RNA–Protein interactions for RNA: ENST00000635193.1

COL11A1-211, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL11A1, Length 5,289 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-211ENST00000635193 STRIP2Q9ULQ0 834 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 ERBB3P21860 1342 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 ZNF233A6NK53 670 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 GOLGA8CPA6NN73 597 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 WDR64B1ANS9 1081 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 INO80B-WBP1J3KQ70 363 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 CCDC22O60826 627 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 AGTP01019 485 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 KRT4P19013 534 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 GCLMP48507 274 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 ORC2Q13416 577 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-211ENST00000635193 CYTH1Q15438 398 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 RFFLQ8WZ73 363 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 SEPT8Q92599 483 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 HIC2Q96JB3 615 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 INO80BQ9C086 356 aaPredicted RBP12.43□□□□□ -0.42
COL11A1-211ENST00000635193 WNT8AQ9H1J5 351 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 ZFYVE16Q7Z3T8 1539 aa12.43□□□□□ -0.42
COL11A1-211ENST00000635193 USP42Q9H9J4 1324 aaKnown RBP12.42□□□□□ -0.42
COL11A1-211ENST00000635193 SPDYE16A6NNV3 312 aaPredicted RBP12.42□□□□□ -0.42
COL11A1-211ENST00000635193 NMT2O60551 498 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 GGPS1O95749 300 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 FTLP02792 175 aaPredicted RBP12.42□□□□□ -0.42
COL11A1-211ENST00000635193 FGFR4P22455 802 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 PMS1P54277 932 aaKnown RBP12.42□□□□□ -0.42
COL11A1-211ENST00000635193 SPDYE2Q495Y8 402 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 TMTC4Q5T4D3 741 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 ACBD5Q5T8D3 534 aaPredicted RBP12.42□□□□□ -0.42
COL11A1-211ENST00000635193 LRRC31Q6UY01 552 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 TTC13Q8NBP0 860 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 ATP6V1E2Q96A05 226 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 XPO6Q96QU8 1125 aaKnown RBP12.42□□□□□ -0.42
COL11A1-211ENST00000635193 TMEM47Q9BQJ4 181 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 GFAPP14136 432 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 SLC12A1Q13621 1099 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 HIC1Q14526 733 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 HNRNPLLQ8WVV9 542 aaKnown RBP12.42□□□□□ -0.42
COL11A1-211ENST00000635193 CHCHD3Q9NX63 227 aaKnown RBP12.42□□□□□ -0.42
COL11A1-211ENST00000635193 CCT8L1PA6NM43 557 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 DEAF1O75398 565 aaPredicted RBP12.42□□□□□ -0.42
COL11A1-211ENST00000635193 SCP2P22307 547 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 GUCY1A2P33402 732 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 PEX3P56589 373 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 DAB2P98082 770 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 CNGA3Q16281 694 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 SCARA5Q6ZMJ2 495 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 ACAD11Q709F0 780 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 SNRNP27Q8WVK2 155 aaKnown RBP12.42□□□□□ -0.42
COL11A1-211ENST00000635193 RNPC3Q96LT9 517 aaKnown RBP12.42□□□□□ -0.42
COL11A1-211ENST00000635193 CCDC90BQ9GZT6 254 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 PRDM4Q9UKN5 801 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 PSMD14O00487 310 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 SRGNP10124 158 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 NCAPHQ15003 741 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 ZBTB33Q86T24 672 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 GLYCTKQ8IVS8 523 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 ASCC2Q9H1I8 757 aaPredicted RBP12.42□□□□□ -0.42
COL11A1-211ENST00000635193 TRIM33Q9UPN9 1127 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 LRRC7Q96NW7 1537 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 NCAPD2Q15021 1401 aa12.42□□□□□ -0.42
COL11A1-211ENST00000635193 POTEB3A0JP26 581 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 USP17L5A8MUK1 530 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 POTECB2RU33 542 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 KRT8P05787 483 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 DPYDQ12882 1025 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 GRM1Q13255 1194 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 POTEBQ6S5H4 581 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 XXYLT1Q8NBI6 393 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 RAPGEF5Q92565 580 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 INTS2Q9H0H0 1204 aaKnown RBP12.41□□□□□ -0.42
COL11A1-211ENST00000635193 CPVLQ9H3G5 476 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 ANGPTL3Q9Y5C1 460 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 NLRP1Q9C000 1473 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 LPXNO60711 386 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 SEC24CP53992 1094 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 LAMB3Q13751 1172 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 FLOT2Q14254 428 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 PTGISQ16647 500 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 MTERF2Q49AM1 385 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 TMC4Q7Z404 712 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 ZC3H15Q8WU90 426 aaKnown RBP12.41□□□□□ -0.42
COL11A1-211ENST00000635193 RNF25Q96BH1 459 aaPredicted RBP12.41□□□□□ -0.42
COL11A1-211ENST00000635193 NAALADL2Q58DX5 795 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 ZBED8Q8IZ13 594 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 NOA1Q8NC60 698 aaKnown RBP12.41□□□□□ -0.42
COL11A1-211ENST00000635193 L2HGDHQ9H9P8 463 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 PALLDQ8WX93 1383 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 NCOA3Q9Y6Q9 1424 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 CCDC195A0A1B0GUA6 201 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 SNUPNO95149 360 aaKnown RBP12.41□□□□□ -0.42
COL11A1-211ENST00000635193 GRM4Q14833 912 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 ZNF746Q6NUN9 644 aaPredicted RBP12.41□□□□□ -0.42
COL11A1-211ENST00000635193 TRIM67Q6ZTA4 783 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 POLD4Q9HCU8 107 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 TMEM51Q9NW97 253 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 BARHL2Q9NY43 387 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 PDP2Q9P2J9 529 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 FHOD1Q9Y613 1164 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 PFASO15067 1338 aa12.41□□□□□ -0.42
COL11A1-211ENST00000635193 ABL1P00519 1130 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms