■□□□□ 0.02
CACNA1A-228ENST00000636610 AFF2P51816 1311 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 SLC16A4O15374 487 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 CTNND1O60716 968 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 FAM107AO95990 144 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 NPR1P16066 1061 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 BFSP1Q12934 665 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 LRRC14Q15048 493 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 CEP55Q53EZ4 464 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 DAW1Q8N136 415 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 ATP8B4Q8TF62 1192 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 CCDC114Q96M63 670 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 POLR3CQ9BUI4 534 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 AZI2Q9H6S1 392 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 TOPORSQ9NS56 1045 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 ANKRD63C9JTQ0 380 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 TBX3O15119 743 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 SLC16A3O15427 465 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 COMTP21964 271 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 PRELPP51888 382 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 NPEPPSP55786 919 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 FOXR2Q6PJQ5 311 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 PADI6Q6TGC4 694 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 CCDC121Q6ZUS5 278 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 SLFN11Q7Z7L1 901 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 SLC47A2Q86VL8 602 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 JAMLQ86YT9 394 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 CCDC105Q8IYK2 499 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 EPS8L3Q8TE67 593 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 DHX38Q92620 1227 aaKnown RBP15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 AGPAT1Q99943 283 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 JPH2Q9BR39 696 aaPredicted RBP15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 EFCC1Q9HA90 598 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 OLFML3Q9NRN5 406 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 SLC12A6Q9UHW9 1150 aa15.16■□□□□ 0.02
CACNA1A-228ENST00000636610 NHSQ6T4R5 1651 aa15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 CCDC188H7C350 402 aa15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 SPOPO43791 374 aa15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 TATDN1Q6P1N9 297 aa15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 RUFY4Q6ZNE9 571 aa15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 CD302Q8IX05 232 aa15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 PCDHB18PQ96TA0 734 aa15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 DNAJC5Q9H3Z4 198 aa15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 GJC1P36383 396 aa15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 PLA2G4FQ68DD2 849 aa15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 LMBRD2Q68DH5 695 aaPredicted RBP15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 TTC27Q6P3X3 843 aa15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 PODNQ7Z5L7 613 aa15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 C1orf54Q8WWF1 131 aa15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 PWWP2AQ96N64 755 aa15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 SUGT1Q9Y2Z0 365 aa15.15■□□□□ 0.02
CACNA1A-228ENST00000636610 GOLGA6L10A0A0M3HER8 536 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 CCDC169A6NNP5 214 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 TMEM253P0C7T8 217 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 PYGMP11217 842 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 GAP43P17677 238 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 PEX3P56589 373 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 BMT2Q1RMZ1 405 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 CCDC13Q8IYE1 715 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 PLEKHO2Q8TD55 490 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 RNF25Q96BH1 459 aaPredicted RBP15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 CALR3Q96L12 384 aaKnown RBP15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 NACC1Q96RE7 527 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 ERP44Q9BS26 406 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 PI4K2AQ9BTU6 479 aa15.14■□□□□ 0.01
CACNA1A-228ENST00000636610 TRIM7Q9C029 511 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms