RNA–Protein interactions for RNA: ENST00000636306.1

CHD2-223, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 1,755 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-223ENST00000636306 CDC42EP5Q6NZY7 148 aa11.6□□□□□ -0.55
CHD2-223ENST00000636306 NEK8Q86SG6 692 aa11.6□□□□□ -0.55
CHD2-223ENST00000636306 IRF2BP1Q8IU81 584 aa11.6□□□□□ -0.55
CHD2-223ENST00000636306 OR2W6PQ8NHA6 318 aa11.6□□□□□ -0.55
CHD2-223ENST00000636306 PPP2R3CQ969Q6 453 aa11.6□□□□□ -0.55
CHD2-223ENST00000636306 ZNF333Q96JL9 665 aa11.6□□□□□ -0.55
CHD2-223ENST00000636306 INPP4AQ96PE3 977 aaPredicted RBP11.6□□□□□ -0.55
CHD2-223ENST00000636306 YIPF2Q9BWQ6 316 aa11.6□□□□□ -0.55
CHD2-223ENST00000636306 PHACTR1Q9C0D0 580 aa11.6□□□□□ -0.55
CHD2-223ENST00000636306 STMN4Q9H169 189 aaPredicted RBP11.6□□□□□ -0.55
CHD2-223ENST00000636306 EHD2Q9NZN4 543 aa11.6□□□□□ -0.55
CHD2-223ENST00000636306 SERPINA10Q9UK55 444 aa11.6□□□□□ -0.55
CHD2-223ENST00000636306 MTMR7Q9Y216 660 aa11.6□□□□□ -0.55
CHD2-223ENST00000636306 STK38LQ9Y2H1 464 aa11.6□□□□□ -0.55
CHD2-223ENST00000636306 BZW2Q9Y6E2 419 aaKnown RBP11.6□□□□□ -0.55
CHD2-223ENST00000636306 SLX4Q8IY92 1834 aa11.6□□□□□ -0.55
CHD2-223ENST00000636306 SMCO2A6NFE2 343 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 CYTH3O43739 400 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 CEP104O60308 925 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 OR52Z1P0C646 297 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 CXCR5P32302 372 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 UBA7P41226 1012 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 PPP1R2P41236 205 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 CACNA2D1P54289 1103 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 OCRLQ01968 901 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 KPNB1Q14974 876 aaKnown RBP11.59□□□□□ -0.55
CHD2-223ENST00000636306 KBTBD12Q3ZCT8 623 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 USH1GQ495M9 461 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 RBM26Q5T8P6 1007 aaKnown RBP11.59□□□□□ -0.55
CHD2-223ENST00000636306 SFMBT2Q5VUG0 894 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 FOXB2Q5VYV0 432 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 CCDC80Q76M96 950 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 LRRC43Q8N309 656 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 USP38Q8NB14 1042 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 MDM1Q8TC05 714 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 EPSTI1Q96J88 318 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 IDI2Q9BXS1 227 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 RAB34Q9BZG1 259 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 CARD9Q9H257 536 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 INTS9Q9NV88 658 aaKnown RBP11.59□□□□□ -0.55
CHD2-223ENST00000636306 IL1RAPL1Q9NZN1 696 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 NKX1-2Q9UD57 310 aaPredicted RBP11.59□□□□□ -0.55
CHD2-223ENST00000636306 CCDC169A6NNP5 214 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 NVLO15381 856 aaKnown RBP11.59□□□□□ -0.55
CHD2-223ENST00000636306 NCK2O43639 380 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 AGTP01019 485 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 NUDT17P0C025 328 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 AKR1B1P15121 316 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 TRIM21P19474 475 aaKnown RBP11.59□□□□□ -0.55
CHD2-223ENST00000636306 VHLP40337 213 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 KIF11P52732 1056 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 PHEXP78562 749 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 TMEM266Q2M3C6 531 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 RNF43Q68DV7 783 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 CEP128Q6ZU80 1094 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 TMC3Q7Z5M5 1100 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 SMYD4Q8IYR2 804 aaPredicted RBP11.59□□□□□ -0.55
CHD2-223ENST00000636306 SCFD2Q8WU76 684 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 DCAF4Q8WV16 495 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 INPP5DQ92835 1189 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 ZNF653Q96CK0 615 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 MS4A14Q96JA4 679 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 NR1H4Q96RI1 486 aaPredicted RBP11.59□□□□□ -0.55
CHD2-223ENST00000636306 ERGIC2Q96RQ1 377 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 TMEM109Q9BVC6 243 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 CCSER1Q9C0I3 900 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 UBA5Q9GZZ9 404 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 LRMDAQ9H2I8 198 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 LUC7LQ9NQ29 371 aaKnown RBP11.59□□□□□ -0.55
CHD2-223ENST00000636306 DISC1Q9NRI5 854 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 TMOD2Q9NZR1 351 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 STOML1Q9UBI4 398 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 PLAGL2Q9UPG8 496 aa11.59□□□□□ -0.55
CHD2-223ENST00000636306 SIPA1L1O43166 1804 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 MYH7BA7E2Y1 1941 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 CCDC188H7C350 402 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 UPP2O95045 317 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 GOLGA8HP0CJ92 632 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 MAGEA10P43363 369 aaPredicted RBP11.58□□□□□ -0.56
CHD2-223ENST00000636306 SCNN1DP51172 638 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 ZNF543Q08ER8 600 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 MKRN3Q13064 507 aaKnown RBP11.58□□□□□ -0.56
CHD2-223ENST00000636306 SLC15A2Q16348 729 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 INF2Q27J81 1249 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 MUM1Q2TAK8 710 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 CNPY1Q3B7I2 92 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 APOBEC3HQ6NTF7 200 aaKnown RBP11.58□□□□□ -0.56
CHD2-223ENST00000636306 USP17L2Q6R6M4 530 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 ARHGAP27Q6ZUM4 889 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 USP49Q70CQ1 688 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 DBNDD1Q9H9R9 158 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 PCDH18Q9HCL0 1135 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 DDX4Q9NQI0 724 aaKnown RBP11.58□□□□□ -0.56
CHD2-223ENST00000636306 AGPAT5Q9NUQ2 364 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 DDX25Q9UHL0 483 aaKnown RBP11.58□□□□□ -0.56
CHD2-223ENST00000636306 PNMA2Q9UL42 364 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 PAIP2BQ9ULR5 123 aaKnown RBP11.58□□□□□ -0.56
CHD2-223ENST00000636306 SYNPO2Q9UMS6 1093 aa11.58□□□□□ -0.56
CHD2-223ENST00000636306 PNMA6FA0A0J9YX94 578 aa11.57□□□□□ -0.56
CHD2-223ENST00000636306 USP17L5A8MUK1 530 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms