RNA–Protein interactions for RNA: ENST00000628090.1

LINC01943-202, Transcript of long intergenic non-protein coding RNA 1943, humanhuman

TSL 5 BASIC

Gene LINC01943, Length 926 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01943-202ENST00000628090 SHHQ15465 462 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 LY6KQ17RY6 165 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 MTERF2Q49AM1 385 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 C9orf50Q5SZB4 431 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 UTP14CQ5TAP6 766 aaKnown RBP11.12□□□□□ -0.63
LINC01943-202ENST00000628090 IQSEC1Q6DN90 963 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 MAMDC4Q6UXC1 1216 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 EPM2AIP1Q7L775 607 aaPredicted RBP11.12□□□□□ -0.63
LINC01943-202ENST00000628090 PLPPR4Q7Z2D5 763 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 ZNF720Q7Z2F6 126 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 TRMT1LQ7Z2T5 733 aaKnown RBP11.12□□□□□ -0.63
LINC01943-202ENST00000628090 USP37Q86T82 979 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 LRRC8AQ8IWT6 810 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 RETREG2Q8NC44 543 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 SCFD1Q8WVM8 642 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 NAP1L5Q96NT1 182 aaPredicted RBP11.12□□□□□ -0.63
LINC01943-202ENST00000628090 DUSP9Q99956 384 aaKnown RBP11.12□□□□□ -0.63
LINC01943-202ENST00000628090 LBHD1Q9BQE6 289 aaPredicted RBP11.12□□□□□ -0.63
LINC01943-202ENST00000628090 NIFKQ9BYG3 293 aaKnown RBP11.12□□□□□ -0.63
LINC01943-202ENST00000628090 GBP3Q9H0R5 595 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 KMT5AQ9NQR1 393 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 PDLIM7Q9NR12 457 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 MTMR10Q9NXD2 777 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.12□□□□□ -0.63
LINC01943-202ENST00000628090 ZHX1Q9UKY1 873 aaPredicted RBP11.12□□□□□ -0.63
LINC01943-202ENST00000628090 ZNF215Q9UL58 517 aaPredicted RBP11.12□□□□□ -0.63
LINC01943-202ENST00000628090 PCDHA2Q9Y5H9 948 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 TTC28Q96AY4 2481 aa11.12□□□□□ -0.63
LINC01943-202ENST00000628090 A0A1W2PQ45 241 aaPredicted RBP11.11□□□□□ -0.63
LINC01943-202ENST00000628090 A0A1W2PQY0 241 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 SFI1A8K8P3 1242 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 RSPH10B2B2RC85 870 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 ZBTB39O15060 712 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 SORBS3O60504 671 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 PRPF6O94906 941 aaKnown RBP11.11□□□□□ -0.63
LINC01943-202ENST00000628090 RSPH10BP0C881 870 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 MYBP10242 640 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 AKR1A1P14550 325 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 NR2F2P24468 414 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 PSMC2P35998 433 aaKnown RBP11.11□□□□□ -0.63
LINC01943-202ENST00000628090 ACLYP53396 1101 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 PMS1P54277 932 aaKnown RBP11.11□□□□□ -0.63
LINC01943-202ENST00000628090 EPHB4P54760 987 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 SP2Q02086 613 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 STRN3Q13033 797 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 KCNA10Q16322 511 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 NFIL3Q16649 462 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 UGCGQ16739 394 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 CCDC144BQ3MJ40 725 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 VWA3BQ502W6 1294 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 TMEM63BQ5T3F8 832 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 CCSAPQ6IQ19 270 aaPredicted RBP11.11□□□□□ -0.63
LINC01943-202ENST00000628090 MAEAQ7L5Y9 396 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 FRMD5Q7Z6J6 570 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 RNF180Q86T96 592 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 CCDC60Q8IWA6 550 aaPredicted RBP11.11□□□□□ -0.63
LINC01943-202ENST00000628090 FBXO16Q8IX29 292 aaPredicted RBP11.11□□□□□ -0.63
LINC01943-202ENST00000628090 KLHDC9Q8NEP7 349 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 MED15Q96RN5 788 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 NAA15Q9BXJ9 866 aaKnown RBP11.11□□□□□ -0.63
LINC01943-202ENST00000628090 KATNBL1Q9H079 304 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 ST6GALNAC4Q9H4F1 302 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 ZNHIT6Q9NWK9 470 aaKnown RBP11.11□□□□□ -0.63
LINC01943-202ENST00000628090 WRAP73Q9P2S5 460 aaPredicted RBP11.11□□□□□ -0.63
LINC01943-202ENST00000628090 PRKAG2Q9UGJ0 569 aa11.11□□□□□ -0.63
LINC01943-202ENST00000628090 ARMCX3Q9UH62 379 aaPredicted RBP11.11□□□□□ -0.63
LINC01943-202ENST00000628090 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.11□□□□□ -0.63
LINC01943-202ENST00000628090 SPTBN5Q9NRC6 3674 aaKnown RBP11.11□□□□□ -0.63
LINC01943-202ENST00000628090 ASTN1O14525 1302 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 EMSYQ7Z589 1322 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 IGKV6D-21A0A0A0MT36 114 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 MAP3K13O43283 966 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 PQBP1O60828 265 aaKnown RBP11.1□□□□□ -0.63
LINC01943-202ENST00000628090 NR3C1P04150 777 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 SKILP12757 684 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 KRT13P13646 458 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 NMT1P30419 496 aaKnown RBP11.1□□□□□ -0.63
LINC01943-202ENST00000628090 PEX3P56589 373 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 CETN1Q12798 172 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 EMC2Q15006 297 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 C1orf53Q5VUE5 145 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 PLA2G4FQ68DD2 849 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 GPR153Q6NV75 609 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 ANO5Q75V66 913 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 SPIRE2Q8WWL2 714 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 FAM161BQ96MY7 647 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 GPR20Q99678 358 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 MKNK1Q9BUB5 465 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 KCTD10Q9H3F6 313 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 NDST4Q9H3R1 872 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 ERAP1Q9NZ08 941 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 TRPC6Q9Y210 931 aa11.1□□□□□ -0.63
LINC01943-202ENST00000628090 LTBP2Q14767 1821 aa11.09□□□□□ -0.63
LINC01943-202ENST00000628090 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.09□□□□□ -0.63
LINC01943-202ENST00000628090 GSTTP1A0A1W2PQM5 241 aa11.09□□□□□ -0.63
LINC01943-202ENST00000628090 RBM47A0AV96 593 aaKnown RBP11.09□□□□□ -0.63
LINC01943-202ENST00000628090 KIAA0391O15091 583 aaKnown RBP11.09□□□□□ -0.63
LINC01943-202ENST00000628090 HBP1O60381 514 aa11.09□□□□□ -0.63
LINC01943-202ENST00000628090 STX10O60499 249 aa11.09□□□□□ -0.63
LINC01943-202ENST00000628090 DUSP11O75319 330 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms