RNA–Protein interactions for RNA: ENST00000628979.2

CIRBP-246, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2 BASIC

Gene CIRBP, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-246ENST00000628979 LPPQ93052 612 aa22.9■■□□□ 1.26
CIRBP-246ENST00000628979 CPB2Q96IY4 423 aa22.9■■□□□ 1.26
CIRBP-246ENST00000628979 FAM105AQ9NUU6 356 aa22.9■■□□□ 1.26
CIRBP-246ENST00000628979 RNF19AQ9NV58 838 aa22.9■■□□□ 1.26
CIRBP-246ENST00000628979 HCSTQ9UBK5 93 aa22.9■■□□□ 1.26
CIRBP-246ENST00000628979 EOMESO95936 686 aa22.89■■□□□ 1.25
CIRBP-246ENST00000628979 SSBP05455 408 aaKnown RBP eCLIP22.89■■□□□ 1.25
CIRBP-246ENST00000628979 RB1P06400 928 aa22.89■■□□□ 1.25
CIRBP-246ENST00000628979 MBTD1Q05BQ5 628 aa22.89■■□□□ 1.25
CIRBP-246ENST00000628979 POU5F1BQ06416 359 aa22.89■■□□□ 1.25
CIRBP-246ENST00000628979 NCBP1Q09161 790 aaKnown RBP22.89■■□□□ 1.25
CIRBP-246ENST00000628979 KCNK18Q7Z418 384 aa22.89■■□□□ 1.25
CIRBP-246ENST00000628979 PHF6Q8IWS0 365 aaKnown RBP eCLIP22.89■■□□□ 1.25
CIRBP-246ENST00000628979 HELQQ8TDG4 1101 aa22.89■■□□□ 1.25
CIRBP-246ENST00000628979 CASD1Q96PB1 797 aa22.89■■□□□ 1.25
CIRBP-246ENST00000628979 PNMA5Q96PV4 448 aa22.89■■□□□ 1.25
CIRBP-246ENST00000628979 C11orf84Q9BUA3 381 aaPredicted RBP22.89■■□□□ 1.25
CIRBP-246ENST00000628979 TMEM117Q9H0C3 514 aa22.89■■□□□ 1.25
CIRBP-246ENST00000628979 TYW1Q9NV66 732 aaKnown RBP22.89■■□□□ 1.25
CIRBP-246ENST00000628979 LMCD1Q9NZU5 365 aa22.89■■□□□ 1.25
CIRBP-246ENST00000628979 EYSQ5T1H1 3165 aa22.89■■□□□ 1.25
CIRBP-246ENST00000628979 TSPAN1O60635 241 aa22.88■■□□□ 1.25
CIRBP-246ENST00000628979 SKIP12755 728 aa22.88■■□□□ 1.25
CIRBP-246ENST00000628979 ATF7P17544 494 aaPredicted RBP22.88■■□□□ 1.25
CIRBP-246ENST00000628979 MARCKSP29966 332 aaPredicted RBP22.88■■□□□ 1.25
CIRBP-246ENST00000628979 HOXA11P31270 313 aaPredicted RBP22.88■■□□□ 1.25
CIRBP-246ENST00000628979 UBA7P41226 1012 aa22.88■■□□□ 1.25
CIRBP-246ENST00000628979 GRIN1Q05586 938 aa22.88■■□□□ 1.25
CIRBP-246ENST00000628979 PTPROQ16827 1216 aa22.88■■□□□ 1.25
CIRBP-246ENST00000628979 CLLU1OSQ5K130 101 aa22.88■■□□□ 1.25
CIRBP-246ENST00000628979 ZNF598Q86UK7 904 aaKnown RBP22.88■■□□□ 1.25
CIRBP-246ENST00000628979 BSNDQ8WZ55 320 aa22.88■■□□□ 1.25
CIRBP-246ENST00000628979 ZSCAN16Q9H4T2 348 aaPredicted RBP22.88■■□□□ 1.25
CIRBP-246ENST00000628979 ALG13Q9NP73 1137 aaKnown RBP22.88■■□□□ 1.25
CIRBP-246ENST00000628979 C5orf67F2Z3F1 127 aa22.87■■□□□ 1.25
CIRBP-246ENST00000628979 LIG1P18858 919 aa22.87■■□□□ 1.25
CIRBP-246ENST00000628979 IFNLR1Q8IU57 520 aaPredicted RBP22.87■■□□□ 1.25
CIRBP-246ENST00000628979 ZBTB8OSQ8IWT0 167 aa22.87■■□□□ 1.25
CIRBP-246ENST00000628979 RASSF8Q8NHQ8 419 aa22.87■■□□□ 1.25
CIRBP-246ENST00000628979 IFT74Q96LB3 600 aa22.87■■□□□ 1.25
CIRBP-246ENST00000628979 AK8Q96MA6 479 aa22.87■■□□□ 1.25
CIRBP-246ENST00000628979 PLVAPQ9BX97 442 aa22.87■■□□□ 1.25
CIRBP-246ENST00000628979 NT5C3AQ9H0P0 336 aa22.87■■□□□ 1.25
CIRBP-246ENST00000628979 PCDHB2Q9Y5E7 798 aa22.87■■□□□ 1.25
CIRBP-246ENST00000628979 TRANK1O15050 2925 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 GRM6O15303 877 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 LONP1P36776 959 aaKnown RBP22.86■■□□□ 1.25
CIRBP-246ENST00000628979 RAB27AP51159 221 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 HYIQ5T013 277 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 LRRC55Q6ZSA7 311 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 KLHL23Q8NBE8 558 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 DEPTORQ8TB45 409 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 PGBD4Q96DM1 585 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 MRPL38Q96DV4 380 aaKnown RBP22.86■■□□□ 1.25
CIRBP-246ENST00000628979 CALML4Q96GE6 196 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 RUSC1Q9BVN2 902 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 TRAIPQ9BWF2 469 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 NFKBIZQ9BYH8 718 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 CWH43Q9H720 699 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 AAASQ9NRG9 546 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 INPP5FQ9Y2H2 1132 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 PCDHB12Q9Y5F1 795 aa22.86■■□□□ 1.25
CIRBP-246ENST00000628979 MEIS3P2A8K0S8 358 aa22.85■■□□□ 1.25
CIRBP-246ENST00000628979 B4GALT5O43286 388 aa22.85■■□□□ 1.25
CIRBP-246ENST00000628979 AXLP30530 894 aa22.85■■□□□ 1.25
CIRBP-246ENST00000628979 RAD51AP2Q09MP3 1159 aa22.85■■□□□ 1.25
CIRBP-246ENST00000628979 PTPAQ15257 358 aa22.85■■□□□ 1.25
CIRBP-246ENST00000628979 PCBP1Q15365 356 aaKnown RBP eCLIP22.85■■□□□ 1.25
CIRBP-246ENST00000628979 TMEM132AQ24JP5 1023 aa22.85■■□□□ 1.25
CIRBP-246ENST00000628979 SPECC1Q5M775 1068 aa22.85■■□□□ 1.25
CIRBP-246ENST00000628979 UBXN11Q5T124 520 aa22.85■■□□□ 1.25
CIRBP-246ENST00000628979 RINT1Q6NUQ1 792 aa22.85■■□□□ 1.25
CIRBP-246ENST00000628979 NOTUMQ6P988 496 aa22.85■■□□□ 1.25
CIRBP-246ENST00000628979 CDR2LQ86X02 465 aaPredicted RBP22.85■■□□□ 1.25
CIRBP-246ENST00000628979 KIFAP3Q92845 792 aa22.85■■□□□ 1.25
CIRBP-246ENST00000628979 USP28Q96RU2 1077 aa22.85■■□□□ 1.25
CIRBP-246ENST00000628979 EIF2AQ9BY44 585 aaKnown RBP22.85■■□□□ 1.25
CIRBP-246ENST00000628979 C2orf40Q9H1Z8 148 aa22.85■■□□□ 1.25
CIRBP-246ENST00000628979 PLAGL2Q9UPG8 496 aa22.85■■□□□ 1.25
CIRBP-246ENST00000628979 HIP1RO75146 1068 aa22.84■■□□□ 1.25
CIRBP-246ENST00000628979 PLA2G4BP0C869 781 aa22.84■■□□□ 1.25
CIRBP-246ENST00000628979 ARF4P18085 180 aaPredicted RBP22.84■■□□□ 1.25
CIRBP-246ENST00000628979 PPP2R5AQ15172 486 aa22.84■■□□□ 1.25
CIRBP-246ENST00000628979 AMHR2Q16671 573 aa22.84■■□□□ 1.25
CIRBP-246ENST00000628979 TMEM119Q4V9L6 283 aa22.84■■□□□ 1.25
CIRBP-246ENST00000628979 LRRC43Q8N309 656 aa22.84■■□□□ 1.25
CIRBP-246ENST00000628979 COLGALT1Q8NBJ5 622 aa22.84■■□□□ 1.25
CIRBP-246ENST00000628979 KIFC3Q9BVG8 833 aa22.84■■□□□ 1.25
CIRBP-246ENST00000628979 CSRNP2Q9H175 543 aa22.84■■□□□ 1.25
CIRBP-246ENST00000628979 PRMT7Q9NVM4 692 aaPredicted RBP22.84■■□□□ 1.25
CIRBP-246ENST00000628979 CCDC169A6NNP5 214 aa22.83■■□□□ 1.25
CIRBP-246ENST00000628979 ZNF623O75123 536 aa22.83■■□□□ 1.25
CIRBP-246ENST00000628979 ITGB1P05556 798 aa22.83■■□□□ 1.25
CIRBP-246ENST00000628979 NAMPTP43490 491 aa22.83■■□□□ 1.25
CIRBP-246ENST00000628979 DHX8Q14562 1220 aaKnown RBP22.83■■□□□ 1.25
CIRBP-246ENST00000628979 KARSQ15046 597 aaKnown RBP22.83■■□□□ 1.25
CIRBP-246ENST00000628979 FOXD4L6Q3SYB3 417 aaPredicted RBP22.83■■□□□ 1.25
CIRBP-246ENST00000628979 CDCA2Q69YH5 1023 aaPredicted RBP22.83■■□□□ 1.25
CIRBP-246ENST00000628979 GLB1LQ6UWU2 654 aa22.83■■□□□ 1.25
CIRBP-246ENST00000628979 FOXD4L3Q6VB84 417 aaPredicted RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms