RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 IFNLR1Q8IU57 520 aaPredicted RBP5.9□□□□□ -1.47
SCN1A-209ENST00000635750 TTC17Q96AE7 1141 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 MRPL48Q96GC5 212 aaKnown RBP5.9□□□□□ -1.47
SCN1A-209ENST00000635750 MUC3BQ9H195 1237 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 FOXP1Q9H334 677 aaPredicted RBP5.9□□□□□ -1.47
SCN1A-209ENST00000635750 BSDC1Q9NW68 430 aaPredicted RBP5.9□□□□□ -1.47
SCN1A-209ENST00000635750 ATP11BQ9Y2G3 1177 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 PCDHB15Q9Y5E8 787 aa5.9□□□□□ -1.47
SCN1A-209ENST00000635750 FAM107AO95990 144 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 PEX3P56589 373 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 GRIN2AQ12879 1464 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 RCSD1Q6JBY9 416 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 RHPN2Q8IUC4 686 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 DIS3LQ8TF46 1054 aaKnown RBP5.89□□□□□ -1.47
SCN1A-209ENST00000635750 PLXNC1O60486 1568 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 EDC4Q6P2E9 1401 aaKnown RBP5.89□□□□□ -1.47
SCN1A-209ENST00000635750 DDHD2O94830 711 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 USP17L8P0C7I0 530 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 ALDH1A3P47895 512 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 EPHB4P54760 987 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 IFT88Q13099 833 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 FBXW10Q5XX13 1052 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 FGD2Q7Z6J4 655 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 DEPDC7Q96QD5 511 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 MYCBPQ99417 103 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-209ENST00000635750 BRIP1Q9BX63 1249 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 MRPL4Q9BYD3 311 aaKnown RBP5.89□□□□□ -1.47
SCN1A-209ENST00000635750 ZMYND12Q9H0C1 365 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 NHEJ1Q9H9Q4 299 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-209ENST00000635750 PNMA6FA0A0J9YX94 578 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 KCNA6P17658 529 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 VCLP18206 1134 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 CDK17Q00537 523 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 ANKRD40Q6AI12 368 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 CNPY4Q8N129 248 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 COG1Q8WTW3 980 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 EPB41L5Q9HCM4 733 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 LOC102724428A0A0B4J2F2 783 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 ATP5HO75947 161 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 SLFN14P0C7P3 912 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 CSE1LP55060 971 aaKnown RBP5.89□□□□□ -1.47
SCN1A-209ENST00000635750 SIK1P57059 783 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 RWDD2BP57060 319 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 DR1Q01658 176 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 CAV1Q03135 178 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 CCDC184Q52MB2 194 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 USPL1Q5W0Q7 1092 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 C10orf53Q8N6V4 93 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 SYT2Q8N9I0 419 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-209ENST00000635750 TNIP2Q8NFZ5 429 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 P2RX5Q93086 422 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 ZNF560Q96MR9 790 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 ZNF302Q9NR11 478 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 STMN3Q9NZ72 180 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 PPP2R2CQ9Y2T4 447 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 IPPQ9Y573 584 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 PIK3C2GO75747 1445 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 ZMYND10O75800 440 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 RPSAP08865 295 aaKnown RBP5.89□□□□□ -1.47
SCN1A-209ENST00000635750 VCAM1P19320 739 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 ATP6V1C1P21283 382 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 ANXA11P50995 505 aaKnown RBP5.89□□□□□ -1.47
SCN1A-209ENST00000635750 TRIP4Q15650 581 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-209ENST00000635750 BBS7Q8IWZ6 715 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 RHOT2Q8IXI1 618 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 TMEM35BQ8NCS4 154 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 MRFAP1L1Q96HT8 127 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 BTBD6Q96KE9 485 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 GYG2O15488 501 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 PRMT3O60678 531 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 PLA2G4BP0C869 781 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 EIF2AK2P19525 551 aaKnown RBP5.89□□□□□ -1.47
SCN1A-209ENST00000635750 PDAP1Q13442 181 aaKnown RBP5.89□□□□□ -1.47
SCN1A-209ENST00000635750 KLHL38Q2WGJ6 581 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 CEP55Q53EZ4 464 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 ZNF658Q5TYW1 1059 aaPredicted RBP5.89□□□□□ -1.47
SCN1A-209ENST00000635750 TBCKQ8TEA7 893 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 TESK2Q96S53 571 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 FOXP3Q9BZS1 431 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 CARD9Q9H257 536 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 SMYD3Q9H7B4 428 aa5.89□□□□□ -1.47
SCN1A-209ENST00000635750 MAP3K19Q56UN5 1328 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 SYCP2Q9BX26 1530 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 CHUKO15111 745 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 CTNND1O60716 968 aaKnown RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 RNASEH1O60930 286 aaKnown RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 FYNP06241 537 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 CMA1P23946 247 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 CCDC142Q17RM4 750 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 FAM133AQ8N9E0 248 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 SPATA33Q96N06 139 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 RMDN3Q96TC7 470 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 VPS11Q9H270 941 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 TMEM60Q9H2L4 133 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 UTP6Q9NYH9 597 aaKnown RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 AKAP7Q9P0M2 348 aaPredicted RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 SYNGAP1Q96PV0 1343 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 CHRNA3P32297 505 aa5.88□□□□□ -1.47
SCN1A-209ENST00000635750 CRKLP46109 303 aaKnown RBP5.88□□□□□ -1.47
SCN1A-209ENST00000635750 ATXN3P54252 364 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms