RNA–Protein interactions for RNA: ENST00000630499.2

SRRM2-231, Transcript of serine/arginine repetitive matrix 2, human

TSL 1 (best) BASIC

Gene SRRM2, Length 1,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-231	ENST00000630499	ALDH7A1	P49419	539 aa	Known RBP	24.96	■■□□□ 1.59
SRRM2-231	ENST00000630499	NPEPPS	P55786	919 aa		24.96	■■□□□ 1.59
SRRM2-231	ENST00000630499	SCRN1	Q12765	414 aa		24.96	■■□□□ 1.59
SRRM2-231	ENST00000630499	STK3	Q13188	491 aa		24.96	■■□□□ 1.59
SRRM2-231	ENST00000630499	FBXL6	Q8N531	539 aa		24.96	■■□□□ 1.59
SRRM2-231	ENST00000630499	FAM20A	Q96MK3	541 aa		24.96	■■□□□ 1.59
SRRM2-231	ENST00000630499	ADAM7	Q9H2U9	754 aa		24.96	■■□□□ 1.59
SRRM2-231	ENST00000630499	DHX33	Q9H6R0	707 aa	Known RBP	24.96	■■□□□ 1.59
SRRM2-231	ENST00000630499	AGPAT5	Q9NUQ2	364 aa		24.96	■■□□□ 1.59
SRRM2-231	ENST00000630499	PIN4	Q9Y237	131 aa	Known RBP	24.96	■■□□□ 1.59
SRRM2-231	ENST00000630499	VPS13A	Q96RL7	3174 aa		24.96	■■□□□ 1.59
SRRM2-231	ENST00000630499	CFAP54	Q96N23	3096 aa		24.96	■■□□□ 1.59
SRRM2-231	ENST00000630499	STK36	Q9NRP7	1315 aa		24.95	■■□□□ 1.58
SRRM2-231	ENST00000630499	GALT	P07902	379 aa		24.95	■■□□□ 1.58
SRRM2-231	ENST00000630499	QARS	P47897	775 aa	Known RBP	24.95	■■□□□ 1.58
SRRM2-231	ENST00000630499	SPIRE1	Q08AE8	756 aa		24.95	■■□□□ 1.58
SRRM2-231	ENST00000630499	TWF2	Q6IBS0	349 aa	Known RBP	24.95	■■□□□ 1.58
SRRM2-231	ENST00000630499	DDX53	Q86TM3	631 aa	Known RBP	24.95	■■□□□ 1.58
SRRM2-231	ENST00000630499	IGSF21	Q96ID5	467 aa		24.95	■■□□□ 1.58
SRRM2-231	ENST00000630499	INO80B	Q9C086	356 aa	Predicted RBP	24.95	■■□□□ 1.58
SRRM2-231	ENST00000630499	POMK	Q9H5K3	350 aa		24.95	■■□□□ 1.58
SRRM2-231	ENST00000630499	MINDY3	Q9H8M7	445 aa		24.95	■■□□□ 1.58
SRRM2-231	ENST00000630499	GJB4	Q9NTQ9	266 aa		24.95	■■□□□ 1.58
SRRM2-231	ENST00000630499	ZC3H11A	O75152	810 aa	Known RBP eCLIP	24.94	■■□□□ 1.58	5e-15	■■■□□ 16.9
SRRM2-231	ENST00000630499	CTSA	P10619	480 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	SKI	P12755	728 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	HOXA11	P31270	313 aa	Predicted RBP	24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	RAB27A	P51159	221 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	POLG	P54098	1239 aa	Predicted RBP	24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	ITIH3	Q06033	890 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	TCF15	Q12870	199 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	LETM2	Q2VYF4	491 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	NOMO2	Q5JPE7	1267 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	AGMO	Q6ZNB7	445 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	MRPL10	Q7Z7H8	261 aa	Known RBP	24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	VPS52	Q8N1B4	723 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	OXER1	Q8TDS5	423 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	SLC22A17	Q8WUG5	538 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	TMEM169	Q96HH4	297 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	NLRP4	Q96MN2	994 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	PHOX2B	Q99453	314 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	JPH2	Q9BR39	696 aa	Predicted RBP	24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	DNAJB4	Q9UDY4	337 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	COL4A3BP	Q9Y5P4	624 aa		24.94	■■□□□ 1.58
SRRM2-231	ENST00000630499	CTDNEP1	O95476	244 aa		24.93	■■□□□ 1.58
SRRM2-231	ENST00000630499	CXCL14	O95715	111 aa		24.93	■■□□□ 1.58
SRRM2-231	ENST00000630499	LONRF3	Q496Y0	759 aa		24.93	■■□□□ 1.58
SRRM2-231	ENST00000630499	TPRN	Q4KMQ1	711 aa		24.93	■■□□□ 1.58
SRRM2-231	ENST00000630499	EARS2	Q5JPH6	523 aa	Known RBP	24.93	■■□□□ 1.58
SRRM2-231	ENST00000630499	UBXN11	Q5T124	520 aa		24.93	■■□□□ 1.58
SRRM2-231	ENST00000630499	CPLX2	Q6PUV4	134 aa	Known RBP	24.93	■■□□□ 1.58
SRRM2-231	ENST00000630499	GLB1L	Q6UWU2	654 aa		24.93	■■□□□ 1.58
SRRM2-231	ENST00000630499	CATSPER4	Q7RTX7	472 aa		24.93	■■□□□ 1.58
SRRM2-231	ENST00000630499	NEK8	Q86SG6	692 aa		24.93	■■□□□ 1.58
SRRM2-231	ENST00000630499	FEZF2	Q8TBJ5	459 aa		24.93	■■□□□ 1.58
SRRM2-231	ENST00000630499	AUTS2	Q8WXX7	1259 aa		24.93	■■□□□ 1.58
SRRM2-231	ENST00000630499	PDRG1	Q9NUG6	133 aa		24.93	■■□□□ 1.58
SRRM2-231	ENST00000630499	PPME1	Q9Y570	386 aa		24.93	■■□□□ 1.58
SRRM2-231	ENST00000630499	TBX3	O15119	743 aa		24.92	■■□□□ 1.58
SRRM2-231	ENST00000630499	P4HB	P07237	508 aa	Known RBP	24.92	■■□□□ 1.58
SRRM2-231	ENST00000630499	GCFC2	P16383	781 aa	Known RBP	24.92	■■□□□ 1.58
SRRM2-231	ENST00000630499	SLC11A1	P49279	550 aa		24.92	■■□□□ 1.58
SRRM2-231	ENST00000630499	AFF1	P51825	1210 aa	Known RBP	24.92	■■□□□ 1.58
SRRM2-231	ENST00000630499	VCP	P55072	806 aa	Known RBP	24.92	■■□□□ 1.58
SRRM2-231	ENST00000630499	ZNF280B	Q86YH2	543 aa		24.92	■■□□□ 1.58
SRRM2-231	ENST00000630499	C4orf19	Q8IY42	314 aa		24.92	■■□□□ 1.58
SRRM2-231	ENST00000630499	PRPF31	Q8WWY3	499 aa	Known RBP	24.92	■■□□□ 1.58
SRRM2-231	ENST00000630499	NECTIN4	Q96NY8	510 aa		24.92	■■□□□ 1.58
SRRM2-231	ENST00000630499	TPCN1	Q9ULQ1	816 aa		24.92	■■□□□ 1.58
SRRM2-231	ENST00000630499	PCDHB2	Q9Y5E7	798 aa		24.92	■■□□□ 1.58
SRRM2-231	ENST00000630499	C2orf16	Q68DN1	1984 aa		24.91	■■□□□ 1.58
SRRM2-231	ENST00000630499	CARNS1	A5YM72	827 aa		24.91	■■□□□ 1.58
SRRM2-231	ENST00000630499	C2CD4D	B7Z1M9	353 aa		24.91	■■□□□ 1.58
SRRM2-231	ENST00000630499	PFKFB2	O60825	505 aa		24.91	■■□□□ 1.58
SRRM2-231	ENST00000630499	DTNB	O60941	627 aa		24.91	■■□□□ 1.58
SRRM2-231	ENST00000630499	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	CCDC194	A0A1B0GVG4	234 aa		24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	DDHD2	O94830	711 aa		24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	EPCAM	P16422	314 aa		24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	SP100	P23497	879 aa	Predicted RBP	24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	EPHA7	Q15375	998 aa		24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	PTPN14	Q15678	1187 aa		24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	KANK3	Q6NY19	840 aa		24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	SRGAP1	Q7Z6B7	1085 aa		24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	POTED	Q86YR6	584 aa		24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	SUGP1	Q8IWZ8	645 aa	Known RBP	24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	SLC7A3	Q8WY07	619 aa		24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	TNFRSF25	Q93038	417 aa		24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	TMEM143	Q96AN5	459 aa		24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	CEP170P1	Q96L14	293 aa		24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	LXN	Q9BS40	222 aa		24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	NR2E1	Q9Y466	385 aa		24.9	■■□□□ 1.58
SRRM2-231	ENST00000630499	FAM205C	A6NFA0	338 aa		24.89	■■□□□ 1.58
SRRM2-231	ENST00000630499	ZBTB39	O15060	712 aa		24.89	■■□□□ 1.58
SRRM2-231	ENST00000630499	LILRB3	O75022	631 aa		24.89	■■□□□ 1.58
SRRM2-231	ENST00000630499	RFC5	P40937	340 aa		24.89	■■□□□ 1.58
SRRM2-231	ENST00000630499	PTPN5	P54829	565 aa		24.89	■■□□□ 1.58
SRRM2-231	ENST00000630499	LAMTOR4	Q0VGL1	99 aa		24.89	■■□□□ 1.58
SRRM2-231	ENST00000630499	GIT2	Q14161	759 aa		24.89	■■□□□ 1.58
SRRM2-231	ENST00000630499	KIAA1841	Q6NSI8	718 aa		24.89	■■□□□ 1.58

Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms